>ID=gene:ENSRNA049477896;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=178283;repeat_name=EnSpm-4_HV;repeat_type=Type II Transposons::Scaffold29859:14798-14799(-)
G
>ID=gene:ENSRNA049476643;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2202269;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::Scaffold87297:11772-11871(-)
CTTTGGGGACATCCGATAAAATCGGAATGATAGAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACATGCACAAATCGAGAAATGGTCCAATTTTTT
>ID=gene:ENSRNA049476635;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2202268;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::Scaffold87297:10610-10713(-)
GTCCCTTTGGGGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCAGAAGGATGACACGCACAAATCGAGAAATGGTCCAATTTTTT
>ID=gene:ENSRNA049476565;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2202255;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::Scaffold120442:1696-1799(-)
GTCCCTTCGGGGACTTCTGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCCAGGATGACCCGCACAAATCGAGAAATGGTCCAATTTTTT
>ID=gene:ENSRNA049476556;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2202256;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::Scaffold120442:2855-2958(-)
GTCCCTTCGGGGACATCTGATAAAATTGGAATGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTTCAATTTTTT
>ID=gene:ENSRNA049476436;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2202262;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::Scaffold137589:5092-5171(+)
ATTGGAATGATACAGAGAATATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGATATGGTCCAATTTGTT
>ID=gene:ENSRNA049476432;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2202261;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::Scaffold137589:4068-4149(+)
AAAGTGGAACGATACAGAGAAGATTAGCCTGGCCCTTGCACAAGGATGACACGCACAAATTGAGAAATGGTCCAATTTTTT
>ID=gene:ENSRNA049476426;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2202259;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::Scaffold137589:1671-1773(+)
TCCCTTCGGGGACATCCGATAAAATTGGAATGATACAGAGAATATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGATATGGTCCAATTTGTT
>ID=gene:ENSRNA049476415;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2202265;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::Scaffold137589:8559-8656(+)
TTGGGGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTT
>ID=gene:ENSRNA049476400;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2202260;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::Scaffold137589:2832-2935(+)
GTCCCTTTGGGGACATCCGATAAAATTGGAACGATATAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGGACAAATCGAGATACGGTCCAATTTTTT
>ID=gene:ENSRNA049475687;Name=U5;biotype=snRNA;description=U5 spliceosomal RNA overlaps with ID=2243675;repeat_name=LTR_Gm_14_4511;repeat_type=LTRs::Scaffold32441:9079-9177(-)
AGCTGCGTGGTGAGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCACGCTACACTAAGCAGCATACCCTAATTTTTGAAGGG
>ID=gene:ENSRNA049475681;Name=U5;biotype=snRNA;description=U5 spliceosomal RNA overlaps with ID=2243676;repeat_name=LTR_Gm_14_4511;repeat_type=LTRs::Scaffold32441:20131-20229(-)
AGCTGCGTGGTGAGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCACGCCACACTAAGCAGCATACCCTAATTTTTGAAGGG
>ID=gene:ENSRNA049466199;Name=U1;biotype=snRNA;description=U1 spliceosomal RNA overlaps with ID=2240829;repeat_name=LTR_Gm_08_2830;repeat_type=LTRs::Scaffold8738:13312-13473(+)
ATACTTACCTGGACAGGGTTGACGGCTGATCAAGAAGGGCCGTGGCCTAGATCAATGGCTCACAATGCACTTGGTGAGTGCGTTGATCTACCATCTTCCCAAGTGGAAGAATGGACGTCATAATTTATGGTAGAGGGGGTACGCGTTCGCGCGGCCCCTGC
>ID=gene:ENSRNA049466185;Name=U1;biotype=snRNA;description=U1 spliceosomal RNA overlaps with ID=2240830;repeat_name=LTR_Gm_08_2830;repeat_type=LTRs::Scaffold8738:27636-27793(+)
TTACTTACCTGGACGGGGTTGACGGCTGATCAAGAACTATCGTGGCCTAGATCAATGGCTCATATTGCATCTGGTGAGTGCGTTGATCTACCGTCTCTCCAAATGGGAGGGTGGACGTTTTAATTTGTGGTACCTGGGATACGCCTTAGCGTGGCCC
>ID=gene:ENSRNA049463652;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=355047;repeat_name=DTC_Clifford_3B_080_N22-1;repeat_type=Type II Transposons::Scaffold40729:12859-12865(-)
GTCCCT
>ID=gene:ENSRNA049463417;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2202252;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::Scaffold93572:41252-41355(+)
GTCCCTTCGGGGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACACACAAATCAAGAAATGGTCCAAATTTTT
>ID=gene:ENSRNA049455456;Name=U1;biotype=snRNA;description=U1 spliceosomal RNA overlaps with ID=1931460;repeat_name=trep804;repeat_type=Type I Transposons/LINE::Scaffold34564:34883-34923(-)
ATATAAAGCCGGACGCTTCTAGCGTCTTTCTTCTAAAAAA
>ID=gene:ENSRNA049454218;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=154130;repeat_name=THALOS_AT;repeat_type=Type II Transposons::Scaffold79377:15529-15562(-)
TACTCCCTCTGTTCCTAAATATTTGTCTTTTTA
>ID=gene:ENSRNA049453807;Name=U5;biotype=snRNA;description=U5 spliceosomal RNA overlaps with ID=2243673;repeat_name=LTR_Gm_14_4511;repeat_type=LTRs::Scaffold26473:52034-52154(-)
AGCTGCGTGGTGGGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCACGCCACACATGTGCAGCATACTCTAATTTTTAAAGGGTGGCCTCCTCTCTTTTGAGGG
>ID=gene:ENSRNA049452149;Name=U4;biotype=snRNA;description=U4 spliceosomal RNA overlaps with ID=295458;repeat_name=LTR_AC207940.1_144;repeat_type=LTRs::Scaffold17977:11621-11743(-)
TGGTTGAAAACTACTCCCTCCGTTCCGAATTACTCCTAGTGTAAACTAATATAAGAGTGTTTAGATTACTAAAGTAGTGATCTAAACACTCTTATATTAGTTTACGGAGGGGGTACTTGTTT
>ID=gene:ENSRNA049451785;Name=U5;biotype=snRNA;description=U5 spliceosomal RNA overlaps with ID=2243674;repeat_name=LTR_Gm_14_4511;repeat_type=LTRs::Scaffold160512:36765-36847(+)
AGCTGTGTGGTGAGCACAAAGCGAGCTATTCTTTCGCCTTTTACTAAAGAATACCGTGTAGACGTCACAATGAGCAGCATAC
>ID=gene:ENSRNA049449742;Name=U1;biotype=snRNA;description=U1 spliceosomal RNA overlaps with ID=1087832;repeat_name=RLC_TAR2_3B_028_J09-1;repeat_type=LTRs::Scaffold20532:56033-56045(+)
ATATTTCCAACA
>ID=gene:ENSRNA049449263;Name=U1;biotype=snRNA;description=U1 spliceosomal RNA overlaps with ID=2240833;repeat_name=LTR_Gm_08_2830;repeat_type=LTRs::C141461244:1041-1203(-)
TTACTTACCTGGACGGGGTCTATGGGTGATCAATAAGGCTCATGGCCTAGATCAATGGCTCACATTGCACTCGGTGAGAGTATTGATCTACCATCTCCCCTTTGTGGGAGAGTGGACGTTGTAATTTGTGATTGAGGGTGTACGCGTTCGCGCGGCCCCTGC
>ID=gene:ENSRNA049448316;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2202281;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::Scaffold221745:1336-1438(+)
TCCCTTCTGGGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCACAAGGATGACAAGCACAAATCGAGAAATGGTCCAATTTTTT
>ID=gene:ENSRNA049448324;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2202280;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::Scaffold221745:173-276(+)
GTCCCTTCTGGGACATCCGATAAAATTGGAACGATACAGAGAATATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAATTTTTT
>ID=gene:ENSRNA049477668;Name=U1;biotype=snRNA;description=U1 spliceosomal RNA overlaps with ID=2240834;repeat_name=LTR_Gm_08_2830;repeat_type=LTRs::C141424736:523-684(-)
TTACTTACCTGGACGGGGTCGACGGCCGATCAAGAAGGGTCGTGGCCTAGGTCAATGACTTGTATTGCACTTGGTGAGCACGTTGACCTATCATCTCCCCTCGTGGGAGAGTGAACGTCATAATTTGTGATAGAGGAGGTACGCGTTCGCGCGGCCTCTGC
>ID=gene:ENSRNA049477377;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2202278;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::C140946502:346-448(-)
TCCCTTCGGGGACATCCGATAAAATTGGAATGATACAGAGAATATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGATATGGTCCAATTTGTT
>ID=gene:ENSRNA049476648;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2202270;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::Scaffold87297:14021-14120(-)
CTTTGGGGACATCCGATAAAATTGGAACAATGCGGAGAAGATTAGCATGGCCCCTGCGCAAGGCTGACACGCACACATCGAGAAATCGTCCAAATTTTT
>ID=gene:ENSRNA049476638;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2202267;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::Scaffold87297:9492-9595(-)
GTCCCTTCGGGGACATCTGATAAAATTGGAACGATACATAGAAGATTAGCATGGCCCCTGCGCAAGGATGACATGCACAAATCAAGAAATGGTCCAATTTTTT
>ID=gene:ENSRNA049476561;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2202257;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::Scaffold120442:4016-4119(-)
GTCCCTTCGGGGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCAAGAAATGGTGCAATTTTTT
>ID=gene:ENSRNA049476429;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2202264;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::Scaffold137589:7398-7494(+)
TCGGGACATCCGATAAAATTGGAACGATGCGGAGCAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTGTT
>ID=gene:ENSRNA049476422;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2202258;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::Scaffold137589:201-304(+)
GTCCCTTTGGGGGCATCCGATAAAATTGGAACGATACAGAGAAGATTAGCCTGGCCCTTGCACAAGGATGACACGCACAAATTGAGAAATGGTCCAATTTTTT
>ID=gene:ENSRNA049476407;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2202263;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::Scaffold137589:6230-6333(+)
GTCCCTTTGGGGACATCGGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGAGACGCACAAATCGAGAAATGGTCCAAATTATT
>ID=gene:ENSRNA049476395;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2202266;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::Scaffold137589:9715-9818(+)
GTCCCTTTGGGGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATATTT
>ID=gene:ENSRNA049447403;Name=U1;biotype=snRNA;description=U1 spliceosomal RNA overlaps with ID=2184387;repeat_name=MITE_barke_1_48094_EnSpm2_HV;repeat_type=Type II Transposons::Scaffold4302:10506-10507(-)
G
>ID=gene:ENSRNA049447310;Name=U1;biotype=snRNA;description=U1 spliceosomal RNA overlaps with ID=1644110;repeat_name=trep2224;repeat_type=LTRs::Scaffold37354:56993-56999(+)
TAACTT
>ID=gene:ENSRNA049479711;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=2210347;repeat_name=LTR_Al_scaffold_0003_560;repeat_type=LTRs::Scaffold2102:176498-176661(+)
TTGTGAAATGACTAGTTGTAGGATAAGTGGGAGCCCTCACGGGCGCAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGGGTCGGAAGCGGGGCATGTCCCCTCCTTTTGGCTCCAAGGCCCGGTCTTACCGGGCCGATCCGGGCGGAAGAC
>ID=gene:ENSRNA049479690;Name=5_8S_rRNA;biotype=rRNA;description=5.8S ribosomal RNA overlaps with ID=2210345;repeat_name=LTR_Al_scaffold_0003_560;repeat_type=LTRs::Scaffold2102:143111-143267(+)
GACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATACGATACCTGGTGTCAATTGCAGAATCCCGCGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCCACTCGGCCGAAGGCACGCCTGCCTGGGCATCA
>ID=gene:ENSRNA049479655;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=2210346;repeat_name=LTR_Al_scaffold_0003_560;repeat_type=LTRs::Scaffold2102:175112-175528(+)
TAGATAGATTGGGGACGCGACGTCCTCGACCTATTCTCAAACTTTAAATAGGTAGGATGGCGCGGCTGCTTCGGTGAGCCATGCCACGGAATCGGGTGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCCAACTGCGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGATTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTGAAGCGCGCGACCCACACCCGGCCATCTGGGCGAGCGCCATGCCCCGATGAGTAGGAGGGCGCGGCGGCCGCTGCAAAACCCGGGGCGCGAGCCCGGGCGGAGCGGCC
>ID=gene:ENSRNA049479645;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1779466;repeat_name=RLG_Fatima_3B_046_D24-4;repeat_type=LTRs::Scaffold2102:110500-110560(-)
AGGGAGTCCTGGATTAGGGGGTATCCGGATAGCTGGACTATATACCTTGGCCGGACTGAT
>ID=gene:ENSRNA049479148;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2115894;repeat_name=LTR_HVVMRXALLmA0294L17_ipk25_c2_3578;repeat_type=LTRs::Scaffold79880:3432-3506(+)
GGATCCCATTAGAATTCCGAAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGATGACCTCCTGGGAAGT
>ID=gene:ENSRNA049479129;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2115897;repeat_name=LTR_HVVMRXALLmA0294L17_ipk25_c2_3578;repeat_type=LTRs::Scaffold79880:6453-6539(+)
GATCCCATCAGAACTCCGAAGTTAAGCTTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTGCTGGGAAGTCCTCGGGTTGCAT
>ID=gene:ENSRNA049479126;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2115898;repeat_name=LTR_HVVMRXALLmA0294L17_ipk25_c2_3578;repeat_type=LTRs::Scaffold79880:6870-6944(+)
GGATCCCATCAGAACTCTGAAGTTAAGCATGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGT
>ID=gene:ENSRNA049479106;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2115899;repeat_name=LTR_HVVMRXALLmA0294L17_ipk25_c2_3578;repeat_type=LTRs::Scaffold79880:7763-7838(+)
GGATCCCATCAGAACTCCGAAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGATGACCTCCTGGTAAGTT
>ID=gene:ENSRNA049479094;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2115896;repeat_name=LTR_HVVMRXALLmA0294L17_ipk25_c2_3578;repeat_type=LTRs::Scaffold79880:5598-5672(+)
GGATCCCATCAGAACTCCGAAGTTAAGCGTGCTTGGTCGAGAGTAGTACTAGGATGGATGACCTCCTGGGAAGT
>ID=gene:ENSRNA049478454;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2084476;repeat_name=trep3125;repeat_type=LTRs::C135648261:26-118(+)
AAAACTAGCCAGTCCCATGGGTATGAAACCCATTTGAACGAGAGTAGTACTAGGATGGGTGACCTCCTCGGAAGTCCTCGGGAAAGGGTTTC
>ID=gene:ENSRNA049478340;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2084463;repeat_name=trep3125;repeat_type=LTRs::Scaffold24079:13280-13371(-)
AAAACTAGCCAGTCCTTTGGGTATGAAACCCATTTGGGCAAGAGTAGTACTAGGATGGATGACCTCCTGTGAAGTCCTCATGCAAGGGTTT
>ID=gene:ENSRNA049478298;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=2131804;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold73144:12078-12191(-)
GGGGAGTACGGTCGCAAGACCGAAACTCAAAGGAATTGGCGGGGGCCTGCACAAGCGGTGGAGCATGTGGTTTAATTCGATACAACGCGCAAAACCTTACCAGCCCTTGACAT
>ID=gene:ENSRNA049478117;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2084462;repeat_name=trep3125;repeat_type=LTRs::Scaffold77162:11357-11449(-)
AAAACTAGCCAGTCCTTTGGGTATGAAACCCATTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGAAAGGGTTTC
>ID=gene:ENSRNA049477856;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1996950;repeat_name=LTR_AC216582.1_214;repeat_type=LTRs::Scaffold21511:19619-19649(-)
CGGGTCATACCGCGGGGTATATCCCTGACA
>ID=gene:ENSRNA049477725;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=642805;repeat_name=DTC_Pavel_3B_034_E06-1;repeat_type=Type II Transposons::Scaffold2984:48056-48454(-)
AAAATGCCTTTGTTGGCTGTCATTATTCGAGTGCGCCTTCTCTCAAAATGGTCACGAAAAATACCACAGCATGTCGGGTGCCATTCCATGATAGCATGCCAAGTTTCATGAATTTCAGACGAGTTTTAGATTTACTAGAATTTAAAAACAAAGTATCTCATCGTTTTGCCGAGAATCAACGGTGCCCTGGTGTTTGAAATTCATTCCCATTTCTTGAATGGGACCTAAGCATGCACCCAAGGACACAGATTTGATTTTTCAACCAATTTATATGCACTGGAGCATGTGCATGTAGTTCGAATTTGAATTCTGCACATAAATGCATTGAAAACTCAGTTAATGCATAAAGATGTCCAAACGGACCCCGAAAAATCACAAAAATTGACACAACACTCCTG
>ID=gene:ENSRNA049477725;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1184374;repeat_name=DTC_Pavel_3B_063_D03-2;repeat_type=Type II Transposons::Scaffold2984:47877-47884(-)
TGTTGTT
>ID=gene:ENSRNA049476667;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1372572;repeat_name=RLG_Fatima_3B_068_B08-3;repeat_type=LTRs::Scaffold19016:6593-6668(-)
CCTATCATCTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCG
>ID=gene:ENSRNA049476660;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1790807;repeat_name=LTR_HVVMRX83khA0140C02_v78_c1_967;repeat_type=LTRs::Scaffold45924:12535-12666(+)
TGTGGCACCCCGGCTCAGAGAAACCGGAACGCCCCGTATTCCAGCCCAGAGATCGAGGAGAAGTCTTCTGGAATACGGCATTGCTTAGCATAGAACAAATCAGCTCTTTATTAAAATCTATATGGGTACAA
>ID=gene:ENSRNA049476660;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1790808;repeat_name=LTR_HVVMRX83khA0140C02_v78_c1_967;repeat_type=LTRs::Scaffold45924:12870-12958(+)
CCTACAAACTGGCATGACACGCCAGGTCAGTACATTGAATGTACTTGCAAGCTCACAGCAACCAAAGCAATCAAGACAAGCAATAGCA
>ID=gene:ENSRNA049476660;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1790809;repeat_name=LTR_HVVMRX83khA0140C02_v78_c1_967;repeat_type=LTRs::Scaffold45924:13439-13634(+)
CCGCGGGCGCGGCTATCGATAGATTAAACGCACACTCTGCAGAGGTTAGCACACTGTACCCACACCACGGAACCCATGGTCTCGCACTCCCATACGTGCGGACACGACGTTCTGACAAAACCGACCTACTGCCATGACACTCTCCCGGCCACTCCGACAAGCTCCCCTTTGGGCTAAGTCCTGGGTAGCTATGCG
>ID=gene:ENSRNA049476657;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=108561;repeat_name=Angela1_AT_LTR;repeat_type=LTRs::Scaffold45924:8042-8043(+)
A
>ID=gene:ENSRNA049475874;Name=5_8S_rRNA;biotype=rRNA;description=5.8S ribosomal RNA overlaps with ID=893954;repeat_name=trep2261;repeat_type=LTRs::Scaffold26404:2410-2534(+)
GACGAAACCCGCCGCCCGAAATGCGATACCTGGTGTGAATTGCAGAATCCCGCGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGACACTCGGCCGAGGGCACGCCTGCCTGGGCGTCA
>ID=gene:ENSRNA049474937;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1870658;repeat_name=RLX_Ginger_3B_102_N04-1;repeat_type=LTRs::Scaffold95140:17784-17813(+)
ACGGGAGGGCGTGGGAACACGACGAGCTA
>ID=gene:ENSRNA049474390;Name=5_8S_rRNA;biotype=rRNA;description=5.8S ribosomal RNA overlaps with ID=2210349;repeat_name=LTR_Al_scaffold_0003_560;repeat_type=LTRs::Scaffold40406:10870-11026(+)
GACTCTTGGCAACGAATATCTCGGCTCTTGCATCGATGAAGAATGTAGCGAAATGCGATAGCTGGTGTGAATTGTAGAATCCCGCGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCCACTCGGCCGAGGGAACGCCTGCCTGGGCGTCA
>ID=gene:ENSRNA049474376;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=2210352;repeat_name=LTR_Al_scaffold_0183_279;repeat_type=LTRs::Scaffold40406:9120-10280(+)
TACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGCAAGTATGAACCAATTTGAACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTACGTGTTACTCGGATAACCATAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGCGAGGGGCGCATTTATTAGATAAAAGGCTGACGCGGGCTCTGCTCGCTAATCCGATGATTCATGATAACTCGACGGATCGCACGACCTTCGTGCCGGCGATGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCGTGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATACTGACAAGGGGAGGTAGTGACAATAAATAACAATACCGGGCGCATTAGTGTCTGGTAATTGGAATGAGTACAATCTCAATCCCTTAACGAGGATCCATTGGAGGGCAAGTTTAGTGCCCGCAGCCGTAGTAATTCCAGCTCCAATAGTGTATATTTAAGTTGTTGAAGTTAAAAAGCTCGTAGTTGGACCTTGGGCCGGGTCGGCCGGTCCGCCTCACCGCGAGCACCGACCTACTCGACCCTTCGGCCGGCATCGCGCTCCTAGCTTTAATTGGCCGGGTCGTGTTTCCGGAATCGTTACTTTGAAGAAATTAGAGTTCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGATTCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCAAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGTTCGAAGACGATCAGATACCATCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTGCTTATAGGACTCTGCCGACACCTTATGAGAAATCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCACAAGGCTAAAACTTAAAGGAATTGACGGAAGGGC
>ID=gene:ENSRNA049473268;Name=5_8S_rRNA;biotype=rRNA;description=5.8S ribosomal RNA overlaps with ID=2246148;repeat_name=TXX_Gr_DX403825.1_7641;repeat_type=Unknown::Scaffold42632:5404-5558(+)
CTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACCTGGTGTGAATTGCAGAATCCCGCGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCCACTCGGCAGAGGGCACGCCTGCCTGGGCGTCA
>ID=gene:ENSRNA049472518;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2000062;repeat_name=LTR_HVVMRX83KhA0124C05_v56_c1_404;repeat_type=LTRs::Scaffold19648:179042-179074(-)
AAAACTAGCCAGTCCCATGGGTATGAAACCCA
>ID=gene:ENSRNA049472344;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2084439;repeat_name=trep3125;repeat_type=LTRs::Scaffold24104:40018-40110(-)
AAAACTAGCCAGTCCTTTGGGTATGAAACCCATTTGGACGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGAAAGGGTTTC
>ID=gene:ENSRNA049471052;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1132886;repeat_name=RLG_Cereba_3B_100_L17-6;repeat_type=LTRs::Scaffold11600:50117-50124(-)
AAGTTGT
>ID=gene:ENSRNA049471052;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1937636;repeat_name=HRSiTERTOOT00001;repeat_type=LTRs::Scaffold11600:49740-49784(-)
ATTTGCCATGACACCCGCCACCACCACCACTTGTTAGTAGTCTG
>ID=gene:ENSRNA049471052;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1187611;repeat_name=LTR_AC200767.1_4;repeat_type=LTRs::Scaffold11600:49740-49767(-)
CCACCACCACCACTTGTTAGTAGTCTG
>ID=gene:ENSRNA049470738;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=838490;repeat_name=DTC_unnamedfam48_3B_053_M11-1;repeat_type=Type II Transposons::Scaffold4613:142575-142602(+)
ACGGTTCAGTCAGACTAATCTCGTGTG
>ID=gene:ENSRNA049469935;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2084442;repeat_name=trep3125;repeat_type=LTRs::Scaffold55775:106483-106574(+)
AAAACTAGCCAGTCCTTTGGGTATGAAACCCATTTGGACGAGAGTAGTATTAGGATGGATGACCTCCTGGAAAGTCCTCGTGAAAGTATTT
>ID=gene:ENSRNA049469606;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1064961;repeat_name=RLG_Latidu_3B_068_J02-2;repeat_type=LTRs::Scaffold1206:158444-158781(+)
GCTATGCGGAGCCATGCCCGGTGCCGGCGCCCATCTGCACTGCTCGACCCTCTCCTGGGTCGGGCGCTCGCATCGCCCAGTGCTCGCATCCCCCGTGCCCGTAACCGCTATGGCTTTTGGCCCGTTGACAGCCGGGGTCCAGCCCGCAGAACATATAAAAAAAGGAATAAAAAATGTGTTAAAATAAATAAATCAGTAATTAATTAATTAATGAATTAATTAAGTTAATTAATCCTATTTAATTAATCTAATTAACCAGTTGGTTTAATTAAACAGTAATTAGATTAGCTAAATCCTAATTAACCTAAACAGAGTATGACAGGTGGGTCCCGCACGT
>ID=gene:ENSRNA049468631;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1221506;repeat_name=RLG_Erika_3B_035_C19-1;repeat_type=LTRs::Scaffold17397:12818-12888(+)
CCACAATGCGGTTATGCCTCTAAGTCATGCATCGACACGTGGGAGATATAGCCGCATCGTGGGCGTTACA
>ID=gene:ENSRNA049467964;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2017371;repeat_name=sabrina_115G1-1;repeat_type=LTRs::Pt:98390-98507(+)
TCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAATTTGGTGGTTAAACTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTGCGGCAAAATAGCTCGATGCCAGAA
>ID=gene:ENSRNA049467551;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1189357;repeat_name=trep4210;repeat_type=LTRs::Scaffold879:19176-19414(+)
TTCAAGAGACGGAGTTCGACACAAGACAGCATGGCTTGGAGGAGTGGAGTCAAACTTGAATCTTTCAGTGAAGCCATCGTCTTGAAGATCTGCTTCAACACTCAGCAATGTCAAACTCTTCCAGGACCTCCGACAGGTTTCATGTGTAACAAAGGCATTCTTGGTGGCAAGATTGCGAATGTGATTGACGTCCACCAAGAGGCTTTGCATCTGCCGCTTCAACCAGAAGTGATGCTTA
>ID=gene:ENSRNA049467121;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1223065;repeat_name=RLG_Erika_3B_035_C19-1;repeat_type=LTRs::Scaffold10084:6506-6591(-)
TGTAACACCCCGGATGTAACTTTCCATATGTAACTCCAACTCTTGCCATTTTCGGCTATGTGTTATGGTATTCCCTTCGTGGTCG
>ID=gene:ENSRNA049467103;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=680461;repeat_name=LTR_AC200826.1_72;repeat_type=LTRs::Scaffold10084:61717-61753(-)
GGATTACTGTAGCATCATTACACCGGTGTGTTACAA
>ID=gene:ENSRNA049466720;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1604408;repeat_name=RLC_Barbara_3B_090_L01-2;repeat_type=LTRs::Scaffold56794:98299-98317(+)
GTCCAGCAGAATGGTCTC
>ID=gene:ENSRNA049466068;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=565488;repeat_name=RLG_Romani_3B_024_E11-1;repeat_type=LTRs::Scaffold26562:147830-147841(-)
ACTGCACCCGG
>ID=gene:ENSRNA049465970;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=1202272;repeat_name=LTR_AC200820.1_64;repeat_type=LTRs::Scaffold12183:58722-58773(+)
CCGTAGTTAAGCGTCTGGTCGGAGAACCCGGCCGGCAACGGGCTTCAGCTC
>ID=gene:ENSRNA049465530;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1202400;repeat_name=LTR_AC200820.1_64;repeat_type=LTRs::Scaffold34148:74853-74899(-)
TGGAGGGCAAGTCTGGTGCCAGCAGCCGCTGTAATTCCAGCTTCTT
>ID=gene:ENSRNA049464569;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2084447;repeat_name=trep3125;repeat_type=LTRs::Scaffold60557:64682-64774(-)
AAAACTAGCCAGTCCTTTGGGTATGAAACCCATTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGAAAGGGTTTC
>ID=gene:ENSRNA049463892;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=2067033;repeat_name=RLC_Inga_3B_030_O03-1;repeat_type=LTRs::Scaffold671:12734-12865(-)
GAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTGCTTAACCGTGCACAAATTCCCACACTCAACATGATATACGGTCTAGATGC
>ID=gene:ENSRNA049463798;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2109252;repeat_name=LTR_HVVMRX83KhA0218N24_v68_c1_680;repeat_type=LTRs::Scaffold19758:46753-46828(+)
GGATCCCATCAGAACTCCGAAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTT
>ID=gene:ENSRNA049463525;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2084451;repeat_name=trep3125;repeat_type=LTRs::Scaffold65083:59113-59204(-)
AAAACTAGCCAGTCTTTTGGGTATGAAACCCATTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGAAAGAGTTT
>ID=gene:ENSRNA049463264;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2084449;repeat_name=trep3125;repeat_type=LTRs::Scaffold103174:4839-4931(+)
AAAACTAGCCAGTCCTTTGGGTATGAAACCCATTTGGGTGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGAAAGGGTTTC
>ID=gene:ENSRNA049462805;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1520159;repeat_name=RLC_Angela_3B_016_K12-3;repeat_type=LTRs::Scaffold80493:12650-12941(-)
AAGGTCTTTCATTGAAAAATTCTTATTCAAGTATCCTTTTATGCTATCCTGAAATTCTATATCATTTCCGATCAACAATATGTCATCCACATATAATATCAGAAATGCTACAGAGCTCCCACTCACGTTCTTGTAAATACAGGCTTCTCCAAAGAATTGTATAAAACCACATGCTTTGATCACACTATCAAAGCGTATATTCCATCTCCGAGAGGCTTGCACCAGTCCATAAATGGATCGCTGGAGCTTGCACACTTTGTTAGCACCTTTTGGATCGAAAAAGCCTTCTAG
>ID=gene:ENSRNA049462744;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=63692;repeat_name=Angela1_AT_LTR;repeat_type=LTRs::Scaffold48713:31884-31921(+)
GAGTTGGCATAGATCGAGATTAGGATTTGTCACTCCG
>ID=gene:ENSRNA049462744;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1854760;repeat_name=trep4060;repeat_type=LTRs::Scaffold48713:31884-31921(+)
GAGTTGGCATAGATCGAGATTAGGATTTGTCACTCCG
>ID=gene:ENSRNA049462398;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2084452;repeat_name=trep3125;repeat_type=LTRs::Scaffold39588:29585-29677(-)
AAAAGTAGCCAGTCTTTTGGGTATGAAACCCATTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGAAAGGGTTTC
>ID=gene:ENSRNA049462306;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=705727;repeat_name=DTC_Boris_3B_039_D24-1;repeat_type=Type II Transposons::Scaffold53060:47729-47753(+)
CCACTCTGTCGCCGCCGCCGTCGC
>ID=gene:ENSRNA049461953;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1432129;repeat_name=RLG_Latidu_3B_049_D02-1;repeat_type=LTRs::Scaffold113603:43702-43785(-)
CATTTTTAGGATTTATTTAATTATTTTAAATCAACATTATCCTGAATAGTGTTTGCTGACGTCATCATAACGTCAACATGACA
>ID=gene:ENSRNA049461953;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=2057633;repeat_name=LTR_AC200843.1_92;repeat_type=LTRs::Scaffold113603:43704-43785(-)
CATTTTTAGGATTTATTTAATTATTTTAAATCAACATTATCCTGAATAGTGTTTGCTGACGTCATCATAACGTCAACATGA
>ID=gene:ENSRNA049458923;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2193319;repeat_name=RIX_Stasy_3B_001_C11-1;repeat_type=Type I Transposons/LINE::Scaffold14527:32964-32996(+)
AAAACTAGCCAGTCTTTTGGGTATGAAACCCA
>ID=gene:ENSRNA049458923;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2199028;repeat_name=LTR_AC197531.2_9792;repeat_type=LTRs::Scaffold14527:33020-33056(+)
GGGTGACCTCCTGGGAAGTCCTCGTGAAAGGGTTTC
>ID=gene:ENSRNA049456815;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=1748490;repeat_name=trep4238;repeat_type=LTRs::Scaffold15227:55680-55831(-)
ACCGACGCGATGGTGAAGATCATTTTGGAAAAGACTTTAAAATTAGTGGGATGTGTTTGGGAACAAAACATAATACCCCATATAAAACTTCCTTCAAAAAGGATTTTCGAAATCCCGTCCATAAAAAACATGAACTCGAGTCGTATTCGTT
>ID=gene:ENSRNA049456693;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=1081672;repeat_name=RLG_Sakura_3B_068_G05-1;repeat_type=LTRs::Scaffold11182:11820-11829(-)
GTTCGAAGA
>ID=gene:ENSRNA049456118;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=2210348;repeat_name=LTR_Al_scaffold_0003_560;repeat_type=LTRs::Scaffold26627:30902-30939(+)
GGCAACCTACTCGGATAACCATAGTAATTCTAGAGCT
>ID=gene:ENSRNA049454415;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=151946;repeat_name=THALOS_AT;repeat_type=Type II Transposons::Scaffold110675:11626-11670(-)
AATGTATATAGACATATATTAGAGTGTAGATTTACTCATTTTGC
>ID=gene:ENSRNA049454415;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=427451;repeat_name=RLG_Sabrina_3B_090_F24-1;repeat_type=LTRs::Scaffold110675:11626-11670(-)
AATGTATATAGACATATATTAGAGTGTAGATTTACTCATTTTGC
>ID=gene:ENSRNA049453961;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2084454;repeat_name=trep3125;repeat_type=LTRs::Scaffold92513:55145-55237(+)
AAAACTAGCCAGTCCCATAGGTATGAAACCCATTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGAAAGGGTTTC
>ID=gene:ENSRNA049453975;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2084454;repeat_name=trep3125;repeat_type=LTRs::Scaffold92513:55275-55367(+)
AAAACTAGCCAGTCTTTTGGGTATGAAACTCATTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGAGAAGTCCTCGTGAAAGGGTTTC
>ID=gene:ENSRNA049453682;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1108209;repeat_name=LTR_HVVMRXALLrA0217D06_ipk26_c5_3917;repeat_type=LTRs::Scaffold34530:12869-12966(+)
GGATGGCTATATTATTCAATTTAGTAAGATACGTCACAATTTTCAGTTTCATAACCATAAAAGGGACTACATTCAACGAAAGTGATTAGCTCAGGAT
>ID=gene:ENSRNA049452850;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=1719576;repeat_name=RLG_Laura_3B_098_L13-4;repeat_type=LTRs::Scaffold8979:11894-11931(+)
ATTACTTTTGATATAGAGATCATTGAAACTCACTATA
>ID=gene:ENSRNA049452797;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=726443;repeat_name=trep4187;repeat_type=Type II Transposons::Scaffold56112:20604-20727(+)
GGAAGTAGTGTCAGGTGGCAAGGGAGAAGCACCGGATCCCATCAGAACTCCGAAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCATTCC
>ID=gene:ENSRNA049452382;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=287669;repeat_name=DTC_Jorge_3B_040_D16-1;repeat_type=Type II Transposons::Scaffold86443:26542-26562(-)
GATGCTTCTATTACTTTTGG
>ID=gene:ENSRNA049452237;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=1814587;repeat_name=LTR_HVVMRX83khA0189F10_v71_c1_1092;repeat_type=LTRs::Scaffold47933:40143-40172(+)
AGAACCTATGGCTGAGGCATAGGGGATGG
>ID=gene:ENSRNA049452154;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=1134859;repeat_name=RLX_unnamedfam16_3B_059_I05-1;repeat_type=LTRs::Scaffold251367:11535-11541(-)
ACAACT
>ID=gene:ENSRNA049452154;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2084465;repeat_name=trep3125;repeat_type=LTRs::Scaffold251367:11449-11541(-)
ACAACTAGCCAGTCTTTTGGGTATGAAACCCTTTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGAAAAGGTTTC
>ID=gene:ENSRNA049451792;Name=5_8S_rRNA;biotype=rRNA;description=5.8S ribosomal RNA overlaps with ID=2246147;repeat_name=TXX_Gr_DX403825.1_7641;repeat_type=Unknown::Scaffold46624:26686-26840(+)
CTCTCCGCAACAGATATCTCGGCTCTCACATCGATGAAGAACGTAGCGAAATGCGATACCTGGTGTTAATTGCAGAATCCCGCCAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCCACTTGGGCGAGGGCACACCTGCGTGGACGTCA
>ID=gene:ENSRNA049451555;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=1496862;repeat_name=trep4321;repeat_type=LTRs::Scaffold57019:26070-26071(-)
G
>ID=gene:ENSRNA049451471;Name=5_8S_rRNA;biotype=rRNA;description=5.8S ribosomal RNA overlaps with ID=1920802;repeat_name=DTC_Jorge_3B_015_P16-2;repeat_type=Type II Transposons::Scaffold120533:10828-10888(+)
CACATTTTGATGGGATCCGAAATATTTTTATCCCGAAATTTCTAATCAGATTAAATACAA
>ID=gene:ENSRNA049451354;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=720420;repeat_name=DTC_Jorge_3B_034_E06-2;repeat_type=Type II Transposons::Scaffold41454:7199-7481(+)
ACAGGCATAGTCAACGGCGCGGCAGAGACATTCGTGTGCAAGGGCACCGGCACGGGCACGCGCAGGCGCCTGCGCTGGCAGGTAATTTATTAGATAAAAGGCTGACGCGGGCTCTGCTCGCTGATCCGATGATTCATGATAACTCGACGGATCGCACGGCCTTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAACGGGAGCGGGGACAGGCGCGGCGTCTTCCCG
>ID=gene:ENSRNA049451075;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=405860;repeat_name=DTC_unnamedfam55_3B_059_I05-1;repeat_type=Type II Transposons::Scaffold51534:15229-15313(+)
AGAACTCCGAAGTTAAGCGTGCTTGGGCTGGAGTAGTGTGAGGATGGGTGACCTTCCGGGAAGTTTGACCACTTAGTGCGATTT
>ID=gene:ENSRNA049450143;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=832295;repeat_name=DTC_Jorge_3B_035_F06-1;repeat_type=Type II Transposons::Scaffold65012:14194-14195(+)
A
>ID=gene:ENSRNA049450040;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2084460;repeat_name=trep3125;repeat_type=LTRs::Scaffold139763:14715-14800(+)
AGCCCGTCCCATAGGTATGTAACCCCTTTGAGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGAAAGGGTTT
>ID=gene:ENSRNA049449896;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=1653499;repeat_name=RLG_unnamedfam85_3B_058_I14-1;repeat_type=LTRs::Scaffold34742:44436-44441(-)
GCTTG
>ID=gene:ENSRNA049449528;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=2187006;repeat_name=LTR_AC200788.1_27;repeat_type=LTRs::Scaffold31837:6399-6524(+)
AACCACAATTTTTGATGAGGTCTCATTAATTACACTTTTCTTACATCTTCAATTGTAACATAGCATATAATCTTTACAAAAGATTCATTTAGTGAAAACATAACTCGTCTCACCATAAGGTGCGA
>ID=gene:ENSRNA049449528;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=2187007;repeat_name=LTR_AC200788.1_27;repeat_type=LTRs::Scaffold31837:6860-6900(+)
TACATAATTGGAGTTGACTTAATAACATATAAAATCACGT
>ID=gene:ENSRNA049449543;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=1470192;repeat_name=RLG_Nusif_3B_014_A09-2;repeat_type=LTRs::Scaffold5809:32611-32642(-)
CCTCATACACCAGCACTAAAGCACCGGATCC
>ID=gene:ENSRNA049449300;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=912935;repeat_name=LTR_AC207921.1_126;repeat_type=LTRs::Scaffold152045:734-792(+)
CAGCGGAGATGGACACCAAGCGAGGCAGATATCAGCCCGAGTCATCCAAGAGCAGCCG
>ID=gene:ENSRNA049449300;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2238363;repeat_name=LTR_HVVMRXALLhB0050A01_v47_c1_3174;repeat_type=LTRs::Scaffold152045:679-792(+)
GGATGCGATCATACCAGCACTAAAGCACCGGATCCCATCAGAACTCCGAAGTTATCAGCGGAGATGGACACCAAGCGAGGCAGATATCAGCCCGAGTCATCCAAGAGCAGCCG
>ID=gene:ENSRNA049448845;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=948308;repeat_name=LTR_AC207953.1_170;repeat_type=LTRs::Scaffold53840:20810-20847(+)
ATTACTTTTGATATAGAGATCATTGAAACTCACTATA
>ID=gene:ENSRNA049448091;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2084475;repeat_name=trep3125;repeat_type=LTRs::Scaffold87558:1875-1967(-)
AAAACTAGCCATTATTTTGGGTATGAAACCCATTTGGGCAAGAGTAGTACTAGGATGGGTGATCTCCCGGGAAGTCCTCGTGAAAGGGTTTC
>ID=gene:ENSRNA049448266;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=406563;repeat_name=LTR_HVVMRXALLhA0639B21_v3_c4_2889;repeat_type=LTRs::Scaffold238218:933-1053(-)
CAACAAGTGGCTGTTAAGTGAGGTGGTGCTGGATCCCATTAGAACTACGAAGTTAAGCGTGCTCGGCCTGGAGTAGTGTGAGGATGGGTGACCTTCCGGGAAGTTTGACCACTTAGTTGC
>ID=gene:ENSRNA049448266;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2181972;repeat_name=trep2221;repeat_type=Type II Transposons::Scaffold238218:933-1053(-)
CAACAAGTGGCTGTTAAGTGAGGTGGTGCTGGATCCCATTAGAACTACGAAGTTAAGCGTGCTCGGCCTGGAGTAGTGTGAGGATGGGTGACCTTCCGGGAAGTTTGACCACTTAGTTGC
>ID=gene:ENSRNA049479705;Name=5_8S_rRNA;biotype=rRNA;description=5.8S ribosomal RNA overlaps with ID=2210343;repeat_name=LTR_Al_scaffold_0003_560;repeat_type=LTRs::Scaffold2102:101102-101258(-)
GACTCTCGGCAACAGATATCTCGGCTCTCGCATCGATCAAGAACGTAGAAAAATGCGATACCTTGTGTGAATTGCAGAATCCCGCGAACCATCGAGTCTTGGAACGCAAGTTGCGCCCGAGGCCACTCGGCTGAGGGCACGCCTGCCTGGGCATCA
>ID=gene:ENSRNA049479696;Name=5_8S_rRNA;biotype=rRNA;description=5.8S ribosomal RNA overlaps with ID=2210344;repeat_name=LTR_Al_scaffold_0003_560;repeat_type=LTRs::Scaffold2102:138171-138327(-)
GACTCTCGGGAACGGATATCTTGTCTCTCGCATCGATGAAGAATGTAGCGAAATGCGATACCTGGTGTGAGTTGCAGAATCCCGCGAACCATCGAGTCTTTGAACGCAAGTTGCACCCGAGGCCACTCGGCCGAGGGCACGCATGCCTGGGCGTCA
>ID=gene:ENSRNA049479665;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=2210347;repeat_name=LTR_Al_scaffold_0003_560;repeat_type=LTRs::Scaffold2102:176064-176449(+)
TTGCTCGAGCTGCTCACGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACCGGGAATCGCCCCTTCGGGGGCTTTCCCCGAGCATGAAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCTCGCGGATGCTGACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGG
>ID=gene:ENSRNA049479552;Name=5_8S_rRNA;biotype=rRNA;description=5.8S ribosomal RNA overlaps with ID=2247859;repeat_name=LTR_Al_scaffold_0003_561;repeat_type=LTRs::Scaffold23850:19851-20007(+)
AACTCTCGGCAACTGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCAATACCTGGTGTGAATTGCAGAATCCCGCAAACCATCAAGTCTTTGAATGCAAGTTGTGCCCGAGGCCACTCGGCCGAGGGCACGCCTGCATGGGCATCA
>ID=gene:ENSRNA049479157;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2115893;repeat_name=LTR_HVVMRXALLmA0294L17_ipk25_c2_3578;repeat_type=LTRs::Scaffold79880:2994-3059(+)
TAGAACTCCGAAGCTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGT
>ID=gene:ENSRNA049479137;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2115902;repeat_name=LTR_HVVMRXALLmA0294L17_ipk25_c2_3578;repeat_type=LTRs::Scaffold79880:9092-9165(+)
GATCCCATCAGAACTCTGAAGTTAAGCGTGCTTGGATGAGAGTAGTACTAGGATGGGTGACCTCTTGGGAAGT
>ID=gene:ENSRNA049479118;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2115895;repeat_name=LTR_HVVMRXALLmA0294L17_ipk25_c2_3578;repeat_type=LTRs::Scaffold79880:4740-4814(+)
GGATCTCATCAGAACTCCGAAGTTAAGCGTGCTTGGTCGAGAGTAGTACTAGGATGGATGACCTCCTGGGAAGT
>ID=gene:ENSRNA049479112;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2115901;repeat_name=LTR_HVVMRXALLmA0294L17_ipk25_c2_3578;repeat_type=LTRs::Scaffold79880:8643-8717(+)
GGATCCCATCAGAACTCCAAAATTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCACCTGGGAAGT
>ID=gene:ENSRNA049479102;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2115900;repeat_name=LTR_HVVMRXALLmA0294L17_ipk25_c2_3578;repeat_type=LTRs::Scaffold79880:8195-8269(+)
GGATCCCATCAGAACTCCGAAGTTAAGTGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCTTGGGATGT
>ID=gene:ENSRNA049479022;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2084477;repeat_name=trep3125;repeat_type=LTRs::C141088066:864-939(+)
TATGAAACCCATTTGAGCGAGAGTAGTACTAGGATGGGTGACCTTCTGGGAAGTCCTCGTGAAAGGGTTTCATAT
>ID=gene:ENSRNA049478121;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2084462;repeat_name=trep3125;repeat_type=LTRs::Scaffold77162:11487-11579(-)
AAAACTAGCCAGTCCCATGGGTATGAAACCCATTTGAGTGAGAGTAGTACTAGGATGGGTGACCTCTTGGGAAGTCCTCGTGAAAGGGTTTC
>ID=gene:ENSRNA049478102;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1889361;repeat_name=LTR_AC207910.1_114;repeat_type=LTRs::Scaffold123235:21691-21740(-)
ACAGCTCAGCAGTCGGCCCGAATCTCGGGGATTAAACTGAGAAGCTGCG
>ID=gene:ENSRNA049476966;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=1769428;repeat_name=DTC_Jorge_3B_035_C19-1;repeat_type=Type II Transposons::Scaffold213467:312-382(+)
TTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAA
>ID=gene:ENSRNA049476933;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=2148339;repeat_name=RLG_Latidu_3B_053_M17-1;repeat_type=LTRs::Scaffold20059:5761-6102(-)
GGGAAATTGTGACGCCCGGATAATTAGGCTACAGTAAACCTACGCTAATGATGCCACGTCACCTCTGTTACTGTTGCTAACATCGCGTTAGAACAAAACGTTTCAAAATCAAATTTGAATTTTAGGCAAACATTAAAAGTTTTCGAACATAAAGACTAAAATGTTCTAGAGGTGACAAATATCGCATAGTTAATTATGGTGGAGAATCCACATATTTATAAAATATTTAAGTGCATTAAAATGATTTAACCTGTAGTGAAAACAATTAAATAAATGCCTAATTTTTATAAGATATTAAAACTATTTTATTATGGTCTAGGAATTAATCTGACAGTAGTTTA
>ID=gene:ENSRNA049447817;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=2151337;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::Scaffold117953:627-668(+)
CAAGAGGGAAGTTTTGTAAAAGCAACAGGAAGAATTGCTCA
>ID=gene:ENSRNA049447270;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2084469;repeat_name=trep3125;repeat_type=LTRs::Scaffold161325:113-205(-)
AAAACTAGCCAGTCTTTTGGGTATGAAACCCATTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGAAAGGGTTTC
>ID=gene:ENSRNA049475584;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1305475;repeat_name=LTR_AC200828.1_75;repeat_type=LTRs::Scaffold158432:11302-11308(+)
GGCCAC
>ID=gene:ENSRNA049475463;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2084473;repeat_name=trep3125;repeat_type=LTRs::C141054532:1-74(+)
CCAGTCTTTTGGGTATGAAACCCATTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGAAGTCCTCGTG
>ID=gene:ENSRNA049474256;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2084474;repeat_name=trep3125;repeat_type=LTRs::Scaffold258383:666-758(+)
AAAACTAGCCAGTCTTTTGGGTATGAAACCCATTAGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGAAAGGGTTTC
>ID=gene:ENSRNA049474070;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=91889;repeat_name=Angela1_AT_LTR;repeat_type=LTRs::Scaffold49409:15326-15446(-)
GGATGCGATCATACGAGCACTAAAGCACCGGATCCCATCAGAACTCCGAAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCCCTTTAGGGTTCCCC
>ID=gene:ENSRNA049474070;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=968441;repeat_name=LTR_HVVMRX83KhA0060C11_v43_c1_189;repeat_type=LTRs::Scaffold49409:15343-15417(-)
GGATCCCATCAGAACTCCGAAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGT
>ID=gene:ENSRNA049474070;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=1483039;repeat_name=LTR_HVVMRX83KhA0181D24_ipk16_c3_593;repeat_type=LTRs::Scaffold49409:15326-15331(-)
TCCCC
>ID=gene:ENSRNA049472545;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2084435;repeat_name=trep3125;repeat_type=LTRs::Scaffold9234:134571-134663(+)
AAAACTAGCCAGTCCTTTGGGTATGAAACCCATTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTAAAAGGGTTTC
>ID=gene:ENSRNA049472521;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=1512301;repeat_name=RIX_Stasy_3B_078_H18-1;repeat_type=Type I Transposons/LINE::Scaffold19648:178912-178944(-)
AAAGCTAGCCAGTCCTTTGGGTATGAAACCCA
>ID=gene:ENSRNA049472521;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=1823235;repeat_name=trep3323;repeat_type=Type I Transposons/LINE::Scaffold19648:178851-178858(-)
GGTTTCA
>ID=gene:ENSRNA049471505;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2218284;repeat_name=LTR_AC191802.2_8450;repeat_type=LTRs::Scaffold12727:40983-41019(+)
GGGTGACCTCTTGGGAAGTCCTCGTGAAAGGGTTTC
>ID=gene:ENSRNA049470697;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1712240;repeat_name=RLG_Laura_3B_034_D19-1;repeat_type=LTRs::Scaffold13958:7349-7396(-)
GTAACACCTCATATCACTTTGCGGCCGCACGCGCGCTACACTGATGT
>ID=gene:ENSRNA049435430;Name=tRNA-Ala;biotype=tRNA;description=tRNA-Ala for anticodon UGC overlaps with ID=2240274;repeat_name=LTR_Gm_18_6105;repeat_type=LTRs::Scaffold1023:44865-44938(-)
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGCACGGGGTTCGATCCCCCGCATCTCCA
>ID=gene:ENSRNA049435144;Name=tRNA-Ile;biotype=tRNA;description=tRNA-Ile for anticodon AAU overlaps with ID=2242314;repeat_name=LTR_Al_scaffold_0002_362;repeat_type=LTRs::Scaffold59005:58823-58897(+)
GGCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCACAGGTTCGAGACCTGTATGGGCCA
>ID=gene:ENSRNA049435155;Name=tRNA-Ile;biotype=tRNA;description=tRNA-Ile for anticodon AAU overlaps with ID=2242313;repeat_name=LTR_Al_scaffold_0002_362;repeat_type=LTRs::Scaffold59005:51141-51215(+)
GGCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCACAGGTTCGAGACCTGTATGGGCCA
>ID=gene:ENSRNA049437667;Name=tRNA-Tyr;biotype=tRNA;description=tRNA-Tyr for anticodon GUA overlaps with ID=2231891;repeat_name=LTR_Al_scaffold_0001_223;repeat_type=LTRs::Scaffold36869:103159-103246(-)
CCGACTTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGTGTATGCAGATTTGATCCTTAGGTCGCTGGTTCGAATCCGGCAAGTCGGA
>ID=gene:ENSRNA049436394;Name=tRNA-Ser;biotype=tRNA;description=tRNA-Ser for anticodon CGA overlaps with ID=2231890;repeat_name=LTR_Al_scaffold_0001_223;repeat_type=LTRs::Scaffold16824:78369-78451(-)
GTCGATATGTCCGAGTGGTTAAGGAGACAGACTCGAAATCTGTTGGGCTTTGCCTGCGCAGGTTCGAATCCTGCTGTCGACG
>ID=gene:ENSRNA049436440;Name=tRNA-Ser;biotype=tRNA;description=tRNA-Ser for anticodon UGA overlaps with ID=2231886;repeat_name=LTR_Al_scaffold_0001_223;repeat_type=LTRs::Scaffold21507:106402-106484(-)
GTCGATATGTCCGAGTGGTTAAGGAGACAGACTTGAAATCTGTTGGGCTACGCCCGCGCAGGTTCGATCCCTGCTGTCGACG
>ID=gene:ENSRNA049436456;Name=tRNA-Ser;biotype=tRNA;description=tRNA-Ser for anticodon UGA overlaps with ID=2231888;repeat_name=LTR_Al_scaffold_0001_223;repeat_type=LTRs::Scaffold21507:121525-121607(-)
GTCGATATGTCCGAGTGGTTAAGGAGACAGACTTGAAATCTGTTGGGCTACGCCCGCGCAGGTTCGATCCCTGCTGTCGACG
>ID=gene:ENSRNA049434086;Name=tRNA-Trp;biotype=tRNA;description=tRNA-Trp for anticodon CCA overlaps with ID=2237511;repeat_name=LTR_AC191345.3_7798;repeat_type=LTRs::Pt:63274-63348(-)
GCGCTCTTAGTTCAGTTCGGTAGAACGCGGGTCTCCAAAACCCGATGTCGTAGGTTCAAATCCTACAGAGCGTG
>ID=gene:ENSRNA049436451;Name=tRNA-Ser;biotype=tRNA;description=tRNA-Ser for anticodon UGA overlaps with ID=2231887;repeat_name=LTR_Al_scaffold_0001_223;repeat_type=LTRs::Scaffold21507:121379-121461(-)
GTCGATATGTCCGAGTGGTTAAGGAGACAGACTTGAAATCTGTTGGGCTACGCCCGCGCAGGTTCGATCCCTGCTGTCGACG
>ID=gene:ENSRNA049436470;Name=tRNA-Ser;biotype=tRNA;description=tRNA-Ser for anticodon UGA overlaps with ID=2231889;repeat_name=LTR_Al_scaffold_0001_223;repeat_type=LTRs::Scaffold21507:144327-144409(+)
GTCGATATGTCCGAGTGGTTAAGGAGACAGACTTGAAATCTGTTGGGCTACGCCCGCGCAGGTTCGATCCCTGCTGTCGACG
>ID=gene:ENSRNA049439826;Name=tRNA-Asn;biotype=tRNA;description=tRNA-Asn for anticodon GUU overlaps with ID=2206169;repeat_name=LTR_Mt_chr_05_619;repeat_type=LTRs::Scaffold18459:107433-107507(-)
GCTGGAATAGCTCAGTTGGCTAGAGCGTGTGGCTGTTAACCGCAAGGTCGGAGGTTCGAGCCCTCCTTCTAGCG
>ID=gene:ENSRNA049433799;Name=tRNA-Lys;biotype=tRNA;description=tRNA-Lys for anticodon UUU overlaps with ID=2240831;repeat_name=LTR_Gm_08_2830;repeat_type=LTRs::Scaffold102497:15234-15307(+)
GCCGTCCTAGCTCAGCTGGTAGAGCGCACGGCTTTTAACCGTGTGGTCGTGGGTTCGAATCCCACGGACGGCG
>ID=gene:ENSRNA049433929;Name=tRNA-Asn;biotype=tRNA;description=tRNA-Asn for anticodon GUU overlaps with ID=2206170;repeat_name=LTR_Mt_chr_05_619;repeat_type=LTRs::Scaffold167293:23944-24018(-)
GCTGGAATAGCTCAGTTGGCTAGAGCGTGTGGCTGTTAACCACAAGGTCGGAGGTTCGAGCCCTCCTTCTAGCG
>ID=gene:ENSRNA049433769;Name=tRNA-Lys;biotype=tRNA;description=tRNA-Lys for anticodon CUU overlaps with ID=2247420;repeat_name=LTR_AC183412.5_672;repeat_type=LTRs::Scaffold207913:9239-9312(-)
GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCG
>ID=gene:ENSRNA049433865;Name=tRNA-Phe;biotype=tRNA;description=tRNA-Phe for anticodon GAA overlaps with ID=2247430;repeat_name=LTR_Mt_chr_05_582;repeat_type=LTRs::Scaffold268668:14697-14770(-)
GCGGGGATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCA
>ID=gene:ENSRNA049433864;Name=tRNA-Lys;biotype=tRNA;description=tRNA-Lys for anticodon CUU overlaps with ID=2247419;repeat_name=LTR_AC183412.5_672;repeat_type=LTRs::Scaffold268668:2719-2792(-)
GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCG
>ID=gene:ENSRNA049433761;Name=tRNA-Lys;biotype=tRNA;description=tRNA-Lys for anticodon CUU overlaps with ID=2247422;repeat_name=LTR_AC183412.5_672;repeat_type=LTRs::Scaffold102941:4306-4379(+)
GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCTTGGGTTCGAGCCCCAAGGTGGGCG
>ID=gene:ENSRNA049433818;Name=tRNA-Phe;biotype=tRNA;description=tRNA-Phe for anticodon GAA overlaps with ID=2247432;repeat_name=LTR_Mt_chr_05_582;repeat_type=LTRs::Scaffold222648:4244-4317(+)
GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCA
>ID=gene:ENSRNA049433826;Name=tRNA-Tyr;biotype=tRNA;description=tRNA-Tyr for anticodon GUA overlaps with ID=2231896;repeat_name=LTR_Al_scaffold_0001_223;repeat_type=LTRs::C141555027:1465-1552(+)
CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGTGGATGCAGATTAAATCCTTAGGTCACTGGTTCGAATCCGGTAGGTCGGA
>ID=gene:ENSRNA049433780;Name=tRNA-Ile;biotype=tRNA;description=tRNA-Ile for anticodon UAU overlaps with ID=2242315;repeat_name=LTR_Al_scaffold_0002_362;repeat_type=LTRs::C141036012:408-482(+)
GGTCTTGTAGCTCAATTGGTTAGAGCGTCGGTCTTATATGCCGCAGGTTGAGGGTTCAAGCCCCTCCGAGACCA
>ID=gene:ENSRNA049476603;Name=mir-2973;biotype=pre_miRNA;description=mir-2973 microRNA precursor overlaps with ID=2089962;repeat_name=DTC_Caspar_3B_091_N08-1;repeat_type=Type II Transposons::Scaffold85951:5681-5730(+)
GACTGCACGGAGCAAACTGCTGCTTCGTAGCAGTTTGCTCCGTGCAGTC
>ID=gene:ENSRNA049478897;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=913568;repeat_name=LTR_AC207921.1_126;repeat_type=LTRs::Scaffold193219:580-683(-)
GCATCGGCCTCCCCTACCTGGCGCGCCAATTGTTGGATCACGGGTTCCGGCAAAACCCTCACGGTTCGAACACTGGGGTGCACACAAAGATCTCCCCCTGCTG
>ID=gene:ENSRNA049478897;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=917709;repeat_name=trep2318;repeat_type=LTRs::Scaffold193219:686-797(-)
CCTTGAGATCTTAGCGAAGCTAGGACGTGGATCGGTAGGGGGAGATCTTCGTGAAGACCCGAGTGTTCGAACCTTGAGGGTTTTGCCGGAACCCGTGATCCGACATTTGGC
>ID=gene:ENSRNA049478897;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=2197654;repeat_name=LTR_HVVMRX83KhA0043C24_v72_c1_119;repeat_type=LTRs::Scaffold193219:680-733(-)
GTTCGAACCTTGAGGGTTTTGCCGGAACCCGTGATCCGACATTTGGCCCTGCA
>ID=gene:ENSRNA049478094;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=2235167;repeat_name=LTR_AC198290.2_10424;repeat_type=LTRs::Scaffold9090:13582-13873(-)
GCCGAGCTCAGTCACGAGAGCTTGTGACCCATGTGGGGGCATCAAGGTGGTGTGGATGATTGGTGCGTATTCTCGGCCTGGGCCTGTGGAGTGACTTTGCCGGCTTGCCCGTTCCAAGTTGGTAGTGGGCTGGGTGGCTGGGGCGAAAGCCTCGGCCTCTCAGGCCCTGAAGCGGCAGGCACCACGTTAGGCTGGTTTCACAGAGCAGCGTTTACTGCCGGAAGGATAACAGGCCGCTGCACCATGGGTCCACTCTGGCCTAGGACCCCTCCATAACAGGCCCCCATCTTT
>ID=gene:ENSRNA049473304;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=1505806;repeat_name=DTC_Clifford_3B_005_B23-1;repeat_type=Type II Transposons::Scaffold270101:602-611(+)
GCCGAGCTC
>ID=gene:ENSRNA049473304;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=2235171;repeat_name=LTR_AC198290.2_10424;repeat_type=LTRs::Scaffold270101:602-853(+)
GCCGAGCTCAGTTACGAGAGCTTGTAACCTGAGTGGGGGCATTAAAGTGATGTGGACGCTGTTGTAGCGCTGCGGGCCTGGTCTGGGTGTGCTACTGCTGGCCCGCCCGTTCCAAGTTGCGTAGTGGACCGCCTGGGGCCTATGCGAAAGCTGGGCCTCACGACCCATAATGTGGCAGGCACAGCGTGAGGCTGGCTTCACAGAGCAGCGACAACTGCCCGCTTCCAACGGTGGAAGGATAACGGGCCGCT
>ID=gene:ENSRNA049473304;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=2250894;repeat_name=ARSiTERT00100011;repeat_type=LTRs::Scaffold270101:745-906(+)
GCGAAAGCTGGGCCTCACGACCCATAATGTGGCAGGCACAGCGTGAGGCTGGCTTCACAGAGCAGCGACAACTGCCCGCTTCCAACGGTGGAAGGATAACGGGCCGCTGCACTCCTTGGCTGCTTGGGCCTCGCAGCCTACTCCAACGAACCATCACTTTT
>ID=gene:ENSRNA049471955;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=1755693;repeat_name=trep1802;repeat_type=Type II Transposons::Scaffold9744:2180-2189(-)
GCCGAGCTC
>ID=gene:ENSRNA049471955;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=2235160;repeat_name=LTR_AC198290.2_10424;repeat_type=LTRs::Scaffold9744:1885-2189(-)
GCCGAGCTCAGTTACCAGAGCTTGTAACCCGAGTGGGGGCATTAAGGTGATGTGGACGCTGTTGTAGCGCTGCGGGCCTAGTCTGGGAGTGCTACTGCTGGCCCGCCCGTTCCAAGTTGCGTAGTGGGCCGCTTGGGGCCTATGCAAAAGCGGGGCCTCATGGTCCATATTGTGGCAGGCACAGCGTGAGGCTGGCTTCACAGAGCAGCGACAACTGCCTGCTTCCAACGGTGGAAGGATAACGAGCCGCTCCACTCCTTGGCCACTTGGGCCTCGCAGCCTACTCCAACGGACCATCACTTTT
>ID=gene:ENSRNA049471949;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=1755695;repeat_name=trep1802;repeat_type=Type II Transposons::Scaffold9744:12265-12274(-)
GCCGAGCTC
>ID=gene:ENSRNA049471949;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=2235164;repeat_name=LTR_AC198290.2_10424;repeat_type=LTRs::Scaffold9744:11849-11986(-)
TAATGTGGCAGGCACAGCGTGAGGCTGGCTTCACAGAGCAGCGACAACTGCCCGCTTCCAACGGTGGAAGGATAACGGGCCGCTGCACTCCTTGGCCGCTTGGGCCTCGCAGCCTATTCCAGCGAACCATCATTTTT
>ID=gene:ENSRNA049471949;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=2235165;repeat_name=LTR_AC198290.2_10424;repeat_type=LTRs::Scaffold9744:12063-12274(-)
GCCGAGCTCAGTTGCGAGAGCTTGTAACCCGAGTGGGGGCATTAAGGTGATGTGGATGCTGTTGTAGAGTTGCGGGCCTGGTTTGGGTGTGCTACTGCTGGCCCGCCCGTTCCAAGTTGAGTAGTGGACCGCTTGGGGCCTATGCGAAAGCTGGGCCTCACGATCCATAATGTGGCAGGCACAGCGGGGGGGTGGCTTCCCCGAGCAGCGA
>ID=gene:ENSRNA049471941;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=1755694;repeat_name=trep1802;repeat_type=Type II Transposons::Scaffold9744:5542-5551(-)
GCCGAGCTC
>ID=gene:ENSRNA049471941;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=2235162;repeat_name=LTR_AC198290.2_10424;repeat_type=LTRs::Scaffold9744:5300-5551(-)
GCCGAGCTCAGTTACGAGAGTTTGTAACCCGAGTGGGGGCATTAAGGTGATGTGGACGCTGTTGTAGCGCTGCGGGCCTGGTCTAGGTGTGCTACTGCTGGCCCGCCCATTCCAAGTTGCGTAGTGGATCGCCTGGGGCCTATGCGAAAGCTGGGCCTCACGGTCCATAATGTGGCAGGCACAGCGTGAGGCTGGCTTCACAGAGCAGCGACAACTGCCTGCTTCCAACGGTGGAAGGATAACGAGCCGCT
>ID=gene:ENSRNA049469728;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=978953;repeat_name=RLG_Wilma_3B_023_N15-1;repeat_type=LTRs::Scaffold1191:90577-90696(-)
TGAAGATGTTGATGGAGATTGCCCTCCCCAAGATGGGAGAGTTGTTGGTGATGATGATGACGATGATTTCCCCCTCCGGGAGGGAAGTTCCCCTAGCAGAATCGCTCCGCTTGAGGGCA
>ID=gene:ENSRNA049469728;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=981228;repeat_name=RLG_Wilma_3B_016_K12-1;repeat_type=LTRs::Scaffold1191:90489-90609(-)
TTCCCCTAGCAGAATCGCTCCGCTTGAGGGCAGGAGTCCCTCCCGGAGGGGGAAATCATAGTCATCATCATCACCAACAACTCTCCCATCTTGGGGAGGGCAATCTCCATCAACATCTTC
>ID=gene:ENSRNA049457670;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=355154;repeat_name=DTC_Clifford_3B_080_N22-1;repeat_type=Type II Transposons::Scaffold23008:37180-37189(+)
GCCGAGCTC
>ID=gene:ENSRNA049450826;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=2235168;repeat_name=LTR_AC198290.2_10424;repeat_type=LTRs::Scaffold98975:5276-5580(-)
GCCGAGCTCAGTCACGAGAGCTTGTGACCCATGTGGGGGCATCAAGGTGGTGTGGATGTTTGGTGCGGATTCTCGGCCTGGGCCTGTGGTGTGACTTTGCCGGCTTGCCCGTTCCAAGTTGGTAGTGGGCTGGGTGGCTTGGGCGAAAGCCTCGGCCTCTCAGGCCCTGAAGCGGCAGGCACCACGTTAGGCTGGTTTCACAGAGCAGCGTTTACTGCCCGCTTCCAACGGTGGAAGGATAACTGGCCGCTGCACCATGGGCCCACTCTGGCCTAGGGTCCCTACATGACAGACCACCATTTTT
>ID=gene:ENSRNA049450526;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=176627;repeat_name=EnSpm-4_HV;repeat_type=Type II Transposons::Scaffold27994:4373-4382(+)
GCCGAGCTC
>ID=gene:ENSRNA049448647;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=1086092;repeat_name=trep28;repeat_type=Type II Transposons::C141470882:1508-1517(+)
GCCGAGCTT
>ID=gene:ENSRNA049448647;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=2235170;repeat_name=LTR_AC198290.2_10424;repeat_type=LTRs::C141470882:1508-1748(+)
GCCGAGCTTAGTTGCGAGAGCTTGTAACCCGAGTGGGGGCATTAAGGTGATGTGGACGTTGTTGTAGCGCTGCGGGCCTGGCCTGGGTGTGCTACTGCTAGCCCGCCCATTCCAAGTTGCGTAGTGGACCGGCTGGGGGGCCTATGCGAAAGCTGGGCCTCATGGTCCATAATGTGGGAAAGCGTGAGGCTGGCTTCACAGAGCAGCGACAACTGCCCGCTTCCAACGATGGAAGGATAA
>ID=gene:ENSRNA049479287;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=1300104;repeat_name=RLG_WHAM_3B_053_M11-2;repeat_type=LTRs::Scaffold23844:1787-1905(+)
GCCAAGAGTCACCCGAGGGGGGCACCTGGGTGGGGACAACCCACCAGGGCGCGCCCGGATCCTAAGAATGCTAACCACAACCCACCAGGGCGCGCCTAGGTGGGTTGTCCCCACCTAG
>ID=gene:ENSRNA049471961;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=1503974;repeat_name=DTC_Clifford_3B_005_B23-1;repeat_type=Type II Transposons::Scaffold9744:9736-9745(-)
GCCGAGCTC
>ID=gene:ENSRNA049471961;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=2235163;repeat_name=LTR_AC198290.2_10424;repeat_type=LTRs::Scaffold9744:9441-9745(-)
GCCGAGCTCAGTTACGAGAGCTTGTAACCCGAGTGGGGGCATTAAAGTGATGTGAACGCTGTTGTAGCGCTGCGGGCCTGGTCTGGGTGTGCTACTGCTGGCCCGCCCGTTCCAAGTTGCGTAGTGGACCGCCTGGGGCTTATGCGAAAGCTGGGTCTCACGGTCCATAATGTGGCAGGCACAGCGTGAGGCTGGCTTCACAGAGCAGCGACAACTGCCCGCTTCCAACGGTGGAAGGATAATGGGCCGCTGCACTCCTAGGCCAATTGGGCCTCGCAGCCTACTCCAACGGACCATCACTTTT
>ID=gene:ENSRNA049462998;Name=Plant_U3;biotype=snoRNA;description=Plant small nucleolar RNA U3 overlaps with ID=758430;repeat_name=LTR_AC207944.1_149;repeat_type=LTRs::Scaffold35921:35158-35275(-)
GGATTCATTCTCAAGGAAGCAAAAATTCAAGGCTAATGATTTCTTCGGCGAGCACGTATTCTTCACTGATTACAACCCCTATGACTCTGCTCGCATTAGGAGAGGCGTTTCTGGACT
>ID=gene:ENSRNA049462998;Name=Plant_U3;biotype=snoRNA;description=Plant small nucleolar RNA U3 overlaps with ID=2240909;repeat_name=LTR_HVVMRXALLhA0731O24_v20_c3_3026;repeat_type=LTRs::Scaffold35921:35158-35270(-)
CATTCTCAAGGAAGCAAAAATTCAAGGCTAATGATTTCTTCGGCGAGCACGTATTCTTCACTGATTACAACCCCTATGACTCTGCTCGCATTAGGAGAGGCGTTTCTGGACT
>ID=gene:ENSRNA049462454;Name=Plant_U3;biotype=snoRNA;description=Plant small nucleolar RNA U3 overlaps with ID=513504;repeat_name=LTR_AC200833.1_85;repeat_type=LTRs::Scaffold12189:58826-58845(+)
ACCGGCTGGGTTGAACAGG
>ID=gene:ENSRNA049462454;Name=Plant_U3;biotype=snoRNA;description=Plant small nucleolar RNA U3 overlaps with ID=513505;repeat_name=LTR_AC200833.1_85;repeat_type=LTRs::Scaffold12189:58923-58939(+)
CCTCTGGGACCAGACA
>ID=gene:ENSRNA049462204;Name=Plant_U3;biotype=snoRNA;description=Plant small nucleolar RNA U3 overlaps with ID=383268;repeat_name=LTR_AC200776.1_14;repeat_type=LTRs::Scaffold26923:13367-13396(-)
AAGTCCTAGCTTGAGGACATCTGCCGTGA
>ID=gene:ENSRNA049472605;Name=Plant_U3;biotype=snoRNA;description=Plant small nucleolar RNA U3 overlaps with ID=1278238;repeat_name=RLG_Sumaya_3B_082_K20-1;repeat_type=LTRs::Scaffold16010:199802-199813(+)
ACGACCTTACT
>ID=gene:ENSRNA049472605;Name=Plant_U3;biotype=snoRNA;description=Plant small nucleolar RNA U3 overlaps with ID=1278239;repeat_name=RLG_Sumaya_3B_082_K20-1;repeat_type=LTRs::Scaffold16010:199846-199894(+)
CATATGTTCAAAACATCCTTATTGAAGTATCCCAAAATAAGTATGGAT
>ID=gene:ENSRNA049479537;Name=IsrR;biotype=antisense_RNA;description=Antisense RNA which regulates isiA expression overlaps with ID=411296;repeat_name=LTR_AC200807.1_50;repeat_type=LTRs::Scaffold16026:48815-48828(+)
TGTTAGTGTTCTA
>ID=gene:ENSRNA049474406;Name=IsrR;biotype=antisense_RNA;description=Antisense RNA which regulates isiA expression overlaps with ID=2238310;repeat_name=LTR_Gr_chr_04_953;repeat_type=LTRs::Scaffold53226:23517-23704(-)
AATAACCAAATATAACACTGGGGCTAAGGGTCAAATTGGTAATTTTTCTTACATCTCCCCCCCCAGGGGCCCAGGTATCATATACACCGCCAAAATAAAGAGCCTTGAGTACTAGAAGAAAAGCACCTAGACCTAACAAAATTAAGTGAATACCCAAAATTGTAGTCATTTTATTTCTATCTTTCCA
>ID=gene:ENSRNA049468098;Name=IsrR;biotype=antisense_RNA;description=Antisense RNA which regulates isiA expression overlaps with ID=2238304;repeat_name=LTR_Gr_chr_04_953;repeat_type=LTRs::Pt:10168-10355(-)
AATAACCAAATATAACACTGGGGCTAAGGGTCAAATTGGTAATTTTTCTTACATCTCCCCCCCCAGGGGCCCAGGTATCATATACACCGCCAAAATAAAGAGCCTTGAGTACTAGAAGAAAAGCACCTAGACCTAACAAAATTAAGTGAATACCCAAAATTGTAGTCATTTTATTTCTATCTTTCCA
>ID=gene:ENSRNA049451697;Name=IsrR;biotype=antisense_RNA;description=Antisense RNA which regulates isiA expression overlaps with ID=2238308;repeat_name=LTR_Gr_chr_04_953;repeat_type=LTRs::Scaffold21980:18112-18299(+)
AATAACCAAATATAACACTGGGGCTAAGGGTCAAATTGGTAATTTTTCTTACATCTCCCCCCCCAGGGGCCCAGGTATCATATACACCGCCAAAATAAAGAGCCTTGAGTACTAGAAGAAAAGCACCTAGACCTAACAAAATTAAGTGAATACCCAAAATTGTAGTCATTTTATTTCTATCTTTCCA
>ID=gene:ENSRNA049447907;Name=IsrR;biotype=antisense_RNA;description=Antisense RNA which regulates isiA expression overlaps with ID=2246026;repeat_name=LTR_Gm_09_3061;repeat_type=LTRs::Scaffold162941:1439-1625(-)
AATAACCAAATATAACACTGGGGCTAAGGGTAAAATTGGTAATTTTTCTTACATCTCCCCCCCAGGGGCCCATGTATCATATACACCGCCAAAATAAAGAGCCTTGAGTACTAGAAGAAAAGCACCTAGACCTAACAAAATTAAGTGAATACCCAAAATTGTAGTCATTTTATTTCTATCTTTCCA
>ID=gene:ENSRNA049479583;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2151345;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::Scaffold168409:529-613(+)
GAGAGCCAAATGAATCGAAAGATTCATGTTTGGTTTGGGAAGAGATCATAAAAGTTGTAAACTTACAAAATAATCTACTTTCAT
>ID=gene:ENSRNA049479471;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2151297;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::Scaffold137090:742-806(-)
CTGAGCCGTATGAGGTAGGAAACTTTCAAGTACGGTTCTAAGGGAAGGAACTTCCTATTCCGAC
>ID=gene:ENSRNA049477549;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131865;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold128010:265-300(-)
GGAGCCGTATGAGGTGAGAGTCTCACGTACGGTTC
>ID=gene:ENSRNA049475814;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131844;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold172027:196-275(+)
AGGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGCATGAGAGAAAGAAGCGAGGAATCCTCTTTTCGACTCTGAC
>ID=gene:ENSRNA049474525;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131770;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold14474:934-1008(+)
GGAAGTTGTATTCGATGAAAGTTGTATGTACGGCTTGGAGGGAGATCTTTCCTATCTTTCGAGATCCACCCTAC
>ID=gene:ENSRNA049474516;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131770;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold14474:3270-3349(+)
AGGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGCATGAGAGAAAGAAGCGAGGAATCCTCTTTTCGACTCTGAC
>ID=gene:ENSRNA049473699;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2237283;repeat_name=RXX_Gk_DX403548.1_7560;repeat_type=Unknown::Scaffold45390:2916-2994(+)
AGGAGCCGTATGAAGCTAAGGTTTCATGTACGGTTTTGCAATAGCGGTGGGAGCTGTGATGTTATTATCGACTATGAT
>ID=gene:ENSRNA049472840;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=812541;repeat_name=DTC_Jorge_3B_115_C24-1;repeat_type=Type II Transposons::Scaffold2536:185323-185324(+)
G
>ID=gene:ENSRNA049472571;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2151134;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::Scaffold11852:206200-206284(+)
GAGAGCCAAATGAATCGAAAGATTCATGTTTGGTTTGGGAAGAGATCATAAAAGTTGTAAACTTACAAAATAATCTACTTTCAT
>ID=gene:ENSRNA049470867;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131716;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold20378:153733-153807(+)
GAAAGCCGTATTCGATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCCTATCTTTCGAGATCCACCCTAC
>ID=gene:ENSRNA049470673;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131704;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold10301:113614-113693(+)
AGGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGCATGAGAGAAAGAAGCGAGGAATCCTCTTTTCGACTCTGAC
>ID=gene:ENSRNA049469424;Name=Intron_gpI;biotype=sense_intronic;description=Group I catalytic intron overlaps with ID=2237285;repeat_name=LTR_AC188734.2_15331;repeat_type=LTRs::Scaffold6767:16553-16759(-)
CTACGGACTTGATTGTATTGAGCCTTGGTATGGAAACCTGCTAAGTGGTAACTTCCAAATTCAGAGAAACCCTGGAATTAAAAAAGGGCAATCCTGAGCCAAATCCGTGTTTTGAGAAAACAAGGGGTTCTCGAACTAGAATACAAAGGAAAAGGATAGGTGCAGAGACTCAATGGAAGCTGTTCTAACGAATCGAGTTAATTACG
>ID=gene:ENSRNA049469408;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131720;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold6767:29989-30063(-)
GAAAGCCGTATTCGATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCCTATCTTTCGAGATCCACCCTAC
>ID=gene:ENSRNA049469404;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131722;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold6767:97493-97567(+)
GAAAGCCGTATTCAATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCCTATCTTCCAAGATCCACCCTAC
>ID=gene:ENSRNA049469391;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131720;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold6767:27716-27795(-)
ATGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGCATGAGAGAAAGAAGCTAGGAATCCTCTTTTCGACTCTGAC
>ID=gene:ENSRNA049469377;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131722;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold6767:96718-96795(+)
AGGAGCCGTATGAGGTGAAAATATCATGTACGGTTCTGTAAAGGGACATTAAGGGTGACTTATCTGTCGACTTTTCC
>ID=gene:ENSRNA049469365;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131723;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold6767:99652-99732(+)
AGGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGCATGAGAGAAAGAAGCGAGGAATCCTCTTTTCGACTCTGAAT
>ID=gene:ENSRNA049469360;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131720;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold6767:30747-30824(-)
AGGAGCCGTATGAGGTCAAAATCTCATGTACGGTTCTGTAAAGGTACAATAAGGGTGACTTATCTATCGACTTTTCC
>ID=gene:ENSRNA049469344;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2237275;repeat_name=RXX_Gk_DX403548.1_7560;repeat_type=Unknown::Scaffold6767:3034-3112(-)
AGAAGCCGTATGAAGCTAAGGTTTCATGTACGGTTTTGAAATAGCGGTGGGAACTATGATGTTATCATCGACTATGAT
>ID=gene:ENSRNA049468977;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2151149;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::Scaffold5346:124159-124243(-)
GAGAGCCAAATGAATCGAAAGATTCATGTTTGGTTCGGGAAGAGATCATAAAAGTTGTAAACTTACAAAATAATCTACTTACAT
>ID=gene:ENSRNA049468539;Name=Intron_gpI;biotype=sense_intronic;description=Group I catalytic intron overlaps with ID=2237288;repeat_name=LTR_AC188734.2_15331;repeat_type=LTRs::Scaffold38557:77873-78034(-)
CTACGGACATGATTGTATTGAGCCTTGATATGGAAACCTGCTAAGTGGTAACTTCCAAATTCAGAGAAACCCTGGAATTAAAAAAGGGCAATCCAGAACCAAATCCGTGTTTTGAGATAACAAGGGGTTCTCGAACTAGAATACAAAGGAAAAGGACAGCT
>ID=gene:ENSRNA049468194;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2237277;repeat_name=RXX_Gk_DX403548.1_7560;repeat_type=Unknown::Scaffold26495:46428-46506(-)
AGGAGCCGTATGAAGCTAAGGTTTCATGTACGGTTTGGCAATAGTGGTGGGAGCTGTGATGTTATTATCGACTATGAT
>ID=gene:ENSRNA049468082;Name=Intron_gpI;biotype=sense_intronic;description=Group I catalytic intron overlaps with ID=2237286;repeat_name=LTR_AC188734.2_15331;repeat_type=LTRs::Pt:46621-46827(+)
CTACGGACTTGATTGTATTGAGCCTTGGTATGGAAACCTGCTAAGTGGTAACTTCCAAATTCAGAGAAACCCTGGAATTAAAAAAGGGCAATCCTGAGCCAAATCCGTGTTTTGAGAAAACAAGGGGTTCTCGAACTAGAATACAAAGGAAAAGGATAGGTGCAGAGACTCAATGGAAGCTGTTCTAACGAATCGAGTTAATTACG
>ID=gene:ENSRNA049468068;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2151179;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::Pt:33682-33766(+)
GAGAGCCAAATGAATCGAAAGATTCATGTTTGGTTCGGGAAGAGATCATAAAAGTTGTAAACTTACAAAATAATCTACTTTCAT
>ID=gene:ENSRNA049468036;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131735;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Pt:88518-88592(-)
GAAAGCCGTATTCGATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCCTATCTTTCGAGATCCACCCTAC
>ID=gene:ENSRNA049468014;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131735;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Pt:89290-89367(-)
AGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTGTAAAGGGACAGTAAGGGTGACTTATCTGTCGACTTTTCC
>ID=gene:ENSRNA049467987;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131735;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Pt:86177-86256(-)
AGGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGCATGAGAGAAAGAAGCGAGGAATCCTCTTTTCGACTCTGAC
>ID=gene:ENSRNA049467955;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2151180;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::Pt:43104-43179(-)
AGGAGCCGTATGAGATGAAAACCTCATGTACGGTTTTGGAACGGAGATTTTTTGAATAGAATGAACGACCGTAAC
>ID=gene:ENSRNA049467949;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2238444;repeat_name=LTR_Gm_16_5235;repeat_type=LTRs::Pt:77369-77391(-)
AGGAGCTGGATGAGAAGAAACT
>ID=gene:ENSRNA049467933;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2237276;repeat_name=RXX_Gk_DX403548.1_7560;repeat_type=Unknown::Pt:111557-111635(-)
AGAAGCCGTATGAAGCTAAGGTTTCATGTACGGTTTTGAAATAGCGGTGGGAACTGTGATGTTATCATCGACTATGAT
>ID=gene:ENSRNA049467763;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2151195;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::Scaffold13377:67521-67605(+)
GAGAGCCAAATGAATCGAAAGATTCATGTTTGGTTCGGGAAGAGATCATAAAAGTTGTAAACTTACAAAATAATCTACTTTCAT
>ID=gene:ENSRNA049466658;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2151184;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::Scaffold31625:71771-71855(+)
GAGAGCCAAATGAATCGAAAGATTCATGTTTGGTTCGGGAAGAGATCATAAAAGTTGTAAACTTACAAAATAATCTACTTTCAT
>ID=gene:ENSRNA049466644;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131744;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold31625:103573-103652(-)
AGGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGCATGAGAGAAAGAAGCGAGGAATCCTCTTTTCGACTCTGAC
>ID=gene:ENSRNA049466513;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131745;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold6486:31726-31800(+)
GAAAGCCGTATTCGATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCCTATCTTTCGAGATCCACCCTAC
>ID=gene:ENSRNA049466503;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131745;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold6486:34062-34141(+)
AGGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGCATGAGAGAAAGAAGCGAGGAATCCTCTTTTCGACTCTGAC
>ID=gene:ENSRNA049465859;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131746;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold35015:82362-82436(+)
GAAAGCCGTATTCGATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCCTATCTTTCGAGATCCACCCTAC
>ID=gene:ENSRNA049465842;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131747;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold35015:99072-99151(+)
AGGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGCATGAGAGAAAGAAGCGAGGAATCCTCTTTTCGACTCTGAC
>ID=gene:ENSRNA049465829;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131746;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold35015:81588-81665(+)
AGGAGTCGTATGAGGTGAAAATCTCATGTACGGTTCTGTAAAGGGACAGTAAGGGTGACTTATCTGTCGACTTTTCC
>ID=gene:ENSRNA049462985;Name=Intron_gpI;biotype=sense_intronic;description=Group I catalytic intron overlaps with ID=1636642;repeat_name=RLG_Wilma_3B_030_O03-1;repeat_type=LTRs::Scaffold25303:66316-66375(+)
TTACAGTGTGTTGGAAAGATCCAGACATATATATCTAATTGGATGTAAGTTAGCATGAG
>ID=gene:ENSRNA049461377;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131754;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold9609:84704-84781(-)
AGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTGTAAAGGGACAGTAAGGGTGACTTATCTGTCGACTTTTCC
>ID=gene:ENSRNA049461367;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131754;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold9609:83933-84007(-)
GAAAGCCGTATTCGATGAAAGTCGTGTGTACAGCTTGGAGGGAGATCTTTCCTATCTTTCGAGATCCACCCTAC
>ID=gene:ENSRNA049461273;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131751;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold18296:27686-27760(+)
GAAAGCCGTATTCGATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCCTATCTTTCGAGATCCACCCTAA
>ID=gene:ENSRNA049461238;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131751;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold18296:30010-30089(+)
AGGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGCATGAGAGAAAGAAGCGAGGAATCCTCTTTTCGACTCTGAC
>ID=gene:ENSRNA049459534;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=311928;repeat_name=LTR_DQ537337.1_386;repeat_type=LTRs::Scaffold21256:36996-37015(-)
CTTTCGAGATCCACCCTAC
>ID=gene:ENSRNA049457705;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131758;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold47651:58917-58996(-)
AGGAGCCGTGCGAGATGAAAGTTTCATGCATGGTTTTGCATGAGAGACATAAGCGAGGAATCCTCTTTTCTACTCTGAC
>ID=gene:ENSRNA049453606;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2151247;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::Scaffold70989:50592-50656(-)
CTGAGCCGTATGAGGTAGGAAACTCTCAAGTACGGTTCTAAGGGAAGGAACTTCCTATTCCGAC
>ID=gene:ENSRNA049452472;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131766;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold47731:23245-23319(-)
GAAAGCCGTATTCGATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCCTATCTTTCGAGATCCACCCTAC
>ID=gene:ENSRNA049451811;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2151258;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::Scaffold23039:16122-16197(-)
AGGAGCCGTATGAGATGAAAACCTCATGTACGGTTTTGGAACGGAGATTTTTTGAATAGAATGAACGACCGTAAC
>ID=gene:ENSRNA049451817;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2151258;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::Scaffold23039:6784-6867(+)
GAGAGCCAAATGAATCAAAAGATTCATGTTTGGTTCGGGAAGAGATCATAAAAGTTGTAAACTTCCAAATAATCTACTTTCAT
>ID=gene:ENSRNA049450055;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2151245;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::Scaffold76953:23116-23200(-)
GAGAGCCAAATGAATCGAAAGATTCATGTTTGGTTCGGGAAGAGATCATAAAAGTTGTAAACTTACAAAATAATCTACTTTCAT
>ID=gene:ENSRNA049449845;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131768;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold67479:29162-29236(-)
GAAAGCAGTATTTGATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCCTATCTTTCGAGATCCACCCTAC
>ID=gene:ENSRNA049448506;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2237279;repeat_name=RXX_Gk_DX403548.1_7560;repeat_type=Unknown::Scaffold222281:561-639(+)
AGGAGCTGGATGAGAAGAAACTCTCATGTCCAGTTTTGCAGTAGAGATGGAACTAAGAAAGAGAACCATCGACTATAA
>ID=gene:ENSRNA049448506;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2238445;repeat_name=LTR_Gm_16_5235;repeat_type=LTRs::Scaffold222281:561-583(+)
AGGAGCTGGATGAGAAGAAACT
>ID=gene:ENSRNA049448113;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2233859;repeat_name=LTR_Os_chr_11_2029;repeat_type=LTRs::Scaffold2488:983-1030(-)
TTGAGCCGTACGAGATGAAATTTTCATATACGGCTCTTAGAGGGGGG
>ID=gene:ENSRNA049448215;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=1718338;repeat_name=DTC_Jorge_3B_096_J17-1;repeat_type=Type II Transposons::Scaffold191614:1020-1070(+)
AGTGGCTAAACCTGAAGAACAACTGTTCTAATTTAAGATTCTATTGCTAT
>ID=gene:ENSRNA049478286;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131785;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold125945:6862-6941(-)
AGGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGCATGAGAGAAAGAAGCGAGGAATCCTCTTTTCGACTCTGAC
>ID=gene:ENSRNA049476690;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=760173;repeat_name=LTR_AC207944.1_149;repeat_type=LTRs::Scaffold81036:7292-7315(-)
AGATGGCTCGCACTATGCTTGAT
>ID=gene:ENSRNA049447640;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131845;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::C141262992:975-1054(+)
GGGAGTCATGCAAGATGAAAGTCTCATGCATGGTTCTGCATGAGAGAAAGAAGCAAGAAATCCTCTTTTTGACTCAGAT
>ID=gene:ENSRNA049475166;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131852;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold108132:1861-1935(-)
GAAAGTTGTATTCAATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCCTATCTTTCGAGATCCACCCTAT
>ID=gene:ENSRNA049474513;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131770;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold14474:161-238(+)
AGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTATAAAGGGACAGTAAGGGTGACTTATCTGTCGACTTTTCC
>ID=gene:ENSRNA049474457;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131769;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold113167:4149-4216(+)
AGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTGTAAAGGGACAGTAAGGGAAATTTCTCAGT
>ID=gene:ENSRNA049473742;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131850;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold95663:247-321(-)
GAAAGCCGTATTCGATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCCTATCTTTCGAGATCCACCCTAC
>ID=gene:ENSRNA049473316;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=1404739;repeat_name=trep765;repeat_type=Type II Transposons::Scaffold169699:71-94(-)
GGGGAGTTATTGTCTATCACCGT
>ID=gene:ENSRNA049473226;Name=Intron_gpI;biotype=sense_intronic;description=Group I catalytic intron overlaps with ID=1082458;repeat_name=RLG_Sakura_3B_068_G05-1;repeat_type=LTRs::Scaffold13669:43605-43699(+)
GATTCTTTTTTCATAAGATTAATAGACAAATTCCTCACGACCACCAATTTATTTCATAATTTTTGGAGTAGCAGAAGTATGGTTTCTGTTCAGA
>ID=gene:ENSRNA049471514;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131714;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold27045:57012-57086(-)
GAAAGCCGTATTCGATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCCAATCCTTCGAGATCCACCTTAC
>ID=gene:ENSRNA049471028;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131700;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold4709:136316-136359(+)
AGGAGCCGTTTGAGGTGAAAATCTCATGTACGGTTCTTTAGAG
>ID=gene:ENSRNA049470859;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131716;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold20378:156067-156146(+)
AGGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGCATGAGAGAAAGAAGCGAGGAATCCTCTTTTCGACTCTGAC
>ID=gene:ENSRNA049470540;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2131717;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Scaffold21061:109580-109659(-)
AGGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGCATGAGAGAAAGAAGCGAGGAATCCTCTTTTCGACTCTGAC
