AmTr_v1.0_scaffold01373	Ensembl_Plants	snRNA	1879	1980	.	+	.	ID=gene:ENSRNA049461466	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTCAGAGACATCAGTTAGAATTGGAATGATACATAGAAAATTAGCATGGTCACTGCGCAAAGAAGGCACAAATCTAAAAATGGTCCAAGAGAGAGAG	AmTr_v1.0_scaffold01373	Ensembl_Plants	LTR	1878	1971	345	+	.	ID=128567	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=GTCTCTTCAGAGACATCAGTTAGAATTGGAATGATACATAGAAAATTAGCATGGTCACTGCGCAAAGAAGGCACAAATCTAAAAATGGTCCAA
AmTr_v1.0_scaffold03865	Ensembl_Plants	snRNA	2004	2099	.	-	.	ID=gene:ENSRNA049461141	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=TTATTCACCACAGTAAATTGGAATGACACAGAGAAGATTAGCATGGCCCCTGCACAAGGATGACATTTACCCAGAAACAACAAGGAAAATAATTAT	AmTr_v1.0_scaffold03865	Ensembl_Plants	LTR	2035	2086	343	-	.	ID=128568	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TAAATTGGAATGACACAGAGAAGATTAGCATGGCCCCTGCACAAGGATGAC
AmTr_v1.0_scaffold02628	Ensembl_Plants	snRNA	2536	2638	.	+	.	ID=gene:ENSRNA049460980	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTCGGAGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTT	AmTr_v1.0_scaffold02628	Ensembl_Plants	LTR	2534	2640	671	+	.	ID=128569	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TGTCTCTTCGGAGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTTTT
AmTr_v1.0_scaffold00002	Ensembl_Plants	snRNA	8688938	8689048	.	-	.	ID=gene:ENSRNA049460513	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=TTTTGAACCATTAAAAACACAACTTTCTCCCAAATATAAGGAGAGAGAGAAGATTAGCATGGCCCCTGCATAAGGATGACACGCACAAATCGAAAAATGGGGCAACTTTTT	AmTr_v1.0_scaffold00002	Ensembl_Plants	LTR	8688995	8689029	228	+	.	ID=91548	repeat_name=LTR_AC197531.2_9792	repeat_type=LTRs	sequence=TCTTCTCTCTCTCCTTATATTTGGGAGAAAGTTG
AmTr_v1.0_scaffold00002	Ensembl_Plants	snRNA	8688938	8689048	.	-	.	ID=gene:ENSRNA049460513	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=TTTTGAACCATTAAAAACACAACTTTCTCCCAAATATAAGGAGAGAGAGAAGATTAGCATGGCCCCTGCATAAGGATGACACGCACAAATCGAAAAATGGGGCAACTTTTT	AmTr_v1.0_scaffold00002	Ensembl_Plants	LTR	8688937	8689003	390	-	.	ID=128562	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=AGAGAAGATTAGCATGGCCCCTGCATAAGGATGACACGCACAAATCGAAAAATGGGGCAACTTTTT
AmTr_v1.0_scaffold00103	Ensembl_Plants	snRNA	645684	645802	.	-	.	ID=gene:ENSRNA049460424	Name=U5	biotype=snRNA	description=U5 spliceosomal RNA	sequence=AGCCGCGTGGTGAGCACAAGGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCTCGCCACTTTAAAGCGGCATACGCCTATTTTTGGCAGGGGCCTCTTCTCTAGAGCCCC	AmTr_v1.0_scaffold00103	Ensembl_Plants	LTR	645698	645805	664	-	.	ID=60560	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=CGGAGCCGCGTGGTGAGCACAAGGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCTCGCCACTTTAAAGCGGCATACGCCTATTTTTGGCAGGGGCCT
AmTr_v1.0_scaffold00103	Ensembl_Plants	snRNA	645684	645802	.	-	.	ID=gene:ENSRNA049460424	Name=U5	biotype=snRNA	description=U5 spliceosomal RNA	sequence=AGCCGCGTGGTGAGCACAAGGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCTCGCCACTTTAAAGCGGCATACGCCTATTTTTGGCAGGGGCCTCTTCTCTAGAGCCCC	AmTr_v1.0_scaffold00103	Ensembl_Plants	LTR	645752	645815	403	+	.	ID=145971	repeat_name=LTR_Mt_chr_02_74	repeat_type=LTRs	sequence=TCTTTAGTAAAAGGCGAAAGAATAGTTCGCCTTGTGCTCACCACGCGGCTCCGTGCTTTACAA
AmTr_v1.0_scaffold00168	Ensembl_Plants	snRNA	792932	793025	.	+	.	ID=gene:ENSRNA049460255	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTTCCTTTGGGGGCATCCGTTAAAATTAGAACAATGCCGAGAACATTAGCCTTACCCCTCATCGAGGATGACACGCACGATGGTCCAATTTTTT	AmTr_v1.0_scaffold00168	Ensembl_Plants	LTR	792927	793027	332	+	.	ID=128559	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=AGTTGTTCCTTTGGGGGCATCCGTTAAAATTAGAACAATGCCGAGAACATTAGCCTTACCCCTCATCGAGGATGACACGCACGATGGTCCAATTTTTTTT
AmTr_v1.0_scaffold00147	Ensembl_Plants	snRNA	902824	902984	.	-	.	ID=gene:ENSRNA049459902	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=ATACTTACCTGGGCGGGGTCAATCGGTGTTCCGAAAGGCTGATGGCCTAGGGCGGCCGTCCCCATTGCACGTGCGGGGGTGGGTCACCCTACCATCTCTCTTAATGAGGGAATGGACGTCATAATTTGTGACAGGGGGGTACGCGTTCGCGCGGCCCCCGC	AmTr_v1.0_scaffold00147	Ensembl_Plants	LTR	902818	902988	422	-	.	ID=128179	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=AAGCATACTTACCTGGGCGGGGTCAATCGGTGTTCCGAAAGGCTGATGGCCTAGGGCGGCCGTCCCCATTGCACGTGCGGGGGTGGGTCACCCTACCATCTCTCTTAATGAGGGAATGGACGTCATAATTTGTGACAGGGGGGTACGCGTTCGCGCGGCCCCCGCCAATT
AmTr_v1.0_scaffold00006	Ensembl_Plants	snRNA	9079813	9079920	.	+	.	ID=gene:ENSRNA049459136	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=ATCTCTTGAGAGGCATTCGATAAAATTGGAACGATACAGAGAAGATTAGTATAGCCCCTAAACAAGAACGACACGCACATATCGAGAGATAGTCTAAAAAAAATCTTT	AmTr_v1.0_scaffold00006	Ensembl_Plants	LTR	9079814	9079909	356	+	.	ID=128533	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=CTCTTGAGAGGCATTCGATAAAATTGGAACGATACAGAGAAGATTAGTATAGCCCCTAAACAAGAACGACACGCACATATCGAGAGATAGTCTAA
AmTr_v1.0_scaffold00006	Ensembl_Plants	snRNA	7345482	7345584	.	+	.	ID=gene:ENSRNA049459091	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=ATCTCTTCAGTCATATCTGATAAAAAAGGAACGTTACAAAGGAGATCAGAATGGCCACTTCACAAGGATGACAAGCACAAAATGAGGAATGGTCCCAGCCAAT	AmTr_v1.0_scaffold00006	Ensembl_Plants	LTR	7345511	7345576	244	+	.	ID=128526	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=ACGTTACAAAGGAGATCAGAATGGCCACTTCACAAGGATGACAAGCACAAAATGAGGAATGGTCC
AmTr_v1.0_scaffold00009	Ensembl_Plants	snRNA	5304413	5304513	.	+	.	ID=gene:ENSRNA049458882	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTCGGAGACATCCGATAAAATTGGAACAGATACAGAGAAGATTAGCAAGGCCCTGCGCTGATGATACCAACAAATTGAGAAATGGTCCAAATTTTT	AmTr_v1.0_scaffold00009	Ensembl_Plants	LTR	5304411	5304515	536	+	.	ID=128516	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TGTCTCTTCGGAGACATCCGATAAAATTGGAACAGATACAGAGAAGATTAGCAAGGCCCTGCGCTGATGATACCAACAAATTGAGAAATGGTCCAAATTTTTTT
AmTr_v1.0_scaffold00009	Ensembl_Plants	snRNA	5618050	5618151	.	+	.	ID=gene:ENSRNA049458844	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCCCTGTGAAGAGACCCACTAAAATTGGAACAGAACAGAGAAGATTAGCATAGCCCATGCACAAAGATGACATGCACAATAGAAAAATAGTCCAAATCTTG	AmTr_v1.0_scaffold00009	Ensembl_Plants	LTR	5618050	5618145	394	+	.	ID=128517	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TCCCTGTGAAGAGACCCACTAAAATTGGAACAGAACAGAGAAGATTAGCATAGCCCATGCACAAAGATGACATGCACAATAGAAAAATAGTCCAA
AmTr_v1.0_scaffold00011	Ensembl_Plants	snRNA	8324106	8324208	.	-	.	ID=gene:ENSRNA049458709	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCATCGGAGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCTTGCGCAAGGATGACATGCACAATTAGAGAAATGGTCCAAATTTTT	AmTr_v1.0_scaffold00011	Ensembl_Plants	LTR	8324102	8324209	641	-	.	ID=128558	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TGTCTCATCGGAGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCTTGCGCAAGGATGACATGCACAATTAGAGAAATGGTCCAAATTTTTTTG
AmTr_v1.0_scaffold00023	Ensembl_Plants	snRNA	3007331	3007432	.	-	.	ID=gene:ENSRNA049458681	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTCGAATACATCCAATAAAATTGGAACAATACAGAGAAGATTAGTATAGCCCTTGCACAAGGATAACAACATTAGAAAACATGGATTGCTCGTTCAC	AmTr_v1.0_scaffold00023	Ensembl_Plants	LTR	3007360	3007434	399	-	.	ID=128572	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TTGTCTCTTCGAATACATCCAATAAAATTGGAACAATACAGAGAAGATTAGTATAGCCCTTGCACAAGGATAAC
AmTr_v1.0_scaffold00016	Ensembl_Plants	snRNA	5303243	5303354	.	-	.	ID=gene:ENSRNA049458583	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GCCTTTTTGAAATGCCTTGGGAGACATCTAATAAAATTGGAACAATAGAAAAGATTAACATGGCCTATGTGCAAGGATGAAATGCACAAATCAAGAAATGGTCAAATTTTAA	AmTr_v1.0_scaffold00016	Ensembl_Plants	LTR	5303245	5303339	397	-	.	ID=128523	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=CTTGGGAGACATCTAATAAAATTGGAACAATAGAAAAGATTAACATGGCCTATGTGCAAGGATGAAATGCACAAATCAAGAAATGGTCAAATTT
AmTr_v1.0_scaffold00029	Ensembl_Plants	snRNA	5326656	5326764	.	+	.	ID=gene:ENSRNA049458409	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=CCTTTTATGTCTTCGGAAGCATCCAATACAATTGGAATGATACAGAGAAGATTAGCATGGCCCCTGTGCAATGACGACACGCACGAATCAAGAAATCATCCAAATTTAC	AmTr_v1.0_scaffold00029	Ensembl_Plants	LTR	5326660	5326762	403	+	.	ID=128553	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TATGTCTTCGGAAGCATCCAATACAATTGGAATGATACAGAGAAGATTAGCATGGCCCCTGTGCAATGACGACACGCACGAATCAAGAAATCATCCAAATTT
AmTr_v1.0_scaffold00043	Ensembl_Plants	snRNA	3529089	3529200	.	-	.	ID=gene:ENSRNA049458106	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTTTTTGGAGACATTCAATAAAATTGAAACGATACAGAGAAGATTAGCATGGCCCTGTCATCTCTTGCGCAAGGATGACACGCACAAATCGAGAAATAGTCCAAATTTCT	AmTr_v1.0_scaffold00043	Ensembl_Plants	LTR	3529087	3529201	501	-	.	ID=128560	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TGTCTTTTTGGAGACATTCAATAAAATTGAAACGATACAGAGAAGATTAGCATGGCCCTGTCATCTCTTGCGCAAGGATGACACGCACAAATCGAGAAATAGTCCAAATTTCTT
AmTr_v1.0_scaffold00043	Ensembl_Plants	snRNA	3541288	3541388	.	-	.	ID=gene:ENSRNA049458087	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=ATTGCTTTCGGAGATATTCGATAAAATTGGAACGATACGATTAGCAAGGCCCTGACTGCACAACGATGACACGCACAAATTGAGAAATAGCCCAAATTTTT	AmTr_v1.0_scaffold00043	Ensembl_Plants	LTR	3541286	3541381	349	-	.	ID=128561	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TCGGAGATATTCGATAAAATTGGAACGATACGATTAGCAAGGCCCTGACTGCACAACGATGACACGCACAAATTGAGAAATAGCCCAAATTTTTT
AmTr_v1.0_scaffold00003	Ensembl_Plants	snRNA	1123091	1123287	.	+	.	ID=gene:ENSRNA049457839	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTGGCCCATCGGGCCACATGATATTAAATTAATTTTTTAGTGGGGGAGGGACCACCTCGCTAGCTTGCTAGTGGGTCCCTTGAGCGTCGACCGTGCGTAGCACTGCGGCATGGGCCTGGCGCACCCCTA	AmTr_v1.0_scaffold00003	Ensembl_Plants	LTR	1123096	1123163	278	+	.	ID=60542	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=TTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTGGC
AmTr_v1.0_scaffold00003	Ensembl_Plants	snRNA	9104145	9104305	.	-	.	ID=gene:ENSRNA049457812	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=ATACTTACCTGGGCGGGGTCAATCGGTGTTCAAGAAGGCTGATGGCTTAGGATGGCTGCCCCCATTGCACATGCGGGGGTGGGTCACTCTACCATCTCTCTTAATGAGGGAATGGACGTCATAATTTGTGGTAGGGGGGTACGCGTTCGCGCGGCCCCCAC	AmTr_v1.0_scaffold00003	Ensembl_Plants	LTR	9104147	9104309	477	-	.	ID=128177	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=AAGCATACTTACCTGGGCGGGGTCAATCGGTGTTCAAGAAGGCTGATGGCTTAGGATGGCTGCCCCCATTGCACATGCGGGGGTGGGTCACTCTACCATCTCTCTTAATGAGGGAATGGACGTCATAATTTGTGGTAGGGGGGTACGCGTTCGCGCGGCCCC
AmTr_v1.0_scaffold00045	Ensembl_Plants	snRNA	3061794	3061990	.	-	.	ID=gene:ENSRNA049457470	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTAGCTCATTAGGTCACATGATATTAAATTAATTTTTCAGCGGGGGAGGGGCCGCCACACTAGCTTGCTAGTGGGCCCCTTGAGCGTCGCCCTTGCGCTGCACTACTGCAAGGGTCGAGCGCACCCTTA	AmTr_v1.0_scaffold00045	Ensembl_Plants	LTR	3061915	3061985	320	-	.	ID=60555	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=TTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTAGCTC
AmTr_v1.0_scaffold00045	Ensembl_Plants	snRNA	2336107	2336206	.	-	.	ID=gene:ENSRNA049457449	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTTGGAGACATCTGATAAAGTTGGAAAAATGCAGGGAAGATTAGCATGGTCCCCGCACAAGGATACATAGAAATCTAGAAGTGTGATACCATCCT	AmTr_v1.0_scaffold00045	Ensembl_Plants	LTR	2336119	2336206	338	-	.	ID=128530	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=GTCTCTTTGGAGACATCTGATAAAGTTGGAAAAATGCAGGGAAGATTAGCATGGTCCCCGCACAAGGATACATAGAAATCTAGAAGT
AmTr_v1.0_scaffold00045	Ensembl_Plants	snRNA	1718672	1718776	.	-	.	ID=gene:ENSRNA049457428	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTCGGAGACATCCGATAAAATTGGAACGATATAGAGATAATCAGCTTGGCCCCTGCACACAAGGATGACATGCAAAAATCGAGAAATAGTCTAAATTTGT	AmTr_v1.0_scaffold00045	Ensembl_Plants	LTR	1718674	1718776	425	-	.	ID=128514	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=GTCTCTTCGGAGACATCCGATAAAATTGGAACGATATAGAGATAATCAGCTTGGCCCCTGCACACAAGGATGACATGCAAAAATCGAGAAATAGTCTAAATT
AmTr_v1.0_scaffold00040	Ensembl_Plants	snRNA	1215241	1215437	.	+	.	ID=gene:ENSRNA049457185	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTGGTCCATCGGACCACACGATATTAAATTAATTTTTCAGTGGGGGAGGGGCCACTACACCAGCTTGCTGGTGGGCACCTCAAGCGTCGCTCATGCGTTGCACTACAGCACGGGCCTGGCGCACCCCTA	AmTr_v1.0_scaffold00040	Ensembl_Plants	LTR	1215246	1215312	266	+	.	ID=60567	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=TTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTGG
AmTr_v1.0_scaffold00040	Ensembl_Plants	snRNA	3371697	3371799	.	-	.	ID=gene:ENSRNA049457173	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCCCTTCGGAGACATCCGATAAAATTGGAACGATATAGAGACGATCAGCATGGCCTTTGCGCAAGGATGACACGCACAAATCGAGAAATAGTCCAAATTTTT	AmTr_v1.0_scaffold00040	Ensembl_Plants	LTR	3371695	3371799	541	-	.	ID=128545	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=GTCCCTTCGGAGACATCCGATAAAATTGGAACGATATAGAGACGATCAGCATGGCCTTTGCGCAAGGATGACACGCACAAATCGAGAAATAGTCCAAATTTTTT
AmTr_v1.0_scaffold00007	Ensembl_Plants	snRNA	2984211	2984309	.	-	.	ID=gene:ENSRNA049457119	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=ATATTCAAAAACATCTGATAAAATTGGATTGATACAGAGAAGATTAGCATGACCGGTGCAAGGATGACACGAATAAATCGAGAAATAGTCCAAATTTTT	AmTr_v1.0_scaffold00007	Ensembl_Plants	LTR	2984210	2984305	426	-	.	ID=128537	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TCAAAAACATCTGATAAAATTGGATTGATACAGAGAAGATTAGCATGACCGGTGCAAGGATGACACGAATAAATCGAGAAATAGTCCAAATTTTT
AmTr_v1.0_scaffold00007	Ensembl_Plants	snRNA	2271868	2271970	.	-	.	ID=gene:ENSRNA049457105	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=ATCCCTTTGGAGACATCCGATAAGATTGGAACGAGACAGAAAAGATTAACGTGGCCCCTGCGCAAGGATAACAAGCACAAATCGAGAAATGCTCGAACTGAGA	AmTr_v1.0_scaffold00007	Ensembl_Plants	LTR	2271872	2271969	378	-	.	ID=128536	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TCCCTTTGGAGACATCCGATAAGATTGGAACGAGACAGAAAAGATTAACGTGGCCCCTGCGCAAGGATAACAAGCACAAATCGAGAAATGCTCGAAC
AmTr_v1.0_scaffold00049	Ensembl_Plants	snRNA	2949028	2949224	.	+	.	ID=gene:ENSRNA049457092	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGCCTAAGATTAAGTGTAGTATCAGTTCTTATCAGTATAATATCTGATACGTGGTCCATCGGACCACACGATATTAAATTAATTTTTCAGTGGGGGAGGGGCTTCCACGCTAGTTAGCTAGTCGGTCCCTTGAGCATTTACCATGCGTTGCACTACTGCACGGGCATGGCGCACCCCTA	AmTr_v1.0_scaffold00049	Ensembl_Plants	LTR	2949018	2949099	245	+	.	ID=60553	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=TCATAAAGCATACCTTTCTCGGCCTTTTGCCTAAGATTAAGTGTAGTATCAGTTCTTATCAGTATAATATCTGATACGTGG
AmTr_v1.0_scaffold00049	Ensembl_Plants	snRNA	358016	358122	.	+	.	ID=gene:ENSRNA049457078	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GAATTTTGGATATCCATTCAATAAAATCAGAACGATACAGAGAAGATTAACATGGCTTCCTGCACAAGGATGAGACACACACAAATTGAAAAATAGCCCAAAAACTT	AmTr_v1.0_scaffold00049	Ensembl_Plants	LTR	358039	358116	303	+	.	ID=128510	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=AATCAGAACGATACAGAGAAGATTAACATGGCTTCCTGCACAAGGATGAGACACACACAAATTGAAAAATAGCCCAA
AmTr_v1.0_scaffold00141	Ensembl_Plants	snRNA	149557	149659	.	-	.	ID=gene:ENSRNA049456935	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTCAGAGACATTTGATAAAATTGGAACGATACAGAGAAGATTAGCATGTCCCCTGTGTGAGGATAGCATGCACAAATTGACAAATGGTCTAAATTTTT	AmTr_v1.0_scaffold00141	Ensembl_Plants	LTR	149553	149659	513	-	.	ID=128556	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=GTCTCTTCAGAGACATTTGATAAAATTGGAACGATACAGAGAAGATTAGCATGTCCCCTGTGTGAGGATAGCATGCACAAATTGACAAATGGTCTAAATTTTTAAG
AmTr_v1.0_scaffold00141	Ensembl_Plants	snRNA	87672	87774	.	-	.	ID=gene:ENSRNA049456920	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTTTTCGGAGACATCCGATAAAATTGGAACGATACAGAGAATATTAGCATAGCTCTTGCGCGAGGATGAAATGCACAAATCGAGAAATAGTCCAAATTTGT	AmTr_v1.0_scaffold00141	Ensembl_Plants	LTR	87674	87775	495	-	.	ID=128555	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TGTCTTTTCGGAGACATCCGATAAAATTGGAACGATACAGAGAATATTAGCATAGCTCTTGCGCGAGGATGAAATGCACAAATCGAGAAATAGTCCAAATT
AmTr_v1.0_scaffold00142	Ensembl_Plants	snRNA	563158	563260	.	+	.	ID=gene:ENSRNA049456888	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTCGGAGACATCCAATAAAATTGGAACAATACAAAAAAAATTAGCATGGCCCCTGCATAAGGATGACACACACAAATTGGTAGATGGTTTAAATTTGT	AmTr_v1.0_scaffold00142	Ensembl_Plants	LTR	563156	563258	494	+	.	ID=128546	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TGTCTCTTCGGAGACATCCAATAAAATTGGAACAATACAAAAAAAATTAGCATGGCCCCTGCATAAGGATGACACACACAAATTGGTAGATGGTTTAAATTT
AmTr_v1.0_scaffold00142	Ensembl_Plants	snRNA	707186	707281	.	+	.	ID=gene:ENSRNA049456857	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTCGAAAGCATCCGATAAAATTGAAATGATACAGAGAAGATTAGCATGGCACTTGCACAAGGTGACAAATCTTTAGTAGTAAAAACTATTT	AmTr_v1.0_scaffold00142	Ensembl_Plants	LTR	707186	707257	297	+	.	ID=128547	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TCTCTTCGAAAGCATCCGATAAAATTGAAATGATACAGAGAAGATTAGCATGGCACTTGCACAAGGTGACA
AmTr_v1.0_scaffold00077	Ensembl_Plants	snRNA	3147424	3147526	.	+	.	ID=gene:ENSRNA049456606	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTTTTCGGAAACATCTGATAAAATTAGAACAATACAAATAATATTAGCATAGCCCATGTCCAAGGATGACACGCTCAAATCAAGAAATGGTCCAAATATCA	AmTr_v1.0_scaffold00077	Ensembl_Plants	LTR	3147424	3147520	429	+	.	ID=128519	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TCTTTTCGGAAACATCTGATAAAATTAGAACAATACAAATAATATTAGCATAGCCCATGTCCAAGGATGACACGCTCAAATCAAGAAATGGTCCAA
AmTr_v1.0_scaffold00092	Ensembl_Plants	snRNA	1601558	1601656	.	-	.	ID=gene:ENSRNA049455966	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTCAGAAACATCCAATAAAATTGGAATTACATAGAGAAATTAGCATGGCCCCTACGCATGGGTAACACACAATCGAGAATTGGTATGAATTTGT	AmTr_v1.0_scaffold00092	Ensembl_Plants	LTR	1601556	1601656	337	-	.	ID=128527	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=GTCTCTTCAGAAACATCCAATAAAATTGGAATTACATAGAGAAATTAGCATGGCCCCTACGCATGGGTAACACACAATCGAGAATTGGTATGAATTTGTT
AmTr_v1.0_scaffold00095	Ensembl_Plants	snRNA	577679	577875	.	-	.	ID=gene:ENSRNA049455934	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTGGTCTATGTGATCACATGATATTAAATTAATTTTTCAGTGGGGGAGGGTCCACCACACTAGCTTGCTAGTGGGTCCCTCGAGTGTCGCCCATGAGTTGCACTACTGCACGGGCCTGGCGCACCCCTA	AmTr_v1.0_scaffold00095	Ensembl_Plants	LTR	577800	577870	271	-	.	ID=60556	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=TTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTGGTCT
AmTr_v1.0_scaffold00095	Ensembl_Plants	snRNA	2157438	2157540	.	-	.	ID=gene:ENSRNA049455924	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCCCTTCGGGGACATCTGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTT	AmTr_v1.0_scaffold00095	Ensembl_Plants	LTR	2157436	2157545	665	-	.	ID=128529	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TGCTTGTCCCTTCGGGGACATCTGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTTT
AmTr_v1.0_scaffold00095	Ensembl_Plants	snRNA	2151352	2151454	.	+	.	ID=gene:ENSRNA049455914	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTTGGAGACATCTGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTT	AmTr_v1.0_scaffold00095	Ensembl_Plants	LTR	2151351	2151459	680	+	.	ID=128528	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=GTCTCTTTGGAGACATCTGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTTTTTAA
AmTr_v1.0_scaffold00001	Ensembl_Plants	snRNA	3566910	3567012	.	+	.	ID=gene:ENSRNA049455846	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTTGGAGACATCCTATAAAATTAGAACGATACAGATAAGATTAGCATGGCCTTTGCGCAAGGATGACACTAACAAATCGAAAAATGGTCCAATTTTTT	AmTr_v1.0_scaffold00001	Ensembl_Plants	LTR	3566900	3567012	601	+	.	ID=128512	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TTCGTGCTTGTCTCTTTGGAGACATCCTATAAAATTAGAACGATACAGATAAGATTAGCATGGCCTTTGCGCAAGGATGACACTAACAAATCGAAAAATGGTCCAATTTTTT
AmTr_v1.0_scaffold00001	Ensembl_Plants	snRNA	7337087	7337189	.	-	.	ID=gene:ENSRNA049455833	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTCAGAGACATCCGATAAAATTGGTACAATACAGAGACGATTAGCAAGGCCCTTGCGTAAGGATGACATGCACAAATCGAGAAATGGTCAAATTTTAA	AmTr_v1.0_scaffold00001	Ensembl_Plants	LTR	7337089	7337189	511	-	.	ID=128522	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=GTCTCTTCAGAGACATCCGATAAAATTGGTACAATACAGAGACGATTAGCAAGGCCCTTGCGTAAGGATGACATGCACAAATCGAGAAATGGTCAAATTT
AmTr_v1.0_scaffold00001	Ensembl_Plants	snRNA	3150937	3151039	.	-	.	ID=gene:ENSRNA049455820	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTATCTTCGGAGACCTCCGTTAAAATCGGAACGATACAGAAAAGATGAACATGGCCTGTGCCCAAGGATGACACGCACAAGTCGAAAAATGGTCCAATTTTAG	AmTr_v1.0_scaffold00001	Ensembl_Plants	LTR	3150939	3151042	488	-	.	ID=128511	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=CTTGTATCTTCGGAGACCTCCGTTAAAATCGGAACGATACAGAAAAGATGAACATGGCCTGTGCCCAAGGATGACACGCACAAGTCGAAAAATGGTCCAATTT
AmTr_v1.0_scaffold00001	Ensembl_Plants	snRNA	3787650	3787752	.	+	.	ID=gene:ENSRNA049455800	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTTGGAAACATCTTATAAAATTGGAATGATATAGAGATGATTGACATGGCCCTGTGCAATGATGATACACACAAATCGAAAAAATGGTCCAAATTTTT	AmTr_v1.0_scaffold00001	Ensembl_Plants	LTR	3787649	3787754	483	+	.	ID=128513	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=GTCTCTTTGGAAACATCTTATAAAATTGGAATGATATAGAGATGATTGACATGGCCCTGTGCAATGATGATACACACAAATCGAAAAAATGGTCCAAATTTTTTT
AmTr_v1.0_scaffold00001	Ensembl_Plants	snRNA	9554758	9554873	.	-	.	ID=gene:ENSRNA049455780	Name=U5	biotype=snRNA	description=U5 spliceosomal RNA	sequence=AGCCGTGTGATGAGCACAGAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCTCGTCACTCGAAGCGGCATACGCCTATTTTTGAAAGGGTGTCTCTATCGAGACTC	AmTr_v1.0_scaffold00001	Ensembl_Plants	LTR	9554775	9554876	764	-	.	ID=60561	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=CGGAGCCGTGTGATGAGCACAGAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCTCGTCACTCGAAGCGGCATACGCCTATTTTTGAAAGG
AmTr_v1.0_scaffold00065	Ensembl_Plants	snRNA	3934634	3934734	.	+	.	ID=gene:ENSRNA049455652	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTCGGACACCTCCGATAAATAGGAATGATATAGAGAAGATTAGCATGCTCCTGTGCAATGATAACTTGCACAAATCGAGAAATAGTCCAAATTTTT	AmTr_v1.0_scaffold00065	Ensembl_Plants	LTR	3934634	3934753	527	+	.	ID=128557	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TCTCTTCGGACACCTCCGATAAATAGGAATGATATAGAGAAGATTAGCATGCTCCTGTGCAATGATAACTTGCACAAATCGAGAAATAGTCCAAATTTTTTGTAAGGCGTCGTGGTCTA
AmTr_v1.0_scaffold00110	Ensembl_Plants	snRNA	1535305	1535410	.	-	.	ID=gene:ENSRNA049455543	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=TCTTGTCACTTTGGAAGAATTCGAAAAAGTTGGAATGATACAGAGAAGATTAGCATGGCCCCAGCTCGAAGATGACACACAAATATTAATTTGTCTCCTAACTTAT	AmTr_v1.0_scaffold00110	Ensembl_Plants	LTR	1535318	1535409	297	-	.	ID=128550	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=CTTGTCACTTTGGAAGAATTCGAAAAAGTTGGAATGATACAGAGAAGATTAGCATGGCCCCAGCTCGAAGATGACACACAAATATTAATTT
AmTr_v1.0_scaffold00167	Ensembl_Plants	snRNA	554608	554712	.	+	.	ID=gene:ENSRNA049455433	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=TGGGTTGTTTCTTCCAAATCCGATAAATTAAAATAATATAGAGAAGATTAGCATGGCCCCTGTGCAAGGAAGACACACACAACTTGAGAAATGGTGTTTTACTTA	AmTr_v1.0_scaffold00167	Ensembl_Plants	LTR	554631	554702	408	+	.	ID=128554	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=AAATTAAAATAATATAGAGAAGATTAGCATGGCCCCTGTGCAAGGAAGACACACACAACTTGAGAAATGGT
AmTr_v1.0_scaffold00165	Ensembl_Plants	snRNA	450289	450391	.	+	.	ID=gene:ENSRNA049455381	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTCGGAGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTT	AmTr_v1.0_scaffold00165	Ensembl_Plants	LTR	450287	450393	671	+	.	ID=128563	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TGTCTCTTCGGAGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTTTT
AmTr_v1.0_scaffold00165	Ensembl_Plants	snRNA	456609	456711	.	-	.	ID=gene:ENSRNA049455369	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTTGGAGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTT	AmTr_v1.0_scaffold00165	Ensembl_Plants	LTR	456603	456711	646	-	.	ID=128564	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=GTCTCTTTGGAGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTTTTTTA
AmTr_v1.0_scaffold00007	Ensembl_Plants	snRNA	2271621	2271729	.	-	.	ID=gene:ENSRNA049455302	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GAGAGAGCCCTCTCTCTAAAATTAAAATTGGAACTATATAGAGAAGAGAAGATTAGCATGTCCCCTGCGCAACAATAACACGCACAAATCAATAAAGCCAACGATAACA	AmTr_v1.0_scaffold00007	Ensembl_Plants	LTR	2271643	2271705	303	-	.	ID=128535	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=AAATTGGAACTATATAGAGAAGAGAAGATTAGCATGTCCCCTGCGCAACAATAACACGCACA
AmTr_v1.0_scaffold00024	Ensembl_Plants	snRNA	5945976	5946084	.	+	.	ID=gene:ENSRNA049455241	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTGATTCAAAACATATGAAGACATCCAATAAAATTGGAATGATACAGAGAAGATTAGCATGGTCCCTGCGCAAAGATGACACACAAACCAAGAAATGGTCCAAATTTTA	AmTr_v1.0_scaffold00024	Ensembl_Plants	LTR	5945992	5946083	407	+	.	ID=128548	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=AAGACATCCAATAAAATTGGAATGATACAGAGAAGATTAGCATGGTCCCTGCGCAAAGATGACACACAAACCAAGAAATGGTCCAAATTTT
AmTr_v1.0_scaffold00024	Ensembl_Plants	snRNA	4498917	4499017	.	-	.	ID=gene:ENSRNA049455225	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=AGAAACTTTGGTTTTGAAAACACAAAATATAAAATAAACTAAAGAAGACATGGCCCCTACGCAAGGATGACATGCACAATCGAGAAATGGTCCAAAATTTT	AmTr_v1.0_scaffold00024	Ensembl_Plants	LTR	4498913	4498977	337	-	.	ID=128539	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=AAAGAAGACATGGCCCCTACGCAAGGATGACATGCACAATCGAGAAATGGTCCAAAATTTTTTT
AmTr_v1.0_scaffold00059	Ensembl_Plants	snRNA	1645147	1645249	.	+	.	ID=gene:ENSRNA049455080	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCCTCGGAGACATTCGCTAAAATTGAAACGATAAAGAGAAGATTAACACAGCTCATTTTCAAGGATTACACGCACCAATCATGAAATGATAGAGTGGGAG	AmTr_v1.0_scaffold00059	Ensembl_Plants	LTR	1645147	1645223	333	+	.	ID=128515	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TCTCCTCGGAGACATTCGCTAAAATTGAAACGATAAAGAGAAGATTAACACAGCTCATTTTCAAGGATTACACGCA
AmTr_v1.0_scaffold00071	Ensembl_Plants	snRNA	1857543	1857702	.	-	.	ID=gene:ENSRNA049455033	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=ATACTTACCTGGACGGGGTCAATCGGTGATCATGTGGGCCGATGGCCTAGGGTGGCTGCCTTCATTGCACTTAGAGGGTGGGTCCCCCTAGCATCTCCCCAAGTGGGAGAATGCACGTCATAATTTGTGGTAGGGGGGTACGCGTTCGCGCGGCCCCCAC	AmTr_v1.0_scaffold00071	Ensembl_Plants	LTR	1857545	1857706	628	-	.	ID=128167	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=AAGCATACTTACCTGGACGGGGTCAATCGGTGATCATGTGGGCCGATGGCCTAGGGTGGCTGCCTTCATTGCACTTAGAGGGTGGGTCCCCCTAGCATCTCCCCAAGTGGGAGAATGCACGTCATAATTTGTGGTAGGGGGGTACGCGTTCGCGCGGCCCC
AmTr_v1.0_scaffold00071	Ensembl_Plants	snRNA	1105762	1105864	.	+	.	ID=gene:ENSRNA049455020	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTCGGAGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTT	AmTr_v1.0_scaffold00071	Ensembl_Plants	LTR	1105761	1105922	677	+	.	ID=128518	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=GTCTCTTCGGAGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTTTTTACTTTTTTCGGTAGATTTAATTATTTTGAGGCCAATTTCCTTTCTATCCCTCTTT
AmTr_v1.0_scaffold00071	Ensembl_Plants	snRNA	3442534	3442636	.	+	.	ID=gene:ENSRNA049455011	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTCAGAGACATCCGATAAAATTGGAACGATATAGAGAATATTAGCATGGCCCCTGCGCAAGGATGACATACACAAATCGAGAAATGGTCTAAATTTTT	AmTr_v1.0_scaffold00071	Ensembl_Plants	LTR	3442534	3442636	545	+	.	ID=128521	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TCTCTTCAGAGACATCCGATAAAATTGGAACGATATAGAGAATATTAGCATGGCCCCTGCGCAAGGATGACATACACAAATCGAGAAATGGTCTAAATTTTT
AmTr_v1.0_scaffold02242	Ensembl_Plants	snRNA	2172	2272	.	-	.	ID=gene:ENSRNA049461357	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTTTTTGGAGATATCCGATAAAATTGGAACGGTATAGAGAAGATTAGCATGGCCCCTGCACAAGGATGACACACAAATTGAGAGGTGGTCTAATTTTTT	AmTr_v1.0_scaffold02242	Ensembl_Plants	LTR	2171	2272	553	-	.	ID=128570	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=GTCTTTTTGGAGATATCCGATAAAATTGGAACGGTATAGAGAAGATTAGCATGGCCCCTGCACAAGGATGACACACAAATTGAGAGGTGGTCTAATTTTTT
AmTr_v1.0_scaffold02242	Ensembl_Plants	snRNA	2172	2272	.	-	.	ID=gene:ENSRNA049461357	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTTTTTGGAGATATCCGATAAAATTGGAACGGTATAGAGAAGATTAGCATGGCCCCTGCACAAGGATGACACACAAATTGAGAGGTGGTCTAATTTTTT	AmTr_v1.0_scaffold02242	Ensembl_Plants	LTR	2119	2187	233	-	.	ID=128634	repeat_name=LTR_Sb_chr_08_498	repeat_type=LTRs	sequence=GGTGGTCTAATTTTTTTAGAATGGGGCTATCTGAAACCCATTAAAAGTCTTGGCCTTCATTCTCACTT
AmTr_v1.0_scaffold02915	Ensembl_Plants	snRNA	2016	2086	.	+	.	ID=gene:ENSRNA049461123	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=TGACTTAGAGAAGATTAGCATGGTCCCTGCCAAGGATGATACGCACAAATCGAAAAATGGTCCAAATTTTT	AmTr_v1.0_scaffold02915	Ensembl_Plants	LTR	2022	2086	383	+	.	ID=128566	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=GAGAAGATTAGCATGGTCCCTGCCAAGGATGATACGCACAAATCGAAAAATGGTCCAAATTTTT
AmTr_v1.0_scaffold00101	Ensembl_Plants	snRNA	505217	505377	.	-	.	ID=gene:ENSRNA049460435	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=ATACTTACCTGGGCGGGGTCAATCGGTGAACAGAAAGGCCGATGGCCTAGGGCGGCCGCTTCCATTGCACTTGGGTGGTGGGTCACCCTAGCATCTCTCCAATGTGGGAGACTGCACGTCATAATTTGTGAAAGGGGGGTACGCGTTCGCGCGGCCCCCAC	AmTr_v1.0_scaffold00101	Ensembl_Plants	LTR	505219	505382	544	-	.	ID=128174	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=GAAGCATACTTACCTGGGCGGGGTCAATCGGTGAACAGAAAGGCCGATGGCCTAGGGCGGCCGCTTCCATTGCACTTGGGTGGTGGGTCACCCTAGCATCTCTCCAATGTGGGAGACTGCACGTCATAATTTGTGAAAGGGGGGTACGCGTTCGCGCGGCCCC
AmTr_v1.0_scaffold00155	Ensembl_Plants	snRNA	863694	863792	.	+	.	ID=gene:ENSRNA049459620	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=TCAATGCATTGATTAGCACAAAATTGGAACGATACATAAAAGATTAGCATCCACTGTGCGAGGATGACACGCCCAAATCAAGAAACTCAATGCATCGAT	AmTr_v1.0_scaffold00155	Ensembl_Plants	LTR	863714	863777	290	+	.	ID=128549	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=AATTGGAACGATACATAAAAGATTAGCATCCACTGTGCGAGGATGACACGCCCAAATCAAGAA
AmTr_v1.0_scaffold00009	Ensembl_Plants	snRNA	8407779	8407881	.	+	.	ID=gene:ENSRNA049458920	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTTTCTTCGGAGACCTCTGATGAAATTTGAACAATACAAAGAACATTAACATGACCCCTGTGCAAGGATGATACGCACAAATCGAGAAATTGTTCAAATTTTT	AmTr_v1.0_scaffold00009	Ensembl_Plants	LTR	8407777	8407881	514	+	.	ID=128520	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TGTTTCTTCGGAGACCTCTGATGAAATTTGAACAATACAAAGAACATTAACATGACCCCTGTGCAAGGATGATACGCACAAATCGAGAAATTGTTCAAATTTTT
AmTr_v1.0_scaffold00053	Ensembl_Plants	snRNA	44764	44922	.	+	.	ID=gene:ENSRNA049454400	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=TAACTTACTGGACAGAGTCTATTGGTAATCAAGAAGTTCGATGGTCTAAGGAGGCTGCCCACATTGCACTTGGACGATGGATCTCCTTAGCATTTCTCTGAGTGGGGGATGTGCATGTCATAACTTGTGGTAGGGAATTTATGTTTACCTGGCCCCTGC	AmTr_v1.0_scaffold00053	Ensembl_Plants	LTR	44766	44929	313	+	.	ID=128163	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=CTTACTGGACAGAGTCTATTGGTAATCAAGAAGTTCGATGGTCTAAGGAGGCTGCCCACATTGCACTTGGACGATGGATCTCCTTAGCATTTCTCTGAGTGGGGGATGTGCATGTCATAACTTGTGGTAGGGAATTTATGTTTACCTGGCCCCTGCCAATGTA
AmTr_v1.0_scaffold00053	Ensembl_Plants	snRNA	2072775	2072890	.	+	.	ID=gene:ENSRNA049454384	Name=U5	biotype=snRNA	description=U5 spliceosomal RNA	sequence=AGCCGTGTGGTGAGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCTCGTCACTCAAAGCGGCATACGCCTATTTTTGGAGGGCTTTTCTCTTTTGAGTTA	AmTr_v1.0_scaffold00053	Ensembl_Plants	LTR	2072772	2072876	778	+	.	ID=60544	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=GGAGCCGTGTGGTGAGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCTCGTCACTCAAAGCGGCATACGCCTATTTTTGGAGGGCTTT
AmTr_v1.0_scaffold00053	Ensembl_Plants	snRNA	2251346	2251464	.	+	.	ID=gene:ENSRNA049454362	Name=U5	biotype=snRNA	description=U5 spliceosomal RNA	sequence=AGCCGTGTGGTGAGTACAGAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCTCGTCACTCAAAGCGGCATACGCCTATTTTTGAAGGGGCTTCTCTCTCTTGAGATGA	AmTr_v1.0_scaffold00053	Ensembl_Plants	LTR	2251343	2251448	738	+	.	ID=60547	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=GGAGCCGTGTGGTGAGTACAGAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCTCGTCACTCAAAGCGGCATACGCCTATTTTTGAAGGGGCTT
AmTr_v1.0_scaffold00033	Ensembl_Plants	snRNA	2355630	2355742	.	+	.	ID=gene:ENSRNA049454289	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=TTCTGATATTGGAACGAATACAGAGACATCCAACAAAATTGGAATGATACTGAGAAGATTAGCATGCCCCTGCGTAGACACGCACAAATTTCTGAGAAATGGTCCAAATTTTT	AmTr_v1.0_scaffold00033	Ensembl_Plants	LTR	2355650	2355747	444	+	.	ID=128531	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=AGAGACATCCAACAAAATTGGAATGATACTGAGAAGATTAGCATGCCCCTGCGTAGACACGCACAAATTTCTGAGAAATGGTCCAAATTTTTTTTAA
AmTr_v1.0_scaffold00053	Ensembl_Plants	snRNA	2217117	2217231	.	+	.	ID=gene:ENSRNA049454353	Name=U5	biotype=snRNA	description=U5 spliceosomal RNA	sequence=AGCCGTGTGGTGAGCACAGAGCGAACTATTCTTTGGCCTTTTACTAAAGAATACCGTGTGCTCAGCACTCAAAGCGTCGGACGCCTATTTTTGAGGGCTTCTCTCTGTTAAGCTC	AmTr_v1.0_scaffold00053	Ensembl_Plants	LTR	2217115	2217216	595	+	.	ID=60546	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=GAGCCGTGTGGTGAGCACAGAGCGAACTATTCTTTGGCCTTTTACTAAAGAATACCGTGTGCTCAGCACTCAAAGCGTCGGACGCCTATTTTTGAGGGCTT
AmTr_v1.0_scaffold00057	Ensembl_Plants	snRNA	3262071	3262173	.	-	.	ID=gene:ENSRNA049454104	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTTTCTTCAAAGACATCCGGTAAAATTGAAAGAATGTAAAGAAGATTGGCATGGCCCCCACACAAGGATGACACATACGAATTGAGAAACAGTCCAATTTTTG	AmTr_v1.0_scaffold00057	Ensembl_Plants	LTR	3262062	3262175	484	-	.	ID=128565	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TTGTTTCTTCAAAGACATCCGGTAAAATTGAAAGAATGTAAAGAAGATTGGCATGGCCCCCACACAAGGATGACACATACGAATTGAGAAACAGTCCAATTTTTGTTTTAGGG
AmTr_v1.0_scaffold00058	Ensembl_Plants	snRNA	391882	391977	.	+	.	ID=gene:ENSRNA049453993	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=TTATTCACCACAGTAAATTGGAATGACACTGAGAAGATTAGCATGGCCCCTGCACAAGGATGACATTTACCCAGAAACAACAAGGAAAATAATTAT	AmTr_v1.0_scaffold00058	Ensembl_Plants	LTR	391895	391946	325	+	.	ID=128524	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=AAATTGGAATGACACTGAGAAGATTAGCATGGCCCCTGCACAAGGATGACA
AmTr_v1.0_scaffold00031	Ensembl_Plants	snRNA	271329	271445	.	+	.	ID=gene:ENSRNA049453915	Name=U5	biotype=snRNA	description=U5 spliceosomal RNA	sequence=AGCTGTGTGGTGAGCACAGAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGAGCTCGTCACAAATAGCGGCATACGCCTATTTTTGGCAGGGTTATCTCCTTTGAGATTA	AmTr_v1.0_scaffold00031	Ensembl_Plants	LTR	271326	271427	640	+	.	ID=60584	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=GGAGCTGTGTGGTGAGCACAGAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGAGCTCGTCACAAATAGCGGCATACGCCTATTTTTGGCAGGG
AmTr_v1.0_scaffold00013	Ensembl_Plants	snRNA	2873745	2873846	.	-	.	ID=gene:ENSRNA049453878	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GCCTCTTCGGAGACATCTAATAAAATTGGAACAATACAGAGAAGATTAGCATGGCCCCTGCCCAAGGATGACATGCACAATCGAGAAATGGTACAATTTTTT	AmTr_v1.0_scaffold00013	Ensembl_Plants	LTR	2873743	2873847	631	-	.	ID=128538	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TGCCTCTTCGGAGACATCTAATAAAATTGGAACAATACAGAGAAGATTAGCATGGCCCCTGCCCAAGGATGACATGCACAATCGAGAAATGGTACAATTTTTTT
AmTr_v1.0_scaffold00013	Ensembl_Plants	snRNA	7132361	7132461	.	+	.	ID=gene:ENSRNA049453860	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTTTCTTCGAAGACATCCGATAAAATTGGCATGATACAAAGAAGATTAGCATTGTCCCTGCACAAGGATGACACATACATCGAGAAATGGTCCAAATTTTT	AmTr_v1.0_scaffold00013	Ensembl_Plants	LTR	7132360	7132461	486	+	.	ID=128551	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=GTTTCTTCGAAGACATCCGATAAAATTGGCATGATACAAAGAAGATTAGCATTGTCCCTGCACAAGGATGACACATACATCGAGAAATGGTCCAAATTTTT
AmTr_v1.0_scaffold00013	Ensembl_Plants	snRNA	7579122	7579224	.	+	.	ID=gene:ENSRNA049453847	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTAGCATACACCCATTACAAGTGAGATTAAATACTAAAAAGAAGATTGGCATGGCCCCTGCGCAAGGATGACACACACAAATAAAAAAATGGTCCTAATTTTT	AmTr_v1.0_scaffold00013	Ensembl_Plants	LTR	7579156	7579224	363	+	.	ID=128552	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=AAAAAGAAGATTGGCATGGCCCCTGCGCAAGGATGACACACACAAATAAAAAAATGGTCCTAATTTTT
AmTr_v1.0_scaffold00001	Ensembl_Plants	snRNA	14161969	14162073	.	-	.	ID=gene:ENSRNA049453629	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=ATAGAAGCCAATATACTAATACAGGACAAGGAACGATACAGAGAAGATTAACATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGATATACTAATA	AmTr_v1.0_scaffold00001	Ensembl_Plants	LTR	14161980	14162044	361	-	.	ID=128540	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=GGAACGATACAGAGAAGATTAACATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATG
AmTr_v1.0_scaffold00068	Ensembl_Plants	snRNA	2581847	2582006	.	+	.	ID=gene:ENSRNA049453585	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=ATACTTACCTGGACGGGGTCAATCGGTGAACAGGAATCCCGATGGCCTAGGGTTGGTGCCTCCATTGCACTCAGGGGGTTGCTCACCTTAGTATCTCCTCAAGTAGGAGAGTACACGTCATAATTTGTGGTAGGGGGGTACGCGTTCGCGCGGCCCCCAT	AmTr_v1.0_scaffold00068	Ensembl_Plants	LTR	2581842	2582009	712	+	.	ID=128181	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=GAGCATACTTACCTGGACGGGGTCAATCGGTGAACAGGAATCCCGATGGCCTAGGGTTGGTGCCTCCATTGCACTCAGGGGGTTGCTCACCTTAGTATCTCCTCAAGTAGGAGAGTACACGTCATAATTTGTGGTAGGGGGGTACGCGTTCGCGCGGCCCCCATCAA
AmTr_v1.0_scaffold00067	Ensembl_Plants	snRNA	1070333	1070466	.	+	.	ID=gene:ENSRNA049453542	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=ATGCTTACCTGAACGGGTGGCCTATGGTGGCTCCCCTCATTGCACTTGGAGGGTGGGTCTCCTTAGCATCTGCCCAAGTGGGAGAATGCACGTCATAATTTGTGGTAGGGGGCACGCGTTCGCGCGTCCCCTAC	AmTr_v1.0_scaffold00067	Ensembl_Plants	LTR	1070350	1070464	314	+	.	ID=128175	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=GGCCTATGGTGGCTCCCCTCATTGCACTTGGAGGGTGGGTCTCCTTAGCATCTGCCCAAGTGGGAGAATGCACGTCATAATTTGTGGTAGGGGGCACGCGTTCGCGCGTCCCCT
AmTr_v1.0_scaffold00066	Ensembl_Plants	snRNA	2229644	2229744	.	+	.	ID=gene:ENSRNA049453527	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTCGGAGATATCCGATAAAATTGGAACGATATAGAGAAGATTAGCATGGCCCCTGTGAGGATGACATGCACAAATAAAGAAATGGTCCAAATTTTA	AmTr_v1.0_scaffold00066	Ensembl_Plants	LTR	2229644	2229743	493	+	.	ID=128534	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TCTCTTCGGAGATATCCGATAAAATTGGAACGATATAGAGAAGATTAGCATGGCCCCTGTGAGGATGACATGCACAAATAAAGAAATGGTCCAAATTTT
AmTr_v1.0_scaffold00108	Ensembl_Plants	snRNA	1236476	1236578	.	-	.	ID=gene:ENSRNA049453383	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GATTGCAGACATCCGATAAGATTGGAACGATACCGCGAAGATTAGCATGGCCCCTACGCAAGGATGACTGACACGCACAAAGCGAGAAATAGTCCAAATTTTT	AmTr_v1.0_scaffold00108	Ensembl_Plants	LTR	1236474	1236576	399	-	.	ID=128542	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TTGCAGACATCCGATAAGATTGGAACGATACCGCGAAGATTAGCATGGCCCCTACGCAAGGATGACTGACACGCACAAAGCGAGAAATAGTCCAAATTTTTT
AmTr_v1.0_scaffold00108	Ensembl_Plants	snRNA	1225735	1225835	.	-	.	ID=gene:ENSRNA049453376	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=TTCTCTCTTTAGAGACATCTGATAAAATTGGAACGATACAGAGAAGATTAGCTACACGCACAACTCAAGAAATGGTCTTTTTAGAGATTCAAATAATCATA	AmTr_v1.0_scaffold00108	Ensembl_Plants	LTR	1225694	1225835	262	-	.	ID=128541	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TTCTCTCTTTAGAGACATCTGATAAAATTGGAACGATACAGAGAAGATTAGCTACACGCACAACTCAAGAAATGGTCTTTTTAGAGATTCAAATAATCATACTTTCTGTATTTTTTATTTTATTTTATAAAACTATCTTTT
AmTr_v1.0_scaffold00108	Ensembl_Plants	snRNA	1236595	1236693	.	-	.	ID=gene:ENSRNA049453373	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=CCGATAAGATTGGAACGATACCGCGAAGATTGGAACGATACCGCGAAGATTACCATGGCCCCTACGCAAGGATGACTGACACGCACAAAGCATAAGATT	AmTr_v1.0_scaffold00108	Ensembl_Plants	LTR	1236606	1236667	240	-	.	ID=128543	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=AGATTGGAACGATACCGCGAAGATTACCATGGCCCCTACGCAAGGATGACTGACACGCACA
AmTr_v1.0_scaffold00049	Ensembl_Plants	snRNA	2970917	2971113	.	+	.	ID=gene:ENSRNA049453271	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTGGTCCATCGGACCACACGATATTAAATTAATTTTTCAGTGGGGGAAGGGCCACCGCACTAGCTTGCTAGTCGGTCCTTCGGGCGTCGCCCATGCGTTGCACTACTGCACGGGCATGGCGCACCCCTA	AmTr_v1.0_scaffold00049	Ensembl_Plants	LTR	2970922	2970988	266	+	.	ID=60554	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=TTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTGG
AmTr_v1.0_scaffold00049	Ensembl_Plants	snRNA	2434424	2434620	.	-	.	ID=gene:ENSRNA049453251	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTGGTCCATCGGACCACACGATATTAAATTAATTTTTCAGTGGGGGAGGGGCTACCACACTAGCTTGCTAGTCGGTCCCTTGAGCGTCGCCTGTGTGTTGCACTACTGCACGGGCCGTGCGCACCCCTA	AmTr_v1.0_scaffold00049	Ensembl_Plants	LTR	2434549	2434615	266	-	.	ID=60552	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=TTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTG
AmTr_v1.0_scaffold00049	Ensembl_Plants	snRNA	2074533	2074729	.	+	.	ID=gene:ENSRNA049453240	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTGGTCCATAGGATCACACGATATTAAATTAATTTTTCAGTGGGGAAGGGGCTACCACACTAGCTCGCTAGTCGGTCCCTTGAGCGTCGTTCATGCGTTGCACTACTGCACGGGCCTGGCGCACCCCTA	AmTr_v1.0_scaffold00049	Ensembl_Plants	LTR	2074538	2074604	266	+	.	ID=60550	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=TTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTGG
AmTr_v1.0_scaffold00049	Ensembl_Plants	snRNA	2429943	2430139	.	-	.	ID=gene:ENSRNA049453234	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTGGTCCATCGGACCACACGATATTAAATTAATTTTTCAGTGGGGTAGGGGCTACCACACTAGCTTGCTAGTCGGTCCCTTGAGAGTCGCTTGTGCGTTGCACTACTGCACAGGCCTGGCGCACCCCTA	AmTr_v1.0_scaffold00049	Ensembl_Plants	LTR	2430068	2430134	266	-	.	ID=60551	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=TTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTG
AmTr_v1.0_scaffold00049	Ensembl_Plants	snRNA	2066831	2067027	.	+	.	ID=gene:ENSRNA049453219	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTGGTCCATAGGATCACACGATATTAAATTAATTTTTCAGTGGGGAAAGGGCTACCACACTAGCTCGCTAGTCGGTCCCTTGAGCGCCGTCCATGCGTTGCACTACTGCACGGGCCTGGCGCACCCCTA	AmTr_v1.0_scaffold00049	Ensembl_Plants	LTR	2066836	2066902	266	+	.	ID=60549	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=TTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTGG
AmTr_v1.0_scaffold03396	Ensembl_Plants	rRNA	2057	2212	.	-	.	ID=gene:ENSRNA049461012	Name=5_8S_rRNA	biotype=rRNA	description=5.8S ribosomal RNA	sequence=GACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCACTAGGCCGAGGGCACGTCTGCCTGGGCGTCA	AmTr_v1.0_scaffold03396	Ensembl_Plants	LTR	1	2324	15360	-	.	ID=123542	repeat_name=LTR_Al_scaffold_0003_561	repeat_type=LTRs	sequence=AACCCCGGCGCAATCTGCGCCAAGGAACAATAAAAGATTATCGCGTGGCTCGTGCGGTGGCCCGGAGACGGTGTCCGCCAATCGAGATGCGTGTTTATCGAAATGTCTAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCACTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACGCCGTTGCCCCCATGTGCACTGCCAAAAGCGTGTTCAGGAGGGGCGGAGACTGGCTTCCCATGAGCATTGCCTTGTGGTTGGCCTAAATTCGAGTCGTCGGCCGCAATCGCCTCGACATTCGGTGGTTTTCGATTATATCGGTGCCCCGTCGTGCGCGAATCCGTGACCGACTAGACCCGTACGACCCCAATGTGCTGCGAACGCAGTGCCTTCAACGCGACCCCAGGTCAGGCGGGATCACCCGCTGAATTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGGTTGAGAATCGGACGCCCACGGCGTTCGAATTGTAGTCTGAAGAAGCGTCCTCAGCGGCGGACCGGGCCCAAGTCCCCTGGAAAGGGGCGCCGGAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCGGCGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGCTAAATACGGGCGAGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCGGATGGGGGCCGGCGATGCGCTCCGGTCGGATGCGGAACGGTGAGAGCCGGTCTGCCGATCGACTCGGAGCGCGGACCGATGCGGATTGGGGGGGCGGCCCAAGCCCGGGCTGTTGATATGCCCGTGGAGATGTCGTCCCCTCGATTGTGGAACACAGCGCGCGCCGTCTCGGCGTGCTTCGGCATCTGCGCGCTCCAGGCATCGGCCTGCGGGCTCCCCATTCGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCTAGTAAACCCGTAAGGCGCAAGGAAGCTGACTGGCGGGATCCCCTTGTGGGTTGCACCGCCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGAGAGCATGCCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCATCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCTCGTAAACGAGTTCTATCAGGTAAAGCCAATGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGGGCGGCTGCTTTGTTGAGCCGCTCCACGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCCAACTGCGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTGAAGCGCGCGACCTACACCCGGCCGTCGGGGCAAGTACTAGGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTAGGGCGTGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGAGACGGGGGAAACCCGTCTGATAGCGCTGCGAGCGCGAGCTTCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGCGGCTGACGGCAACGTTAGGGAGTCCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCTCTCACGCC
AmTr_v1.0_scaffold04769	Ensembl_Plants	rRNA	983	1109	.	+	.	ID=gene:ENSRNA049460658	Name=SSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic small subunit ribosomal RNA	sequence=AAGTTTGGAGGCTTGAAGACGATCAGATACTGTCTTAGTCTCAACCATAAACGATGACGACCTGGGATCGGCGGATGTTGCTCTTAGGACTCCGTTGGCACCTTATGCGAAATCAAAGCCTTTGGAT	AmTr_v1.0_scaffold04769	Ensembl_Plants	LTR/Copia	980	1115	964	+	.	ID=146780	repeat_name=RLC_Gk_DX402782.1_7369	repeat_type=LTRs	sequence=CCAAGTTTGGAGGCTTGAAGACGATCAGATACTGTCTTAGTCTCAACCATAAACGATGACGACCTGGGATCGGCGGATGTTGCTCTTAGGACTCCGTTGGCACCTTATGCGAAATCAAAGCCTTTGGATTCCAAG
AmTr_v1.0_scaffold00102	Ensembl_Plants	rRNA	1711906	1712002	.	-	.	ID=gene:ENSRNA049459952	Name=SSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic small subunit ribosomal RNA	sequence=AGTACGGTAGGGGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCACTCTGCTGGGCCGACACT	AmTr_v1.0_scaffold00102	Ensembl_Plants	LTR	1711841	1712051	1814	-	.	ID=55872	repeat_name=LTR_Al_scaffold_0002_336	repeat_type=LTRs	sequence=CAAAGCTCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCCAGCCATAA
AmTr_v1.0_scaffold00191	Ensembl_Plants	rRNA	318419	318778	.	+	.	ID=gene:ENSRNA049459401	Name=LSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic large subunit ribosomal RNA	sequence=TTACTCAAAAGGGGAAGTGCTTGTATCTGCTGGCAAGACCTTCTGAGAGCATTCCTTTGATGAGCAGAACTGGCGATGTGGGATGAACCAGAAGCCAGGTTACGGTGCCGAACTGCGCGTTAACCCAGAACAAAGGGTGTTGGCCGATTAAGACAGTAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTTCCGAATCAACTAGCCCAAAAAATGGATGGCGCTGAAGCGCGAGACCCACACCCGGCCGTCAGCACTATTGCCAAGCCTCGATGAGTAGGAGGGTGCGATGGTTGCTGTGAAACCTGGGGCACGAGCCCGAGCGAAGCGGCCATTAGTG	AmTr_v1.0_scaffold00191	Ensembl_Plants	LTR/Gypsy	318474	320747	14837	+	.	ID=123529	repeat_name=LTR_Al_scaffold_0003_560	repeat_type=LTRs	sequence=TTGATGAGCAGAACTGGCGATGTGGGATGAACCAGAAGCCAGGTTACGGTGCCGAACTGCGCGTTAACCCAGAACAAAGGGTGTTGGCCGATTAAGACAGTAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTTCCGAATCAACTAGCCCAAAAAATGGATGGCGCTGAAGCGCGAGACCCACACCCGGCCGTCAGCACTATTGCCAAGCCTCGATGAGTAGGAGGGTGCGATGGTTGCTGTGAAACCTGGGGCACGAGCCCGAGCGAAGCGGCCATTAGTGCAGATCTTGGTGATAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGTGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTTGATCTTAAGAGTGGGGAGTAGCCTGTCCGAGAGCGCTGCTAGCGCAAGCTTCGAAAGGGAATCTGGTTAAAATTCCTGAACCGGGACGTGGCGGTGGACGACAACGTTAGGGAGTCCGGAGACGTCTTCGGGGGCCTCGGGAAGAGTTATCTCTTCTGTTTAACAGCCTGCCCACCCTGGAAACAGCTCAGCTGGAGGTAGGGTCCAACGGCTGGAAGAGCACCGCACGTCCAGTGGTGTTCGATGTGCCCCCGATGGCTCGTGAAAATCCAGAGGAGAGAGTGCCGCCCACGCCCGATCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAACCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACTTAGGGAAAAGGATTGGCTCTGAGGGCTGGGCCCGAGGGTCCCCGCCCTGAACCCGTCGGCTGTCGGCGGACTGCTCGAGCTGCTCCTGCGGTGAGAGCAGGTCATCGCTTGCAGGCCGGGGGATAGACGGGGAACGGCCCCCCTGGGGGCCTTTCCCGAGCATCGAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCAATGCGATGGTCCCTGCGGATGTTGACGCAATGTGATTTCTGCCCAGTGCTCTGCATGTCAAAGTGAAGAAATTCAACCAAGTGCGGGTAAACGACGGGAGTAACTCTGACTCTCTTAAGGTAGGCAAATGCCTCGTCATCTAATTAGTGATGCACATGATTGGATTAACGAGATTCCCATTGTCCCTATCTACTATCCAGCGAAACCACAACCAAGGGAACGGTCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCGCCCCCGGTGGAGCAAGTGAAATAACACTACTTTTAACGTTATTTTACTTATTCCGTGAGTCGGTGGCAGGGCATTGCCCCTCGTTTTGGCTCCAAGGCTAGTCCTAGGCGGGCTGATCCGAGCGGAAGACATTGTCAGGTTGGGAGTTTGGCTAGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGGTCAACGAGATTAGAAATCTCGTGTGGAACAAAAGGGTAAAAGTTCGTTGGATTCTGATTTTGAGTACGAATACAAACCGTGAAAGCGTGGCCAATCGATCCTTTAGACCTTTGGGATTTGAAGTTAGATGTGTCCGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCAATGTCGGCTCTACCTCCTCTTCTTTCTTTAATTCGCCAAGTGTTGGATTGTTCACCCACTAATAGGGAACGTAAGCTGGGATTAGACCATCATGTGACAGGTTAGTTTTACCCTACAGATGAGCGTGCTGCGATAGTAATTCAACTTAGTACGAGAGGAACCATTGATTCAAACAAATGGTCATCGCACTTGGTTGAAAAGCTAGTGGCGCGAAGCTACCGTGTGCCGGATTATGACTGAAAGCCTCTAAGTCAGAATCCAAGCTAGGAAGCGGTGCCTGTCCCCTCTGCCCGTTTGCCGACCCACAGTAGGGTTGCGCTCGCACACGCCAGGGGCTCGTGTCGTTGGTGAAGGCCACCACAGTGGATGCACTGTGGGGGATTTCCTTGCAATGTAATACCCGTTGGGCGGTAGGCAGAATCCTTTGCAGACGACTTAAATATGCGACGGGATAATGTAAGTGGCAGAGTGGCCTTGCTGTCACGATCCACTGAGATTCAGCCCTGTGTCGTAACGATTCGTCCCCCCC
AmTr_v1.0_scaffold00191	Ensembl_Plants	rRNA	343173	343589	.	+	.	ID=gene:ENSRNA049459394	Name=LSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic large subunit ribosomal RNA	sequence=CGTACTGAGTTAAAGCATATCAATAAGCGAAGGAAAAGAAACTTACCAGGATTCCCCTAGTAACGACGAGCGAACCAGAACTGCCCAGCATGGGAATCAGGCGGCCCCGCTGCTCGAATTGTAGTCTGTAGAAGCGTCCTCAGCGACGGATTGGGCACAAGTCCCCTGGAAGCAGGCGCCAGAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTACCGCACCACGAGGCACTGTAGGCAAGTAGGGTTGTTTGGGAATGCATCCCTAATTGGGCTGTAAATTCCGTCCAAGGCTAAATACTGGCGAGAGACAGATAACGAACAAGTACCGCTTGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTTTTGGGAGGGAAGCGGTTGGGGGTTGGCAAGCAC	AmTr_v1.0_scaffold00191	Ensembl_Plants	MobileElement	343169	343585	2774	+	.	ID=123520	repeat_name=TXX_Gr_DX403825.1_7641	repeat_type=Unknown	sequence=TTCCGTACTGAGTTAAAGCATATCAATAAGCGAAGGAAAAGAAACTTACCAGGATTCCCCTAGTAACGACGAGCGAACCAGAACTGCCCAGCATGGGAATCAGGCGGCCCCGCTGCTCGAATTGTAGTCTGTAGAAGCGTCCTCAGCGACGGATTGGGCACAAGTCCCCTGGAAGCAGGCGCCAGAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTACCGCACCACGAGGCACTGTAGGCAAGTAGGGTTGTTTGGGAATGCATCCCTAATTGGGCTGTAAATTCCGTCCAAGGCTAAATACTGGCGAGAGACAGATAACGAACAAGTACCGCTTGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTTTTGGGAGGGAAGCGGTTGGGGGTTGGCAA
AmTr_v1.0_scaffold00191	Ensembl_Plants	rRNA	319220	320738	.	+	.	ID=gene:ENSRNA049459367	Name=LSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic large subunit ribosomal RNA	sequence=GATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACTTAGGGAAAAGGATTGGCTCTGAGGGCTGGGCCCGAGGGTCCCCGCCCTGAACCCGTCGGCTGTCGGCGGACTGCTCGAGCTGCTCCTGCGGTGAGAGCAGGTCATCGCTTGCAGGCCGGGGGATAGACGGGGAACGGCCCCCCTGGGGGCCTTTCCCGAGCATCGAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCAATGCGATGGTCCCTGCGGATGTTGACGCAATGTGATTTCTGCCCAGTGCTCTGCATGTCAAAGTGAAGAAATTCAACCAAGTGCGGGTAAACGACGGGAGTAACTCTGACTCTCTTAAGGTAGGCAAATGCCTCGTCATCTAATTAGTGATGCACATGATTGGATTAACGAGATTCCCATTGTCCCTATCTACTATCCAGCGAAACCACAACCAAGGGAACGGTCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCGCCCCCGGTGGAGCAAGTGAAATAACACTACTTTTAACGTTATTTTACTTATTCCGTGAGTCGGTGGCAGGGCATTGCCCCTCGTTTTGGCTCCAAGGCTAGTCCTAGGCGGGCTGATCCGAGCGGAAGACATTGTCAGGTTGGGAGTTTGGCTAGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGGTCAACGAGATTAGAAATCTCGTGTGGAACAAAAGGGTAAAAGTTCGTTGGATTCTGATTTTGAGTACGAATACAAACCGTGAAAGCGTGGCCAATCGATCCTTTAGACCTTTGGGATTTGAAGTTAGATGTGTCCGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCAATGTCGGCTCTACCTCCTCTTCTTTCTTTAATTCGCCAAGTGTTGGATTGTTCACCCACTAATAGGGAACGTAAGCTGGGATTAGACCATCATGTGACAGGTTAGTTTTACCCTACAGATGAGCGTGCTGCGATAGTAATTCAACTTAGTACGAGAGGAACCATTGATTCAAACAAATGGTCATCGCACTTGGTTGAAAAGCTAGTGGCGCGAAGCTACCGTGTGCCGGATTATGACTGAAAGCCTCTAAGTCAGAATCCAAGCTAGGAAGCGGTGCCTGTCCCCTCTGCCCGTTTGCCGACCCACAGTAGGGTTGCGCTCGCACACGCCAGGGGCTCGTGTCGTTGGTGAAGGCCACCACAGTGGATGCACTGTGGGGGATTTCCTTGCAATGTAATACCCGTTGGGCGGTAGGCAGAATCCTTTGCAGACGACTTAAATATGCGACGGGATAATGTAAGTGGCAGAGTGGCCTTGCTGTCACGATCCACTGAGATTCAGCCCTGTGTCGTAACGATTC	AmTr_v1.0_scaffold00191	Ensembl_Plants	LTR/Gypsy	318474	320747	14837	+	.	ID=123529	repeat_name=LTR_Al_scaffold_0003_560	repeat_type=LTRs	sequence=TTGATGAGCAGAACTGGCGATGTGGGATGAACCAGAAGCCAGGTTACGGTGCCGAACTGCGCGTTAACCCAGAACAAAGGGTGTTGGCCGATTAAGACAGTAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTTCCGAATCAACTAGCCCAAAAAATGGATGGCGCTGAAGCGCGAGACCCACACCCGGCCGTCAGCACTATTGCCAAGCCTCGATGAGTAGGAGGGTGCGATGGTTGCTGTGAAACCTGGGGCACGAGCCCGAGCGAAGCGGCCATTAGTGCAGATCTTGGTGATAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGTGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTTGATCTTAAGAGTGGGGAGTAGCCTGTCCGAGAGCGCTGCTAGCGCAAGCTTCGAAAGGGAATCTGGTTAAAATTCCTGAACCGGGACGTGGCGGTGGACGACAACGTTAGGGAGTCCGGAGACGTCTTCGGGGGCCTCGGGAAGAGTTATCTCTTCTGTTTAACAGCCTGCCCACCCTGGAAACAGCTCAGCTGGAGGTAGGGTCCAACGGCTGGAAGAGCACCGCACGTCCAGTGGTGTTCGATGTGCCCCCGATGGCTCGTGAAAATCCAGAGGAGAGAGTGCCGCCCACGCCCGATCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAACCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACTTAGGGAAAAGGATTGGCTCTGAGGGCTGGGCCCGAGGGTCCCCGCCCTGAACCCGTCGGCTGTCGGCGGACTGCTCGAGCTGCTCCTGCGGTGAGAGCAGGTCATCGCTTGCAGGCCGGGGGATAGACGGGGAACGGCCCCCCTGGGGGCCTTTCCCGAGCATCGAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCAATGCGATGGTCCCTGCGGATGTTGACGCAATGTGATTTCTGCCCAGTGCTCTGCATGTCAAAGTGAAGAAATTCAACCAAGTGCGGGTAAACGACGGGAGTAACTCTGACTCTCTTAAGGTAGGCAAATGCCTCGTCATCTAATTAGTGATGCACATGATTGGATTAACGAGATTCCCATTGTCCCTATCTACTATCCAGCGAAACCACAACCAAGGGAACGGTCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCGCCCCCGGTGGAGCAAGTGAAATAACACTACTTTTAACGTTATTTTACTTATTCCGTGAGTCGGTGGCAGGGCATTGCCCCTCGTTTTGGCTCCAAGGCTAGTCCTAGGCGGGCTGATCCGAGCGGAAGACATTGTCAGGTTGGGAGTTTGGCTAGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGGTCAACGAGATTAGAAATCTCGTGTGGAACAAAAGGGTAAAAGTTCGTTGGATTCTGATTTTGAGTACGAATACAAACCGTGAAAGCGTGGCCAATCGATCCTTTAGACCTTTGGGATTTGAAGTTAGATGTGTCCGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCAATGTCGGCTCTACCTCCTCTTCTTTCTTTAATTCGCCAAGTGTTGGATTGTTCACCCACTAATAGGGAACGTAAGCTGGGATTAGACCATCATGTGACAGGTTAGTTTTACCCTACAGATGAGCGTGCTGCGATAGTAATTCAACTTAGTACGAGAGGAACCATTGATTCAAACAAATGGTCATCGCACTTGGTTGAAAAGCTAGTGGCGCGAAGCTACCGTGTGCCGGATTATGACTGAAAGCCTCTAAGTCAGAATCCAAGCTAGGAAGCGGTGCCTGTCCCCTCTGCCCGTTTGCCGACCCACAGTAGGGTTGCGCTCGCACACGCCAGGGGCTCGTGTCGTTGGTGAAGGCCACCACAGTGGATGCACTGTGGGGGATTTCCTTGCAATGTAATACCCGTTGGGCGGTAGGCAGAATCCTTTGCAGACGACTTAAATATGCGACGGGATAATGTAAGTGGCAGAGTGGCCTTGCTGTCACGATCCACTGAGATTCAGCCCTGTGTCGTAACGATTCGTCCCCCCC
AmTr_v1.0_scaffold00073	Ensembl_Plants	rRNA	3416899	3418398	.	+	.	ID=gene:ENSRNA049459213	Name=LSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic large subunit ribosomal RNA	sequence=GATGGAACAATGTAGGCAAGGCAAGTCGAAAAAATGGATCCATAACTTTGGGAAAAGGATTGGCTCGGAGGGCTGGGCCCGGGGGTGTCGGCAGATTGTTCAAGCTGCTCCCGCAGTGAGAGTGGGTCACCTCGTGTCAGCCGGGGGACAGACAGGGAACGGCCCCCCTGGGGGCCTTCCCTAAGCATCAAACAGACGTCTCATAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAATAAAGCATTGCGATGGTCCCAACGGATGTTGACACAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCTAACGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTTGTCATCTAATTAGTGACGCACATGAATGGATTAACGAGATTCCCACTATCCCTATCTACTATCCAGCAAAACCACAGCCAAGGGAATGGGCTTGGAAGAATCAATGGGGAAAGAAGACCCTGTTGAGATTAACTCTAGTCCGACTTTGTGAAATGACTCGAGAGGTATAGGATAAGTGGGAGCCGCCCCCTGTGGTGCAAGTGAAATACCACTACTTTTAAAATTATTTTACTTATTCCGTGAGTCGGAGGCGGGGCATTGCCCCTCGTTTTAGCTCCAAGGCTTGCTTTAGGCGAGCCCATTCGGGCAGAAGACATTGTCAGGTGGGGAGTTTGGCTAGGGCGGCACATCTGTTAAAAGATAACACAAGTGTCCTAAGATGAGCTCAACGAGAACAAAAATCTCATGTGGAACAAAAGGGTAAAAGCTCGTTTCACTCTGATTTTAAGTACGAATACGAACCATGAAAGCGTGGCCGCCTATCAATCCTCTAGACCTTCAGGATTTGAAGCTAGAGGTGCCAAAAAAGTTACCACATCGATAACTGGCTTGTGGCAACCAAGCGTTCGCAGCAACATTGCTTTTGATCCTTTGATGTTGGCTCTTCCTATCATTGTGAAGCAGAATTCGTCAAGTGTTGGATTGTTCACCCACCAATAGGAAACATGAGCTAGGTTTAGACCATCTTGAGATAGGTTAGTTTTACCCTACTGATGAGAGTTCCACAATAGTAATTCAACTTGGTACGAGAGGAACCATTGATTCACACAAATGGTCATCGTGCTTGGTTGAAAAGCCAGTGGTGCGAAGCTACCGTGTGCGGAATTAAGACTGAACGCCTCTAAGTCAGAATCCAAGCTAGAAAGTGGAGCCTGTATCCTCCGCCCGTTTGCCGACCCACAAGAGGGCTGCACTCGTGCACCCCAGGGGCTCGAGTCGTTTGTGAAACCTTCCATAGCAGATGCTCTGCGGGGGACTGCCTTGCAATGCAATTCCCTTCGGCCGGTAGGCAGAATCCTTTACAGATGACTTAAATACGAGACGGGGTATTGTAAGTGACAGAGTGGCTTTACTGCCACGATCCACTGAGATTCAGCCCTGTGTCGCAACGATTC	AmTr_v1.0_scaffold00073	Ensembl_Plants	LTR	3416874	3418425	9942	+	.	ID=10531	repeat_name=LTR_Al_scaffold_0183_279	repeat_type=LTRs	sequence=CTCTAAGGTGAACAGCCTCTAGTCGATGGAACAATGTAGGCAAGGCAAGTCGAAAAAATGGATCCATAACTTTGGGAAAAGGATTGGCTCGGAGGGCTGGGCCCGGGGGTGTCGGCAGATTGTTCAAGCTGCTCCCGCAGTGAGAGTGGGTCACCTCGTGTCAGCCGGGGGACAGACAGGGAACGGCCCCCCTGGGGGCCTTCCCTAAGCATCAAACAGACGTCTCATAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAATAAAGCATTGCGATGGTCCCAACGGATGTTGACACAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCTAACGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTTGTCATCTAATTAGTGACGCACATGAATGGATTAACGAGATTCCCACTATCCCTATCTACTATCCAGCAAAACCACAGCCAAGGGAATGGGCTTGGAAGAATCAATGGGGAAAGAAGACCCTGTTGAGATTAACTCTAGTCCGACTTTGTGAAATGACTCGAGAGGTATAGGATAAGTGGGAGCCGCCCCCTGTGGTGCAAGTGAAATACCACTACTTTTAAAATTATTTTACTTATTCCGTGAGTCGGAGGCGGGGCATTGCCCCTCGTTTTAGCTCCAAGGCTTGCTTTAGGCGAGCCCATTCGGGCAGAAGACATTGTCAGGTGGGGAGTTTGGCTAGGGCGGCACATCTGTTAAAAGATAACACAAGTGTCCTAAGATGAGCTCAACGAGAACAAAAATCTCATGTGGAACAAAAGGGTAAAAGCTCGTTTCACTCTGATTTTAAGTACGAATACGAACCATGAAAGCGTGGCCGCCTATCAATCCTCTAGACCTTCAGGATTTGAAGCTAGAGGTGCCAAAAAAGTTACCACATCGATAACTGGCTTGTGGCAACCAAGCGTTCGCAGCAACATTGCTTTTGATCCTTTGATGTTGGCTCTTCCTATCATTGTGAAGCAGAATTCGTCAAGTGTTGGATTGTTCACCCACCAATAGGAAACATGAGCTAGGTTTAGACCATCTTGAGATAGGTTAGTTTTACCCTACTGATGAGAGTTCCACAATAGTAATTCAACTTGGTACGAGAGGAACCATTGATTCACACAAATGGTCATCGTGCTTGGTTGAAAAGCCAGTGGTGCGAAGCTACCGTGTGCGGAATTAAGACTGAACGCCTCTAAGTCAGAATCCAAGCTAGAAAGTGGAGCCTGTATCCTCCGCCCGTTTGCCGACCCACAAGAGGGCTGCACTCGTGCACCCCAGGGGCTCGAGTCGTTTGTGAAACCTTCCATAGCAGATGCTCTGCGGGGGACTGCCTTGCAATGCAATTCCCTTCGGCCGGTAGGCAGAATCCTTTACAGATGACTTAAATACGAGACGGGGTATTGTAAGTGACAGAGTGGCTTTACTGCCACGATCCACTGAGATTCAGCCCTGTGTCGCAACGATTCGTCCCCCCCTCCCCACACCCCCCCAAA
AmTr_v1.0_scaffold00073	Ensembl_Plants	rRNA	3407202	3409240	.	-	.	ID=gene:ENSRNA049459173	Name=LSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic large subunit ribosomal RNA	sequence=CGACCCCAGGTCAGGCGGGGCCACCCACTGAGTTTAAGCATATCAATAAGCAGAGGAAAAGAAACTTACCAGAATTCCCTTAGTAAAGGCAAGCGAACCGAGAACTGCCCAGCATGGGAATCGGGCGACCCCACTGCCGGAATTGTAGTCCGTAGAAGCGTCCTCAGCGGCAAACTGGGTTAGTCAATCCTAAGAGTCGGGGGAAGCCCGTCCGAGAGCGCTGCTACAGCGAGCTTCGAAAGGGAATTGGGTTAAAATTCCTGAACTGGGACGTGGCGGCAGACGGCAACCTTAGGGAGTCCGGAGACGTCGGGGTCCTCGGGAAGATTTATCTTTTCTATTTAACAGCCTTCCCACCCTGGAAACAGCTCAGTCGGAGGTAGGGTCCAACGGCTGGAAGAGTACCACAAATCGTGTGGTGTCCGGTGCACCCCCGGTGGCCCGTGAAAATCCGGAGGACCGAGTACCGCTCACACCCGCTCGTAATCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTTGATGGAACAATGTAGGCAAGGCAAGTCGGTAAAATGGATCCGTAACTTCAAGAAAAGGATTGGCTCAGAGGGTTGGGCTTGGGGGTCCCCGCCCTGAACCCATCGGCTATCGATAGACTGCTCGAGCTGCTCCCACGGTGAGAGCAGGTCACCGTGTGCTAGTCGGGGGACAGACGAGGAACGACCCCCCTGGGGGCCTTCCCTGGGCATTGAACAGCCGAATTAAAACTGGTACTAACAAATGGAATCCAACTATTTAATTAAACCAAAGCATTGTGATGATCCCTGCGGATGTTGCCGCAATGTGATTTCTGCCCAGTGCTATCAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACAGCGCGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCATCATCTAATTAGTGACGCGCATGAATGGATTAATGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGCGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCGCCCCCGGTGGCACAAGTGAAATACCACTACTTTTAATGTTATTTTATTTATTCCGTGAGTTGGAGGCGGGGCATTGCCCCCTCGTTTTGGCTCCAAGGCTCACTCTAGGCTGGCCGATCCGGGCAGAAGACATTGTCAGGTGGGAAGTTTGGCTGGGGGGCACATCTATTAAAAGATAACGTAGGTGTCCTAAGATGAGCTCAACGAGAACAGAATCTCGTGTGGAACAAAAGGGTAAAAGCTCATTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGACCTTCTGGATTTGAAGCTAGAGGTGTCAGAAAAGTTACCATAGGGATAACTGGCTTGTGGCAGCCATGTGTTTATAGCGACGTTGCTTTTTTATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCGCCAAGTGTTGGATTGTTCACCCATCAATAGAGAACGGGAGCTGGGTTTAGACCATCATGAGAAAGGTTAGTTTTACCCTACTAATGAGCATGCTACGATAGTAATTCAACTTAGTACGAGGGGAACTGTTAATTCACACAAATGATCATCATGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCATGTCTCGGATTATGACTGAATGCCTCTTAGTCAGAATTCAAGCTAGGAAGCGGCACCTATCCCCTGCACCCGTTTGTCGACCCACAGTAGGGCTGCACTCGCGGGCTCGTGTCGTTGGTGAAGCCCCCCACAGTGGATGCTCTTTGGGGGACTGCCTCTTAATGCAATTCCCGTCGGGAGGTTGGCAAAATCCTTTGTAGACGACTTAAATACGTGACGGGGTATTGTAAGTGGCAGAGTGGCCTTGCTACCACGATCCACTGACATTCAGCCCTGTGTCGCAACAAATCAT	AmTr_v1.0_scaffold00073	Ensembl_Plants	LTR/Gypsy	3407193	3409065	12582	-	.	ID=123523	repeat_name=LTR_Al_scaffold_0003_560	repeat_type=LTRs	sequence=TGGGTTAGTCAATCCTAAGAGTCGGGGGAAGCCCGTCCGAGAGCGCTGCTACAGCGAGCTTCGAAAGGGAATTGGGTTAAAATTCCTGAACTGGGACGTGGCGGCAGACGGCAACCTTAGGGAGTCCGGAGACGTCGGGGTCCTCGGGAAGATTTATCTTTTCTATTTAACAGCCTTCCCACCCTGGAAACAGCTCAGTCGGAGGTAGGGTCCAACGGCTGGAAGAGTACCACAAATCGTGTGGTGTCCGGTGCACCCCCGGTGGCCCGTGAAAATCCGGAGGACCGAGTACCGCTCACACCCGCTCGTAATCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTTGATGGAACAATGTAGGCAAGGCAAGTCGGTAAAATGGATCCGTAACTTCAAGAAAAGGATTGGCTCAGAGGGTTGGGCTTGGGGGTCCCCGCCCTGAACCCATCGGCTATCGATAGACTGCTCGAGCTGCTCCCACGGTGAGAGCAGGTCACCGTGTGCTAGTCGGGGGACAGACGAGGAACGACCCCCCTGGGGGCCTTCCCTGGGCATTGAACAGCCGAATTAAAACTGGTACTAACAAATGGAATCCAACTATTTAATTAAACCAAAGCATTGTGATGATCCCTGCGGATGTTGCCGCAATGTGATTTCTGCCCAGTGCTATCAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACAGCGCGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCATCATCTAATTAGTGACGCGCATGAATGGATTAATGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGCGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCGCCCCCGGTGGCACAAGTGAAATACCACTACTTTTAATGTTATTTTATTTATTCCGTGAGTTGGAGGCGGGGCATTGCCCCCTCGTTTTGGCTCCAAGGCTCACTCTAGGCTGGCCGATCCGGGCAGAAGACATTGTCAGGTGGGAAGTTTGGCTGGGGGGCACATCTATTAAAAGATAACGTAGGTGTCCTAAGATGAGCTCAACGAGAACAGAATCTCGTGTGGAACAAAAGGGTAAAAGCTCATTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGACCTTCTGGATTTGAAGCTAGAGGTGTCAGAAAAGTTACCATAGGGATAACTGGCTTGTGGCAGCCATGTGTTTATAGCGACGTTGCTTTTTTATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCGCCAAGTGTTGGATTGTTCACCCATCAATAGAGAACGGGAGCTGGGTTTAGACCATCATGAGAAAGGTTAGTTTTACCCTACTAATGAGCATGCTACGATAGTAATTCAACTTAGTACGAGGGGAACTGTTAATTCACACAAATGATCATCATGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCATGTCTCGGATTATGACTGAATGCCTCTTAGTCAGAATTCAAGCTAGGAAGCGGCACCTATCCCCTGCACCCGTTTGTCGACCCACAGTAGGGCTGCACTCGCGGGCTCGTGTCGTTGGTGAAGCCCCCCACAGTGGATGCTCTTTGGGGGACTGCCTCTTAATGCAATTCCCGTCGGGAGGTTGGCAAAATCCTTTGTAGACGACTTAAATACGTGACGGGGTATTGTAAGTGGCAGAGTGGCCTTGCTACCACGATCCACTGACATTCAGCCCTGTGTCGCAACAAATCATTCCCCCCT
AmTr_v1.0_scaffold00017	Ensembl_Plants	rRNA	7115709	7115826	.	+	.	ID=gene:ENSRNA049458356	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGGTGCGAATATATTAGCATGAATGCACCAGATACCATCCGAACTTTAAAGTAAGCTTGCTTGGGCAAGAGCAGTACTAGGATGGGTGACCTCCTAGGAAGTCCTTGAGTCGCATCCC	AmTr_v1.0_scaffold00017	Ensembl_Plants	nonLTR	7115707	7115829	736	+	.	ID=133454	repeat_name=RXX_Gk_DX402720.1_7357	repeat_type=Unknown	sequence=TGGGTGCGAATATATTAGCATGAATGCACCAGATACCATCCGAACTTTAAAGTAAGCTTGCTTGGGCAAGAGCAGTACTAGGATGGGTGACCTCCTAGGAAGTCCTTGAGTCGCATCCCTTT
AmTr_v1.0_scaffold00046	Ensembl_Plants	rRNA	1285250	1285734	.	+	.	ID=gene:ENSRNA049457354	Name=LSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic large subunit ribosomal RNA	sequence=TGGAACAATGTAGGCAAGGAAGTCGGCAAAATGGATCCATAACTTCGGGAAAAGGATTGACTTTGAGGGATGGGCTCAGGGGTCCCCGCCTCGAACCCGTCGGTTGTCGGCGAACTGCTCGAGCTGCTCCCACGGAGAGAGCGGGTCGCCGCGTGCCGGCCGGGGACAAACAGGGAACGGCCCGCTTGGGGGCCTTCCCCTACCATCGAACAGCTGACTCAGAATTGGTACAAACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCATGCGGATGTTGACGCAATGTGATTTATGCCCAGTGCTCTGAATGTCAAAGTAAAGAAATTCAACCAAGTGGGAGTAACTATGACTCTCTTAAGGGAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCATTGTCCTTGTCTACTATCTAGCGAAACCACAGCCAAGGGAACGGGCTTGG	AmTr_v1.0_scaffold00046	Ensembl_Plants	LTR/Gypsy	1284192	1286138	13510	+	.	ID=123530	repeat_name=LTR_Al_scaffold_0003_560	repeat_type=LTRs	sequence=CTGAGCGGGGCGAGGCCAGAGGAAACTTTGATGGAGGCCCGCAACGAAACTGACGTGCAAATCGTTCCTTTAACTTGGGTATGGGTGCAAAAGACTATCGAACTGTCTAGTTGGTTCCCTCCAAAGTTTCCTTCAAGATAGCTGGAGCCCGTAAACGAGTTCTATCAAGTAAAGCCAATGATTAGAGGCATTGGGGGAGGCATTGGGGGCGCAATGCCCTCGACCTGTTCTCAAACTTTAAATAGGTAGGAACGAGTGGCTGCTCCGTCGAGTCACTCCACAGAATCGAGCGCTCCAAGTGTGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAATCGAAAGCCGGGATACGGTGCCGAATTACGCGCTAACCCAAAACCCACAAAGGATGTTGGTTGATTAAGAAGCAGGACGGTGGTCATGGAAGTCGAAATCCACTAAGAAGTGTGTAACAACTCACCGGCCAAATCAACTAGCCCCGAAATGGATGGCATTGAAGTGTGCAACCCACACTCGGCCGTCAGGGCGATTGCCATGCCCCGATGAGTAGGAGGGCACGACAGTTGCTGTGAAACCTGGGGCACGAGCCCTAGCGGAGCAGCCGTCGATGCAGATCTTGGTGGTAGTAGTAAATATTCAAATGAGAACTTTGAATGCCAAAGTGGGAAAGGTTCCATGCGAACGGCAGTTGCACATGGGTTAGTTGATCCTAAGAGTCGGGGGAAGCCCATCCGAGAGCACTGCTAGCATGAGCTTCGACAGGAAATCGGGTTAAAATTCCTGAACCGGGACATGGCGGCAGACGACAACGTTAGGGAGTCCAAAGACGTCGTCGAGGGCTTCGAGAAGAGTTATCTTTTATGTTTAACAACCTGCCCACCCTGGAAATGGCTCAGCTGGAGGTAGGGTCCAGAGGCTGGAAGTGCACCGCAAATTGCGTGGTATCCGGTGTGACTCCGGCGGCCCATGAAAATATGGAGGACCGAGTGCCGCGCACGCCCTGTCGTACTCATAACCACATCAGGTCTCCAAGATGAACAACCTCTGGTCGATGGAACAATGTAGGCAAGGAAGTCGGCAAAATGGATCCATAACTTCGGGAAAAGGATTGACTTTGAGGGATGGGCTCAGGGGTCCCCGCCTCGAACCCGTCGGTTGTCGGCGAACTGCTCGAGCTGCTCCCACGGAGAGAGCGGGTCGCCGCGTGCCGGCCGGGGACAAACAGGGAACGGCCCGCTTGGGGGCCTTCCCCTACCATCGAACAGCTGACTCAGAATTGGTACAAACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCATGCGGATGTTGACGCAATGTGATTTATGCCCAGTGCTCTGAATGTCAAAGTAAAGAAATTCAACCAAGTGGGAGTAACTATGACTCTCTTAAGGGAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCATTGTCCTTGTCTACTATCTAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATAAGCAGGGAAAGAAGACCCTTTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGATGTGTATGATAAGTGGGAGCTGCCCCCAGTGGCACAAGTGAAATACCACTACTTTTAACACTAATTTAGTTATTCCGTGAGTTGGAGGTGGGGCATCACCCCTCGTTTTGGCTCCAAGGCTCGCCCTCGGCGGGCTGATCCGGGTGGATGACATTGTCAGGTGGGGAGTTAGGCTGGGGCGGCACATCTATTAAAAGATAACACAGGTGTCCTAAGATGAGCTCAACAAGAACATAAATCTCGTGTGGAACAAAAGGGTAAAACTTCATTTGATTCTGATTTCCAGTACGAATACGAACCATTAAAGCGTGGCCTATCAATCCTTCAAACCTTCGG
AmTr_v1.0_scaffold00046	Ensembl_Plants	rRNA	1284035	1285247	.	+	.	ID=gene:ENSRNA049457343	Name=LSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic large subunit ribosomal RNA	sequence=CCCAAGCACTCCCCACTCGACTGGCCTCTTTCTCCTTCGACATATAAACAAAATCTAGAAATCTTAAAATCACTAACTATTTGTAACTGCCCATTGATGTTAATTTTTAGAGCATTCTCGGTGAATAAATCCTCAACTGCCTCAAATGTGCGATGGTCCTGAGCGGGGCGAGGCCAGAGGAAACTTTGATGGAGGCCCGCAACGAAACTGACGTGCAAATCGTTCCTTTAACTTGGGTATGGGTGCAAAAGACTATCGAACTGTCTAGTTGGTTCCCTCCAAAGTTTCCTTCAAGATAGCTGGAGCCCGTAAACGAGTTCTATCAAGTAAAGCCAATGATTAGAGGCATTGGGGGAGGCATTGGGGGCGCAATGCCCTCGACCTGTTCTCAAACTTTAAATAGGTAGGAACGAGTGGCTGCTCCGTCGAGTCACTCCACAGAATCGAGCGCTCCAAGTGTGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAATCGAAAGCCGGGATACGGTGCCGAATTACGCGCTAACCCAAAACCCACAAAGGATGTTGGTTGATTAAGAAGCAGGACGGTGGTCATGGAAGTCGAAATCCACTAAGAAGTGTGTAACAACTCACCGGCCAAATCAACTAGCCCCGAAATGGATGGCATTGAAGTGTGCAACCCACACTCGGCCGTCAGGGCGATTGCCATGCCCCGATGAGTAGGAGGGCACGACAGTTGCTGTGAAACCTGGGGCACGAGCCCTAGCGGAGCAGCCGTCGATGCAGATCTTGGTGGTAGTAGTAAATATTCAAATGAGAACTTTGAATGCCAAAGTGGGAAAGGTTCCATGCGAACGGCAGTTGCACATGGGTTAGTTGATCCTAAGAGTCGGGGGAAGCCCATCCGAGAGCACTGCTAGCATGAGCTTCGACAGGAAATCGGGTTAAAATTCCTGAACCGGGACATGGCGGCAGACGACAACGTTAGGGAGTCCAAAGACGTCGTCGAGGGCTTCGAGAAGAGTTATCTTTTATGTTTAACAACCTGCCCACCCTGGAAATGGCTCAGCTGGAGGTAGGGTCCAGAGGCTGGAAGTGCACCGCAAATTGCGTGGTATCCGGTGTGACTCCGGCGGCCCATGAAAATATGGAGGACCGAGTGCCGCGCACGCCCTGTCGTACTCATAACCACATCAGGTCTCCAAGATGAACAACCTCTGGTC	AmTr_v1.0_scaffold00046	Ensembl_Plants	LTR/Gypsy	1284192	1286138	13510	+	.	ID=123530	repeat_name=LTR_Al_scaffold_0003_560	repeat_type=LTRs	sequence=CTGAGCGGGGCGAGGCCAGAGGAAACTTTGATGGAGGCCCGCAACGAAACTGACGTGCAAATCGTTCCTTTAACTTGGGTATGGGTGCAAAAGACTATCGAACTGTCTAGTTGGTTCCCTCCAAAGTTTCCTTCAAGATAGCTGGAGCCCGTAAACGAGTTCTATCAAGTAAAGCCAATGATTAGAGGCATTGGGGGAGGCATTGGGGGCGCAATGCCCTCGACCTGTTCTCAAACTTTAAATAGGTAGGAACGAGTGGCTGCTCCGTCGAGTCACTCCACAGAATCGAGCGCTCCAAGTGTGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAATCGAAAGCCGGGATACGGTGCCGAATTACGCGCTAACCCAAAACCCACAAAGGATGTTGGTTGATTAAGAAGCAGGACGGTGGTCATGGAAGTCGAAATCCACTAAGAAGTGTGTAACAACTCACCGGCCAAATCAACTAGCCCCGAAATGGATGGCATTGAAGTGTGCAACCCACACTCGGCCGTCAGGGCGATTGCCATGCCCCGATGAGTAGGAGGGCACGACAGTTGCTGTGAAACCTGGGGCACGAGCCCTAGCGGAGCAGCCGTCGATGCAGATCTTGGTGGTAGTAGTAAATATTCAAATGAGAACTTTGAATGCCAAAGTGGGAAAGGTTCCATGCGAACGGCAGTTGCACATGGGTTAGTTGATCCTAAGAGTCGGGGGAAGCCCATCCGAGAGCACTGCTAGCATGAGCTTCGACAGGAAATCGGGTTAAAATTCCTGAACCGGGACATGGCGGCAGACGACAACGTTAGGGAGTCCAAAGACGTCGTCGAGGGCTTCGAGAAGAGTTATCTTTTATGTTTAACAACCTGCCCACCCTGGAAATGGCTCAGCTGGAGGTAGGGTCCAGAGGCTGGAAGTGCACCGCAAATTGCGTGGTATCCGGTGTGACTCCGGCGGCCCATGAAAATATGGAGGACCGAGTGCCGCGCACGCCCTGTCGTACTCATAACCACATCAGGTCTCCAAGATGAACAACCTCTGGTCGATGGAACAATGTAGGCAAGGAAGTCGGCAAAATGGATCCATAACTTCGGGAAAAGGATTGACTTTGAGGGATGGGCTCAGGGGTCCCCGCCTCGAACCCGTCGGTTGTCGGCGAACTGCTCGAGCTGCTCCCACGGAGAGAGCGGGTCGCCGCGTGCCGGCCGGGGACAAACAGGGAACGGCCCGCTTGGGGGCCTTCCCCTACCATCGAACAGCTGACTCAGAATTGGTACAAACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCATGCGGATGTTGACGCAATGTGATTTATGCCCAGTGCTCTGAATGTCAAAGTAAAGAAATTCAACCAAGTGGGAGTAACTATGACTCTCTTAAGGGAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCATTGTCCTTGTCTACTATCTAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATAAGCAGGGAAAGAAGACCCTTTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGATGTGTATGATAAGTGGGAGCTGCCCCCAGTGGCACAAGTGAAATACCACTACTTTTAACACTAATTTAGTTATTCCGTGAGTTGGAGGTGGGGCATCACCCCTCGTTTTGGCTCCAAGGCTCGCCCTCGGCGGGCTGATCCGGGTGGATGACATTGTCAGGTGGGGAGTTAGGCTGGGGCGGCACATCTATTAAAAGATAACACAGGTGTCCTAAGATGAGCTCAACAAGAACATAAATCTCGTGTGGAACAAAAGGGTAAAACTTCATTTGATTCTGATTTCCAGTACGAATACGAACCATTAAAGCGTGGCCTATCAATCCTTCAAACCTTCGG
AmTr_v1.0_scaffold00046	Ensembl_Plants	rRNA	1285769	1286253	.	+	.	ID=gene:ENSRNA049457278	Name=LSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic large subunit ribosomal RNA	sequence=TGACTCTAGTCCGACTTTGTGAAATGACTTGAGATGTGTATGATAAGTGGGAGCTGCCCCCAGTGGCACAAGTGAAATACCACTACTTTTAACACTAATTTAGTTATTCCGTGAGTTGGAGGTGGGGCATCACCCCTCGTTTTGGCTCCAAGGCTCGCCCTCGGCGGGCTGATCCGGGTGGATGACATTGTCAGGTGGGGAGTTAGGCTGGGGCGGCACATCTATTAAAAGATAACACAGGTGTCCTAAGATGAGCTCAACAAGAACATAAATCTCGTGTGGAACAAAAGGGTAAAACTTCATTTGATTCTGATTTCCAGTACGAATACGAACCATTAAAGCGTGGCCTATCAATCCTTCAAACCTTCGGGGCCTTCGAATACTATTCGGGTCTGAGGTCGGGTCATACCCAAACCGTTGCTGACCCTAATTGAAACCTCTTCTAATAAAATTTTTAGGAGTTTCTTAATTTGGTGGTTTAGAAA	AmTr_v1.0_scaffold00046	Ensembl_Plants	LTR/Gypsy	1284192	1286138	13510	+	.	ID=123530	repeat_name=LTR_Al_scaffold_0003_560	repeat_type=LTRs	sequence=CTGAGCGGGGCGAGGCCAGAGGAAACTTTGATGGAGGCCCGCAACGAAACTGACGTGCAAATCGTTCCTTTAACTTGGGTATGGGTGCAAAAGACTATCGAACTGTCTAGTTGGTTCCCTCCAAAGTTTCCTTCAAGATAGCTGGAGCCCGTAAACGAGTTCTATCAAGTAAAGCCAATGATTAGAGGCATTGGGGGAGGCATTGGGGGCGCAATGCCCTCGACCTGTTCTCAAACTTTAAATAGGTAGGAACGAGTGGCTGCTCCGTCGAGTCACTCCACAGAATCGAGCGCTCCAAGTGTGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAATCGAAAGCCGGGATACGGTGCCGAATTACGCGCTAACCCAAAACCCACAAAGGATGTTGGTTGATTAAGAAGCAGGACGGTGGTCATGGAAGTCGAAATCCACTAAGAAGTGTGTAACAACTCACCGGCCAAATCAACTAGCCCCGAAATGGATGGCATTGAAGTGTGCAACCCACACTCGGCCGTCAGGGCGATTGCCATGCCCCGATGAGTAGGAGGGCACGACAGTTGCTGTGAAACCTGGGGCACGAGCCCTAGCGGAGCAGCCGTCGATGCAGATCTTGGTGGTAGTAGTAAATATTCAAATGAGAACTTTGAATGCCAAAGTGGGAAAGGTTCCATGCGAACGGCAGTTGCACATGGGTTAGTTGATCCTAAGAGTCGGGGGAAGCCCATCCGAGAGCACTGCTAGCATGAGCTTCGACAGGAAATCGGGTTAAAATTCCTGAACCGGGACATGGCGGCAGACGACAACGTTAGGGAGTCCAAAGACGTCGTCGAGGGCTTCGAGAAGAGTTATCTTTTATGTTTAACAACCTGCCCACCCTGGAAATGGCTCAGCTGGAGGTAGGGTCCAGAGGCTGGAAGTGCACCGCAAATTGCGTGGTATCCGGTGTGACTCCGGCGGCCCATGAAAATATGGAGGACCGAGTGCCGCGCACGCCCTGTCGTACTCATAACCACATCAGGTCTCCAAGATGAACAACCTCTGGTCGATGGAACAATGTAGGCAAGGAAGTCGGCAAAATGGATCCATAACTTCGGGAAAAGGATTGACTTTGAGGGATGGGCTCAGGGGTCCCCGCCTCGAACCCGTCGGTTGTCGGCGAACTGCTCGAGCTGCTCCCACGGAGAGAGCGGGTCGCCGCGTGCCGGCCGGGGACAAACAGGGAACGGCCCGCTTGGGGGCCTTCCCCTACCATCGAACAGCTGACTCAGAATTGGTACAAACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCATGCGGATGTTGACGCAATGTGATTTATGCCCAGTGCTCTGAATGTCAAAGTAAAGAAATTCAACCAAGTGGGAGTAACTATGACTCTCTTAAGGGAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCATTGTCCTTGTCTACTATCTAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATAAGCAGGGAAAGAAGACCCTTTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGATGTGTATGATAAGTGGGAGCTGCCCCCAGTGGCACAAGTGAAATACCACTACTTTTAACACTAATTTAGTTATTCCGTGAGTTGGAGGTGGGGCATCACCCCTCGTTTTGGCTCCAAGGCTCGCCCTCGGCGGGCTGATCCGGGTGGATGACATTGTCAGGTGGGGAGTTAGGCTGGGGCGGCACATCTATTAAAAGATAACACAGGTGTCCTAAGATGAGCTCAACAAGAACATAAATCTCGTGTGGAACAAAAGGGTAAAACTTCATTTGATTCTGATTTCCAGTACGAATACGAACCATTAAAGCGTGGCCTATCAATCCTTCAAACCTTCGG
AmTr_v1.0_scaffold00049	Ensembl_Plants	rRNA	1535391	1535507	.	-	.	ID=gene:ENSRNA049457085	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGGTGCGATCATACCAGAACTAATATACCGGAACGCATCAGAACTCCAAAGTTAAGCATACTTGGGCAAGAGAATTCTTTCTAGGTGACATCGTGGGAAGTCCTTGTGTCGCATCCC	AmTr_v1.0_scaffold00049	Ensembl_Plants	nonLTR	1535386	1535509	687	-	.	ID=133450	repeat_name=RXX_Gk_DX402720.1_7357	repeat_type=Unknown	sequence=ATGGGTGCGATCATACCAGAACTAATATACCGGAACGCATCAGAACTCCAAAGTTAAGCATACTTGGGCAAGAGAATTCTTTCTAGGTGACATCGTGGGAAGTCCTTGTGTCGCATCCCTGTT
AmTr_v1.0_scaffold00034	Ensembl_Plants	rRNA	4907711	4907829	.	-	.	ID=gene:ENSRNA049457049	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGGTGCGGTCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGAAGTTAAGCGTGCTTGGGCAAGAGTAGTACTAGGATGGGTGACCTCTTGGGAAGTCCTTGTGTCGCACCCC	AmTr_v1.0_scaffold00034	Ensembl_Plants	nonLTR	4907703	4907829	1052	-	.	ID=133458	repeat_name=RXX_Gk_DX402720.1_7357	repeat_type=Unknown	sequence=GGGTGCGGTCATACCAGCACTAATGCACCGGATCCCATCAGAACTCCGAAGTTAAGCGTGCTTGGGCAAGAGTAGTACTAGGATGGGTGACCTCTTGGGAAGTCCTTGTGTCGCACCCCTTTTTAT
AmTr_v1.0_scaffold00034	Ensembl_Plants	rRNA	4905698	4905813	.	-	.	ID=gene:ENSRNA049457004	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGTGCTCATACAAGCACTATTGCATCAGATCCCATCAGAACTTCGAAGTTAAGCGTGTTTGTGCAAGAGTAGTACTAGAATGGGTGACCTCATGGGAAGTCCTTGTGTCATAACCC	AmTr_v1.0_scaffold00034	Ensembl_Plants	nonLTR	4905690	4905816	806	-	.	ID=133457	repeat_name=RXX_Gk_DX402720.1_7357	repeat_type=Unknown	sequence=ATCGGTGCTCATACAAGCACTATTGCATCAGATCCCATCAGAACTTCGAAGTTAAGCGTGTTTGTGCAAGAGTAGTACTAGAATGGGTGACCTCATGGGAAGTCCTTGTGTCATAACCCTATTTGT
AmTr_v1.0_scaffold00142	Ensembl_Plants	rRNA	267819	267938	.	-	.	ID=gene:ENSRNA049456871	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGGTGCAGTCTTACCAGTATTATTGCATTGAATCCCATAAGAACTTTGAAGTTAAGCATGCTTTGACAAGAATAGGACTAGGATGGATGACCTCTTGGGAAGTCCTTGTGGTCGCCACTT	AmTr_v1.0_scaffold00142	Ensembl_Plants	nonLTR	267813	267939	690	-	.	ID=133461	repeat_name=RXX_Gk_DX402720.1_7357	repeat_type=Unknown	sequence=TGGGTGCAGTCTTACCAGTATTATTGCATTGAATCCCATAAGAACTTTGAAGTTAAGCATGCTTTGACAAGAATAGGACTAGGATGGATGACCTCTTGGGAAGTCCTTGTGGTCGCCACTTTCTTT
AmTr_v1.0_scaffold00131	Ensembl_Plants	rRNA	1399902	1400541	.	+	.	ID=gene:ENSRNA049456472	Name=SSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic small subunit ribosomal RNA	sequence=TACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTAAAAGATTAAGCCATGCATGTGTAAGTATGAATTAATTCAGACTGTGAAACTACGAATGACTCATTAAATCAGTTATAGTTTGTTTGATGGTACCTGCAACTCGGATAACCGTAGTAATTCTAGAGCTAGTACGTGTAAGAAATCCTGACCTCTAGAAGGGATGCATTTATTAGATAAAAGGCCAGCGCGAGCTTTACCCGATGTTTTGGTGAATCATGATAACTCGACAGATCGCACGCCCATTGTGCTGGCGACGCATCATTCAAATTTCTACCATATCAACTTTCGATGGTGGGATACGAGCCTACCATGGTGGTGACGGGTGACGGAGGATTAAGAGGGACAGTCAGAGGCATTTGTAGTTCATAGTCATAGGTGAAATTTTTGGATTTATGAAAGACGAACCACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCAACTAGGGATCGATAGATGTTGCTCTTAGGACTCTATTGGCACCTTATGAGAAATCAAAGTCCTTGGGTTCCTATTTCTTCTGCACTATGAATG	AmTr_v1.0_scaffold00131	Ensembl_Plants	LTR/Copia	1400266	1400519	1992	+	.	ID=146779	repeat_name=RLC_Gk_DX402782.1_7369	repeat_type=LTRs	sequence=GGAGGATTAAGAGGGACAGTCAGAGGCATTTGTAGTTCATAGTCATAGGTGAAATTTTTGGATTTATGAAAGACGAACCACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCAACTAGGGATCGATAGATGTTGCTCTTAGGACTCTATTGGCACCTTATGAGAAATCAAAGTCCTTGGGTTCC
AmTr_v1.0_scaffold00131	Ensembl_Plants	rRNA	1399902	1400541	.	+	.	ID=gene:ENSRNA049456472	Name=SSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic small subunit ribosomal RNA	sequence=TACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTAAAAGATTAAGCCATGCATGTGTAAGTATGAATTAATTCAGACTGTGAAACTACGAATGACTCATTAAATCAGTTATAGTTTGTTTGATGGTACCTGCAACTCGGATAACCGTAGTAATTCTAGAGCTAGTACGTGTAAGAAATCCTGACCTCTAGAAGGGATGCATTTATTAGATAAAAGGCCAGCGCGAGCTTTACCCGATGTTTTGGTGAATCATGATAACTCGACAGATCGCACGCCCATTGTGCTGGCGACGCATCATTCAAATTTCTACCATATCAACTTTCGATGGTGGGATACGAGCCTACCATGGTGGTGACGGGTGACGGAGGATTAAGAGGGACAGTCAGAGGCATTTGTAGTTCATAGTCATAGGTGAAATTTTTGGATTTATGAAAGACGAACCACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCAACTAGGGATCGATAGATGTTGCTCTTAGGACTCTATTGGCACCTTATGAGAAATCAAAGTCCTTGGGTTCCTATTTCTTCTGCACTATGAATG	AmTr_v1.0_scaffold00131	Ensembl_Plants	MobileElement	1399882	1400277	2852	-	.	ID=149310	repeat_name=TXX_Ge_DX391249.1_586	repeat_type=Unknown	sequence=CTTAATCCTCCGTCACCCGTCACCACCATGGTAGGCTCGTATCCCACCATCGAAAGTTGATATGGTAGAAATTTGAATGATGCGTCGCCAGCACAATGGGCGTGCGATCTGTCGAGTTATCATGATTCACCAAAACATCGGGTAAAGCTCGCGCTGGCCTTTTATCTAATAAATGCATCCCTTCTAGAGGTCAGGATTTCTTACACGTACTAGCTCTAGAATTACTACGGTTATCCGAGTTGCAGGTACCATCAAACAAACTATAACTGATTTAATGAGTCATTCGTAGTTTCACAGTCTGAATTAATTCATACTTACACATGCATGGCTTAATCTTTTAGACAAGCATATGACTACTGGCAGGATCAACCAGGTAGCAGCCCACAACGACATGG
AmTr_v1.0_scaffold00051	Ensembl_Plants	rRNA	1962183	1963991	.	+	.	ID=gene:ENSRNA049456364	Name=SSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic small subunit ribosomal RNA	sequence=TACCTGGTTTATCCTGCCAGTAGTCATATGCTTGTCTGAAAGATTAAGCCATGCATGTGTAAGTATGAACTAATTCAGACTGTAAAACTGCGAATGGCTCATTAAATCAACTGTAGTTTGTTTGATGGTACCTGCTACTCGGATAACCATAGTAATTCTAGAGCTCATACATGCAAGAAATCCCGACCTTTGGAAGGGATGTATTTAATAGATAAAAGGCTAGCGTGGGCTTTACCCGATGCTTTGGTGAATCATGATAACTCGACGGATCACACGGCCATTGTGATGGCGACGCAACATTCAAATTTCTGCCCTATCAACTTCGATGGTAGGATAGGGCCCTGCCATGTTGGTGACGGGTGATAGACAATTAGGGTTCGATTCTGGAGAGGGAGCCTAAGAAACAGCTACCACATCCAAGGAAGGCAGCAGGCACGCAAATTACCCAATCCTGACACGGGGAAGTAGTGACAATAAATAACAATACCGGGCTCCAAGATTCTTGTAATTGGAATCAGTACAATCTAAACTCCTTAACGAGCATCCATTGGAGGGCAAGTCTGGTGCCAGCCGCCGCAGTAATTCCAGCTCCAATAGCGTATATTTTAGTTGTTACAGTTAAAAAGATCGTAGTTGGATCTTGGGCGGGGCCGACCGGTCCGACTTCATGGTGTGCACCAGCCGTCCCGTCCCTTCACTAGGTGATGCATTCATGGCCTTAACTGGCCGGGTCGTGCCTCTAGCCTCGTTCCTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACCCTCTGAATACATTAGCATGGGATAACATCACAAGATTTCGATCCTATTGTGTTGGCCTGTGGGATCGGAGTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTCCATAGTCAGAGGTGAAATTCTTTGATTTATGAAAGACGAACCACTGCAAAAGGATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATCAACGATGTCAACTGGGGATCGGCAGATGTTGCACTTAGGACTCCGTCGGCACCTTACGAGAAATCAAAGTCATTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGTGGCTTAATTTCACTCAACACACAAAAACTTAACAGGTCCAGACATAGTAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGCGAAGTGATTTGTCTGGCTAATTCCGTTAACGAACGAGACCTCAGTCTGCTCACTAGCTACGTGGAGGTATTCTCCACGACCAGCTTCTTAGAGGGACTATGGCCGTTTAGGCCACGAAAGTATGACGCAATAAAAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCCCGCTACACTGATGTATTCAACGAGTATATAGCCTTGGCCGACAGGCCAGGGTAATCTGTTGAAATTTCATTCTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCTTAGCAAGCGCGAGTCATCAGCTCGCGTTGACTATGTCCCTACCCTTTGTACACACTGCCCATCGCTCCTACCGATTGAATGGTCCAATGAAGTGCTCGAATCGAGGTGACGGAGGCGGTCCGTTGCTGGCGATGTCGTGAGAAGTCCACTGAACATTATCATTTAGAGGAAGGAGAAGTCATAACAAGGTTTCCGTCGGTGAACCTGCGGAAGGATCATTG	AmTr_v1.0_scaffold00051	Ensembl_Plants	MobileElement	1962144	1962514	2430	-	.	ID=123511	repeat_name=TXX_Ge_DX391181.1_518	repeat_type=Unknown	sequence=CTACCATCGAAGTTGATAGGGCAGAAATTTGAATGTTGCGTCGCCATCACAATGGCCGTGTGATCCGTCGAGTTATCATGATTCACCAAAGCATCGGGTAAAGCCCACGCTAGCCTTTTATCTATTAAATACATCCCTTCCAAAGGTCGGGATTTCTTGCATGTATGAGCTCTAGAATTACTATGGTTATCCGAGTAGCAGGTACCATCAAACAAACTACAGTTGATTTAATGAGCCATTCGCAGTTTTACAGTCTGAATTAGTTCATACTTACACATGCATGGCTTAATCTTTCAGACAAGCATATGACTACTGGCAGGATAAACCAGGTAGCATCCCACAACGACATGGGGGAACCACATGGGACCCA
AmTr_v1.0_scaffold00051	Ensembl_Plants	rRNA	1987004	1988066	.	+	.	ID=gene:ENSRNA049456353	Name=SSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic small subunit ribosomal RNA	sequence=GTACCAGAGGATGCTTACTTGTGTGGCCTTGAGTGGCTCACCGCATGGATGTCCACCACTCGTCTCATTTGGTAGTGAAATGCAGGGCTCCATTCAGGCCCTACTTTGGGTCCCAAGTGGTTCCCCCTTGAAATCCTGACCTCTGTAAGGGATGCATTTATTAGAAAAAAGGCCAGTGCGGCTTTGCCCGATGCTTTGGTGAATCATGATAACTCGACGGATCACATAGCCATTGTGCTGGCGACGCATCATTCAATTTTTTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACTATGGTGGTGACGGGTGACGAAGAATTAGGGTTGTATTCCGGAGAGGGAGCCTGATAAACGGCTACCACATCCAAGGAAGGCAGTAGGCGTGCAAATTACCCAATTTTGACATGGGGAGGTAGTGGCAATAACTTACAATACCGGGCTCCAAGAGTCTGGTAATTAGAATGAGTACAATCTAAACCCATTAACGAAGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGTGGTAATTCTAACTCTAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGCTGAGTCGACTTGTCCGCCTTCATGGTGTGCACTGGCCATCCCGTCCCTTCACCCGGCGACGTGTTCCTCGCCTTACCTGGCCAGGTCGTGCCTTCGGCATCGTTGCTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTTTGAATACATTAGCATGGGATAACATCACAAGATTTTGATCCTATTGTGTTGGCCTTCGGGATCGGAGTTATGATTAAGAGGGACAGTCGGGGGCTTCGTATTTCATAGTCAGAGGTGAAATTATTGGATTTATGAAAGACGAACCACTACGAAAGCATTTTTCGAGGATGTTTTCATTAATCACGAATGAAAGTTGGGGGCTCGAAGACGATAAGATACCGTCCTAGTCTAAACCATAAACGATGCCGATCAAGGATCGACAGATGTTGCTCTTAGGACTCCGTCTGTACCTTATGAGAAATCAAAGTCTTTGGGTTTCG	AmTr_v1.0_scaffold00051	Ensembl_Plants	LTR	1987134	1988282	8189	+	.	ID=10528	repeat_name=LTR_Al_scaffold_0183_279	repeat_type=LTRs	sequence=AATCCTGACCTCTGTAAGGGATGCATTTATTAGAAAAAAGGCCAGTGCGGCTTTGCCCGATGCTTTGGTGAATCATGATAACTCGACGGATCACATAGCCATTGTGCTGGCGACGCATCATTCAATTTTTTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACTATGGTGGTGACGGGTGACGAAGAATTAGGGTTGTATTCCGGAGAGGGAGCCTGATAAACGGCTACCACATCCAAGGAAGGCAGTAGGCGTGCAAATTACCCAATTTTGACATGGGGAGGTAGTGGCAATAACTTACAATACCGGGCTCCAAGAGTCTGGTAATTAGAATGAGTACAATCTAAACCCATTAACGAAGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGTGGTAATTCTAACTCTAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGCTGAGTCGACTTGTCCGCCTTCATGGTGTGCACTGGCCATCCCGTCCCTTCACCCGGCGACGTGTTCCTCGCCTTACCTGGCCAGGTCGTGCCTTCGGCATCGTTGCTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTTTGAATACATTAGCATGGGATAACATCACAAGATTTTGATCCTATTGTGTTGGCCTTCGGGATCGGAGTTATGATTAAGAGGGACAGTCGGGGGCTTCGTATTTCATAGTCAGAGGTGAAATTATTGGATTTATGAAAGACGAACCACTACGAAAGCATTTTTCGAGGATGTTTTCATTAATCACGAATGAAAGTTGGGGGCTCGAAGACGATAAGATACCGTCCTAGTCTAAACCATAAACGATGCCGATCAAGGATCGACAGATGTTGCTCTTAGGACTCCGTCTGTACCTTATGAGAAATCAAAGTCTTTGGGTTTCGGGGGGGAGTATTGTCGCAAGGCTGAAACTTAAAGGAATTGATGGAAGGGCACCACTAGGAGTGGAGCCTGTGGCTTAATTTGACTCAACATGGGGAAACATACCAGGTCCAGACATAGTAAGGATTGACAGGCTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGCCCGTTCTTAGTTGGTGGGGCACTTTGTCTAGTTAATTCCGTTAA
AmTr_v1.0_scaffold00051	Ensembl_Plants	rRNA	1977633	1978069	.	+	.	ID=gene:ENSRNA049456339	Name=LSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic large subunit ribosomal RNA	sequence=CCCATTGAGTTTAAGCATATTAATAAGTGGAGGAAAAGAAACCTACCAAGATTCCACTAGTAACGGTGAACAAACCGGGAACTGCCCAGCGTGAGAATCAAGCGGCCCCACTGCTCGAATTGTAGTCTGTAGAAGCATCCTCAGCGGCGAACTGGGCATAAATCCCCTGGAACAGGGCGCCTGAGAGGGTGAGAGCCCTGTCATGCCCGGACCCTGCCGCACCACGAGGCGCTATGGCGAGTCGGGTTGTTTGGGAATGCAGCCCTATTTGGGCGGTAAATTCCGTTCAAGGCTAAATACCGACGAGAGAATAGAGAACAAGTGTCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAAAGTGCTTGAAATTGTTGGGAGGGAACCGGATGGGGGCTGGCAGTGCCCCGCGGTTGGATGCAAAACGTCC	AmTr_v1.0_scaffold00051	Ensembl_Plants	MobileElement	1977221	1978066	3707	+	.	ID=123513	repeat_name=TXX_Gr_DX403825.1_7641	repeat_type=Unknown	sequence=TCTCAACAACGGATATCTTGGCTCTCACCATGATGAAAAACATGGCGAAATGCGATACTTTGTGTGAATTGCCGAATCCCGTGAATCATCGAGTCTTTGAATGCAAGTTACGCCCAAGGGTGTAGGTTGAGGGCACGCCTGCCTGGGATGCATGCCAAACGCCGCCCCCTCCTCACCCCTGCGCTCACTAGTGCATGGGCTCAGGGCGCAAGATGGCCACCCGTTCCCCTCCCCTCACGTTGATGGTGCGGTAGGCTCAAACCCAAGACCACAGCTTGCAGGTGATGCGACAATCAGTGGCCTCCACAGTGTGTCGTTGTCGCAATGCGGCTTAGGTTGGTCCCCAGCAAACACACAGACTTGCGGTCCATGCAAAGATTCCTCACTGCGATCCTAGGTCAGGTGGGGCCACCCATTGAGTTTAAGCATATTAATAAGTGGAGGAAAAGAAACCTACCAAGATTCCACTAGTAACGGTGAACAAACCGGGAACTGCCCAGCGTGAGAATCAAGCGGCCCCACTGCTCGAATTGTAGTCTGTAGAAGCATCCTCAGCGGCGAACTGGGCATAAATCCCCTGGAACAGGGCGCCTGAGAGGGTGAGAGCCCTGTCATGCCCGGACCCTGCCGCACCACGAGGCGCTATGGCGAGTCGGGTTGTTTGGGAATGCAGCCCTATTTGGGCGGTAAATTCCGTTCAAGGCTAAATACCGACGAGAGAATAGAGAACAAGTGTCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAAAGTGCTTGAAATTGTTGGGAGGGAACCGGATGGGGGCTGGCAGTGCCCCGCGGTTGGATGCAAAACG
AmTr_v1.0_scaffold00051	Ensembl_Plants	rRNA	1977633	1978069	.	+	.	ID=gene:ENSRNA049456339	Name=LSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic large subunit ribosomal RNA	sequence=CCCATTGAGTTTAAGCATATTAATAAGTGGAGGAAAAGAAACCTACCAAGATTCCACTAGTAACGGTGAACAAACCGGGAACTGCCCAGCGTGAGAATCAAGCGGCCCCACTGCTCGAATTGTAGTCTGTAGAAGCATCCTCAGCGGCGAACTGGGCATAAATCCCCTGGAACAGGGCGCCTGAGAGGGTGAGAGCCCTGTCATGCCCGGACCCTGCCGCACCACGAGGCGCTATGGCGAGTCGGGTTGTTTGGGAATGCAGCCCTATTTGGGCGGTAAATTCCGTTCAAGGCTAAATACCGACGAGAGAATAGAGAACAAGTGTCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAAAGTGCTTGAAATTGTTGGGAGGGAACCGGATGGGGGCTGGCAGTGCCCCGCGGTTGGATGCAAAACGTCC	AmTr_v1.0_scaffold00051	Ensembl_Plants	LTR	1977609	1978138	2924	+	.	ID=123533	repeat_name=LTR_Al_scaffold_0003_561	repeat_type=LTRs	sequence=CGATCCTAGGTCAGGTGGGGCCACCCATTGAGTTTAAGCATATTAATAAGTGGAGGAAAAGAAACCTACCAAGATTCCACTAGTAACGGTGAACAAACCGGGAACTGCCCAGCGTGAGAATCAAGCGGCCCCACTGCTCGAATTGTAGTCTGTAGAAGCATCCTCAGCGGCGAACTGGGCATAAATCCCCTGGAACAGGGCGCCTGAGAGGGTGAGAGCCCTGTCATGCCCGGACCCTGCCGCACCACGAGGCGCTATGGCGAGTCGGGTTGTTTGGGAATGCAGCCCTATTTGGGCGGTAAATTCCGTTCAAGGCTAAATACCGACGAGAGAATAGAGAACAAGTGTCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAAAGTGCTTGAAATTGTTGGGAGGGAACCGGATGGGGGCTGGCAGTGCCCCGCGGTTGGATGCAAAACGTCCTCATTGACAATCTGTTACTCAACATGCTGAGTGGACCGACGCGGGTCACCGTGGAGGGAGGAGCCCTGG
AmTr_v1.0_scaffold00051	Ensembl_Plants	rRNA	1989206	1989823	.	+	.	ID=gene:ENSRNA049456327	Name=LSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic large subunit ribosomal RNA	sequence=CCCGCTAAGTTTAAGCATATTAATAAGCGGAGGAAAAGAAGCTTACCAGGATTCCCCTAGTAACGGCGAGCGACCGGGAACTTCCCAGCATGGAAATCGAGCTGCCCCGCTGCGAAAATTGTAGTCTGTAGAAGTGTCCTCAGCTTTGGACTAGGCACAAGTCCCTTGGTGTGCCCGGACCTTGCCACACCACGAGGTGCTGTTGGCGAGTCGGGTTGTTTGGGAATGCAGCCCTAATTGGGCGGTAAATTATGTCCAAGGCTAAATACCAACGAGGGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTCAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCAGGAGGGAAGCGGATGGGGGCTGGCAGTACCCCGCTGTCGGATGCAGAATGTCCTCGTTGACAGTCCTTCACTCCGCTCACAAGTCAGACCAGCGTGGGTCACCGCGGAGGCAGGAGCCCAAGTGGTCGCTCTTGCCCGAGGGGATGCCGCCATGGTGACCGGGGGATGAAAGCACGCATTGATCGGACCGCCCCTTGCGGCAACTGAGCGCTCTTGGCACCAGTCTGCGGGCTCCCCATCCGGCCCGTCTTGAAACATGA	AmTr_v1.0_scaffold00051	Ensembl_Plants	MobileElement	1988926	1989613	2576	+	.	ID=123512	repeat_name=TXX_Gr_DX403825.1_7641	repeat_type=Unknown	sequence=GGGCACGCCTACCTGGTTGTCAAGCCAAATGCCGCCCCCTCCTCACCCCTACGAGCACCAGTGCAAGGGCTCGGAGCACAAGATGGTCACCCGTTCCCCTCCCCTCTCGTTGGTGGTGCGGTAGGCTCAAACCCAAGCCCACAACATGCGAGTGATGCGACATCGGTGGCCTCCATAGTGTGTCGCATCGCACCGTGGCTTGGGTTGGCCCCCAGCAAACCCACAGACTCGCTTTTCGTGCAAAGACGCCGCACTACGACCCCAGGTCAGGCGGAGCCACCCGCTAAGTTTAAGCATATTAATAAGCGGAGGAAAAGAAGCTTACCAGGATTCCCCTAGTAACGGCGAGCGACCGGGAACTTCCCAGCATGGAAATCGAGCTGCCCCGCTGCGAAAATTGTAGTCTGTAGAAGTGTCCTCAGCTTTGGACTAGGCACAAGTCCCTTGGTGTGCCCGGACCTTGCCACACCACGAGGTGCTGTTGGCGAGTCGGGTTGTTTGGGAATGCAGCCCTAATTGGGCGGTAAATTATGTCCAAGGCTAAATACCAACGAGGGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTCAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCAGGAGGGAAGCGGATGGGGGCTGGCAGTACCCCGCTGTCGGATGCAGAATG
AmTr_v1.0_scaffold00051	Ensembl_Plants	rRNA	1989206	1989823	.	+	.	ID=gene:ENSRNA049456327	Name=LSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic large subunit ribosomal RNA	sequence=CCCGCTAAGTTTAAGCATATTAATAAGCGGAGGAAAAGAAGCTTACCAGGATTCCCCTAGTAACGGCGAGCGACCGGGAACTTCCCAGCATGGAAATCGAGCTGCCCCGCTGCGAAAATTGTAGTCTGTAGAAGTGTCCTCAGCTTTGGACTAGGCACAAGTCCCTTGGTGTGCCCGGACCTTGCCACACCACGAGGTGCTGTTGGCGAGTCGGGTTGTTTGGGAATGCAGCCCTAATTGGGCGGTAAATTATGTCCAAGGCTAAATACCAACGAGGGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTCAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCAGGAGGGAAGCGGATGGGGGCTGGCAGTACCCCGCTGTCGGATGCAGAATGTCCTCGTTGACAGTCCTTCACTCCGCTCACAAGTCAGACCAGCGTGGGTCACCGCGGAGGCAGGAGCCCAAGTGGTCGCTCTTGCCCGAGGGGATGCCGCCATGGTGACCGGGGGATGAAAGCACGCATTGATCGGACCGCCCCTTGCGGCAACTGAGCGCTCTTGGCACCAGTCTGCGGGCTCCCCATCCGGCCCGTCTTGAAACATGA	AmTr_v1.0_scaffold00051	Ensembl_Plants	LTR	1989183	1990236	5313	+	.	ID=123532	repeat_name=LTR_Al_scaffold_0003_561	repeat_type=LTRs	sequence=GACCCCAGGTCAGGCGGAGCCACCCGCTAAGTTTAAGCATATTAATAAGCGGAGGAAAAGAAGCTTACCAGGATTCCCCTAGTAACGGCGAGCGACCGGGAACTTCCCAGCATGGAAATCGAGCTGCCCCGCTGCGAAAATTGTAGTCTGTAGAAGTGTCCTCAGCTTTGGACTAGGCACAAGTCCCTTGGTGTGCCCGGACCTTGCCACACCACGAGGTGCTGTTGGCGAGTCGGGTTGTTTGGGAATGCAGCCCTAATTGGGCGGTAAATTATGTCCAAGGCTAAATACCAACGAGGGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTCAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCAGGAGGGAAGCGGATGGGGGCTGGCAGTACCCCGCTGTCGGATGCAGAATGTCCTCGTTGACAGTCCTTCACTCCGCTCACAAGTCAGACCAGCGTGGGTCACCGCGGAGGCAGGAGCCCAAGTGGTCGCTCTTGCCCGAGGGGATGCCGCCATGGTGACCGGGGGATGAAAGCACGCATTGATCGGACCGCCCCTTGCGGCAACTGAGCGCTCTTGGCACCAGTCTGCGGGCTCCCCATCCGGCCCGTCTTGAAACATGAACCAAGGAGTCTAACATGAGTGCGAGTCAGCGGGTGTCCAAAGCCTGAAAGGCACAAGGAAGCTAAGTGGCAAGATCATCCCACCATGGGGGTCTTGCACTGCCGACCGACCTTGATCTTCTGTGAAGGGTTAGAGTGGGAGCATGCCTATTGGGACCCGAAAGATGTTGAACTATCCCTGAGCAGGGCGAGGTCAAAGGAAACTCTGGTGGAGACCCGTAGCGATACTGACATGCAAATCATTCATCTGACTTGGGAATAGGGGTGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCGAAAGTTTCCCTCTGGACAGCTGGAGCCCGTGAACGAGTTCTATCAAGTAAACCAATGATTAGAGGCATAGGGGGCGCAACGCCCTTGACCTATTCTCAGACGCTAGACA
AmTr_v1.0_scaffold00051	Ensembl_Plants	rRNA	1989834	1990119	.	+	.	ID=gene:ENSRNA049456317	Name=LSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic large subunit ribosomal RNA	sequence=CTAACATGAGTGCGAGTCAGCGGGTGTCCAAAGCCTGAAAGGCACAAGGAAGCTAAGTGGCAAGATCATCCCACCATGGGGGTCTTGCACTGCCGACCGACCTTGATCTTCTGTGAAGGGTTAGAGTGGGAGCATGCCTATTGGGACCCGAAAGATGTTGAACTATCCCTGAGCAGGGCGAGGTCAAAGGAAACTCTGGTGGAGACCCGTAGCGATACTGACATGCAAATCATTCATCTGACTTGGGAATAGGGGTGAAAGACTAATCGAACCGTCTAGTAGCTGG	AmTr_v1.0_scaffold00051	Ensembl_Plants	LTR	1989183	1990236	5313	+	.	ID=123532	repeat_name=LTR_Al_scaffold_0003_561	repeat_type=LTRs	sequence=GACCCCAGGTCAGGCGGAGCCACCCGCTAAGTTTAAGCATATTAATAAGCGGAGGAAAAGAAGCTTACCAGGATTCCCCTAGTAACGGCGAGCGACCGGGAACTTCCCAGCATGGAAATCGAGCTGCCCCGCTGCGAAAATTGTAGTCTGTAGAAGTGTCCTCAGCTTTGGACTAGGCACAAGTCCCTTGGTGTGCCCGGACCTTGCCACACCACGAGGTGCTGTTGGCGAGTCGGGTTGTTTGGGAATGCAGCCCTAATTGGGCGGTAAATTATGTCCAAGGCTAAATACCAACGAGGGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTCAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCAGGAGGGAAGCGGATGGGGGCTGGCAGTACCCCGCTGTCGGATGCAGAATGTCCTCGTTGACAGTCCTTCACTCCGCTCACAAGTCAGACCAGCGTGGGTCACCGCGGAGGCAGGAGCCCAAGTGGTCGCTCTTGCCCGAGGGGATGCCGCCATGGTGACCGGGGGATGAAAGCACGCATTGATCGGACCGCCCCTTGCGGCAACTGAGCGCTCTTGGCACCAGTCTGCGGGCTCCCCATCCGGCCCGTCTTGAAACATGAACCAAGGAGTCTAACATGAGTGCGAGTCAGCGGGTGTCCAAAGCCTGAAAGGCACAAGGAAGCTAAGTGGCAAGATCATCCCACCATGGGGGTCTTGCACTGCCGACCGACCTTGATCTTCTGTGAAGGGTTAGAGTGGGAGCATGCCTATTGGGACCCGAAAGATGTTGAACTATCCCTGAGCAGGGCGAGGTCAAAGGAAACTCTGGTGGAGACCCGTAGCGATACTGACATGCAAATCATTCATCTGACTTGGGAATAGGGGTGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCGAAAGTTTCCCTCTGGACAGCTGGAGCCCGTGAACGAGTTCTATCAAGTAAACCAATGATTAGAGGCATAGGGGGCGCAACGCCCTTGACCTATTCTCAGACGCTAGACA
AmTr_v1.0_scaffold00051	Ensembl_Plants	rRNA	1964232	1964386	.	+	.	ID=gene:ENSRNA049456308	Name=5_8S_rRNA	biotype=rRNA	description=5.8S ribosomal RNA	sequence=GACTCTCGACAACGAATATCTTGGCTCTTGCCACGATGAAGAACATAGCGAAATGCGATACCTGGTGTTAATTACAGAATCTCGTGAATCATCGAGTCTTTGAATGCAAGTTGCCCCCTAGGCCATAGGCTGAGGGCACGCCAGCCTGTGCGTCA	AmTr_v1.0_scaffold00051	Ensembl_Plants	MobileElement	1964234	1965078	3786	+	.	ID=123514	repeat_name=TXX_Gr_DX403825.1_7641	repeat_type=Unknown	sequence=TCTCGACAACGAATATCTTGGCTCTTGCCACGATGAAGAACATAGCGAAATGCGATACCTGGTGTTAATTACAGAATCTCGTGAATCATCGAGTCTTTGAATGCAAGTTGCCCCCTAGGCCATAGGCTGAGGGCACGCCAGCCTGTGCGTCATGCCAAATGTCGCCCCCTCCTCACCCTGTGCGCACCAGCGCAAGGGCTCGGGAAGGAAGATGGCCACCCGTTCCCCTCCCTTCACGTTGGTGGTGCAGTAGGCTCAAACCTAGGCCCACAGCATGCGAGTGACGCGACAATCGGTGGCCTCCACAGTGTGTCGCTATAACACCGCAGCTTAGGTTGGCACCCAGCAAACCCACGGACCCGCATTCCATGCAAAGATTCCGCACTGTGACCTCAGGTCAGATGGGGCCACCCACTGAGTTTAAGCATATCAATAAGCAGAGGAAAAGAAACTTATTAGGATTCCCCTAGTAACGGCTAGCAAACCGGGTACTGCCCAGCTTGGGAATCGGGCAGCCCCGCTGCTCGAATTGTAGTCTGTAGAAGCGTCCTCAGTGGCAAACTGGGCACAAGTCCCCTAAAAGGGGGCACTGGTTAGGGTGAGAGCCCTATCGTTCCTGGACCCTGCCGCACCACGAGGCGCTATTGGTGAGTCGGGTTGTTTGGGATGCAGCCCTAATTGGGTGGTAAATTATGTCCAACGCTAAATACCGGAGAGAGACTGATAGCGAACAATTACCGTGAGGGAAAGATGAAAAGGACTTTGAAAAGAGTCAAAGAGTGCTTGAAATTGTCAGGAGGGAAGCGGATGGGGCTGGCAGTGCCCCGCGGTCGGATGCAGGACG
AmTr_v1.0_scaffold00051	Ensembl_Plants	rRNA	1977219	1977373	.	+	.	ID=gene:ENSRNA049456291	Name=5_8S_rRNA	biotype=rRNA	description=5.8S ribosomal RNA	sequence=GACTCTCAACAACGGATATCTTGGCTCTCACCATGATGAAAAACATGGCGAAATGCGATACTTTGTGTGAATTGCCGAATCCCGTGAATCATCGAGTCTTTGAATGCAAGTTACGCCCAAGGGTGTAGGTTGAGGGCACGCCTGCCTGGGATGCA	AmTr_v1.0_scaffold00051	Ensembl_Plants	MobileElement	1977221	1978066	3707	+	.	ID=123513	repeat_name=TXX_Gr_DX403825.1_7641	repeat_type=Unknown	sequence=TCTCAACAACGGATATCTTGGCTCTCACCATGATGAAAAACATGGCGAAATGCGATACTTTGTGTGAATTGCCGAATCCCGTGAATCATCGAGTCTTTGAATGCAAGTTACGCCCAAGGGTGTAGGTTGAGGGCACGCCTGCCTGGGATGCATGCCAAACGCCGCCCCCTCCTCACCCCTGCGCTCACTAGTGCATGGGCTCAGGGCGCAAGATGGCCACCCGTTCCCCTCCCCTCACGTTGATGGTGCGGTAGGCTCAAACCCAAGACCACAGCTTGCAGGTGATGCGACAATCAGTGGCCTCCACAGTGTGTCGTTGTCGCAATGCGGCTTAGGTTGGTCCCCAGCAAACACACAGACTTGCGGTCCATGCAAAGATTCCTCACTGCGATCCTAGGTCAGGTGGGGCCACCCATTGAGTTTAAGCATATTAATAAGTGGAGGAAAAGAAACCTACCAAGATTCCACTAGTAACGGTGAACAAACCGGGAACTGCCCAGCGTGAGAATCAAGCGGCCCCACTGCTCGAATTGTAGTCTGTAGAAGCATCCTCAGCGGCGAACTGGGCATAAATCCCCTGGAACAGGGCGCCTGAGAGGGTGAGAGCCCTGTCATGCCCGGACCCTGCCGCACCACGAGGCGCTATGGCGAGTCGGGTTGTTTGGGAATGCAGCCCTATTTGGGCGGTAAATTCCGTTCAAGGCTAAATACCGACGAGAGAATAGAGAACAAGTGTCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAAAGTGCTTGAAATTGTTGGGAGGGAACCGGATGGGGGCTGGCAGTGCCCCGCGGTTGGATGCAAAACG
AmTr_v1.0_scaffold00051	Ensembl_Plants	rRNA	1988806	1988965	.	-	.	ID=gene:ENSRNA049456264	Name=SSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic small subunit ribosomal RNA	sequence=GGGGGCGGCATTTGGCTTGACAACCAGGTAGGCGTGCCCTGAATGAGACCTCAACCTATTAACTAGCTTCATGTATGTATCCTCCACGGCTAGCTTCTTAGAGGGACTATGACCATTTAGGCCATAGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT	AmTr_v1.0_scaffold00051	Ensembl_Plants	MobileElement	1988926	1989613	2576	+	.	ID=123512	repeat_name=TXX_Gr_DX403825.1_7641	repeat_type=Unknown	sequence=GGGCACGCCTACCTGGTTGTCAAGCCAAATGCCGCCCCCTCCTCACCCCTACGAGCACCAGTGCAAGGGCTCGGAGCACAAGATGGTCACCCGTTCCCCTCCCCTCTCGTTGGTGGTGCGGTAGGCTCAAACCCAAGCCCACAACATGCGAGTGATGCGACATCGGTGGCCTCCATAGTGTGTCGCATCGCACCGTGGCTTGGGTTGGCCCCCAGCAAACCCACAGACTCGCTTTTCGTGCAAAGACGCCGCACTACGACCCCAGGTCAGGCGGAGCCACCCGCTAAGTTTAAGCATATTAATAAGCGGAGGAAAAGAAGCTTACCAGGATTCCCCTAGTAACGGCGAGCGACCGGGAACTTCCCAGCATGGAAATCGAGCTGCCCCGCTGCGAAAATTGTAGTCTGTAGAAGTGTCCTCAGCTTTGGACTAGGCACAAGTCCCTTGGTGTGCCCGGACCTTGCCACACCACGAGGTGCTGTTGGCGAGTCGGGTTGTTTGGGAATGCAGCCCTAATTGGGCGGTAAATTATGTCCAAGGCTAAATACCAACGAGGGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTCAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCAGGAGGGAAGCGGATGGGGGCTGGCAGTACCCCGCTGTCGGATGCAGAATG
AmTr_v1.0_scaffold00056	Ensembl_Plants	rRNA	4098222	4098559	.	+	.	ID=gene:ENSRNA049456223	Name=LSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic large subunit ribosomal RNA	sequence=AGTGATGAGAATAAGCATATCGATAAGCAGAGGAGAAGATACTTGCTAGGATTCCCCTAGCATTGATGAGCAAAAAGGGTAGTGCCGAACATGGGAATCAAGTGGTCGAACTACCCAAATTGTAGTCTATAGAAACATCCTCAGCAGAGGACTTGGCACATATCCCTTGGTAGGGGGTTCTAGAGAGGGTGAGAGCCCTGTTGTACCTAGAGCCTGTCGCACTTCAAGACACACTATCGATTAGTCGGGTTGTTTGGGAACGAAGCCCTACTCATGTGCTAAATTTCGTCCAAGGCTAAATATTTGCAAGAGATAGCTAACGAGCAAGTACCTGATAG	AmTr_v1.0_scaffold00056	Ensembl_Plants	MobileElement	4098192	4098553	1518	+	.	ID=123517	repeat_name=TXX_Gr_DX403825.1_7641	repeat_type=Unknown	sequence=ACACTGCGATTCCAAGTCAGGCAGGGTTTAGTGATGAGAATAAGCATATCGATAAGCAGAGGAGAAGATACTTGCTAGGATTCCCCTAGCATTGATGAGCAAAAAGGGTAGTGCCGAACATGGGAATCAAGTGGTCGAACTACCCAAATTGTAGTCTATAGAAACATCCTCAGCAGAGGACTTGGCACATATCCCTTGGTAGGGGGTTCTAGAGAGGGTGAGAGCCCTGTTGTACCTAGAGCCTGTCGCACTTCAAGACACACTATCGATTAGTCGGGTTGTTTGGGAACGAAGCCCTACTCATGTGCTAAATTTCGTCCAAGGCTAAATATTTGCAAGAGATAGCTAACGAGCAAGTACC
AmTr_v1.0_scaffold00055	Ensembl_Plants	rRNA	1819242	1819702	.	-	.	ID=gene:ENSRNA049456043	Name=LSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic large subunit ribosomal RNA	sequence=TGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACTTCGGAAAAAGGATTGGCTCTGAGGGTTGGGCCCGAGGGTCCCCGCCCCAAACCCGTCGGCTGTTGGCGGACTGCTCGAGCAGCAAGAGCGGGTCACCGCGTGCCGGCCGGGGGACAGACGGGGAACGACCCCCCTTGGCGCCGTCCCCGGGCGTCGAATAGCCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTATTTAATTAAAACAAAGCATTGCGATGGTCCCTACGAATGTTGATGCAATGTGATTTTTGCCCAGTGCTGTGAATGTTAAAGTGAAGAAATTCATCCAAGCACGTGTAAACAACGGGAGTAACTATGACGCTCTTAAGGTAGTCAAATGCCTCGTCATTTAATTAATGACACGCATGAATGGATTAATGAGATTCCCACTGTCCCTGTCTACAAACTA	AmTr_v1.0_scaffold00055	Ensembl_Plants	LTR	1819248	1819702	3253	-	.	ID=10529	repeat_name=LTR_Al_scaffold_0183_279	repeat_type=LTRs	sequence=TGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACTTCGGAAAAAGGATTGGCTCTGAGGGTTGGGCCCGAGGGTCCCCGCCCCAAACCCGTCGGCTGTTGGCGGACTGCTCGAGCAGCAAGAGCGGGTCACCGCGTGCCGGCCGGGGGACAGACGGGGAACGACCCCCCTTGGCGCCGTCCCCGGGCGTCGAATAGCCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTATTTAATTAAAACAAAGCATTGCGATGGTCCCTACGAATGTTGATGCAATGTGATTTTTGCCCAGTGCTGTGAATGTTAAAGTGAAGAAATTCATCCAAGCACGTGTAAACAACGGGAGTAACTATGACGCTCTTAAGGTAGTCAAATGCCTCGTCATTTAATTAATGACACGCATGAATGGATTAATGAGATTCCCACTGTCCCTGTCTA
AmTr_v1.0_scaffold00107	Ensembl_Plants	rRNA	405581	405819	.	-	.	ID=gene:ENSRNA049455552	Name=SSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic small subunit ribosomal RNA	sequence=TAGCGAGTGGTTTGAGTTTTTCATTTATTTTTTAATTCCATGGGAAGTGGTGCATGGCCATTCATAGTTGGTGGGGTGGGGTGATTTGTTGCCTAATTCCATTAATGAATGAGACTTTCAGCCTGCTAACTAGCTTCGTGAGATATCCTCCACAACCAACTGCTTAGACAGAGCGACGAAGTATGGCTGTTTAGGTCAAGAATGTTTGAGGTGAAAACAGGTTTGTGATGCCCTTAGAT	AmTr_v1.0_scaffold00107	Ensembl_Plants	LTR/Gypsy	405268	405792	2406	-	.	ID=123528	repeat_name=LTR_Al_scaffold_0003_560	repeat_type=LTRs	sequence=TTTTTTAATTCCATGGGAAGTGGTGCATGGCCATTCATAGTTGGTGGGGTGGGGTGATTTGTTGCCTAATTCCATTAATGAATGAGACTTTCAGCCTGCTAACTAGCTTCGTGAGATATCCTCCACAACCAACTGCTTAGACAGAGCGACGAAGTATGGCTGTTTAGGTCAAGAATGTTTGAGGTGAAAACAGGTTTGTGATGCCCTTAGATATTCTTGGCCACACACATGCTTCACCAATGTATTCAACTGGAACAAAGCCTTGGCGGACCTGCCCTATAGTCTATTGATATTTAATCGTGATACCATAGAATAAATCATTGCAATTGTTGGTACTCAGTGCGGAATTCCCAATATGTGTGAGTCATCAGCTCATAGTGGCTAAGTCCCTACCCTTTGTACACACCAACCGTTGCTCTTATTGGTTGAATGGTTCGGTGAAGTTTTTGAATTGTGGCGATGGAGGTGTTCTGCCACTGGTGATGTTGCGGGAAGTCCATTGAACCTTTTTATTGAGAGGAAGG
AmTr_v1.0_scaffold00110	Ensembl_Plants	rRNA	358549	358667	.	+	.	ID=gene:ENSRNA049455531	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=CAGTATCATCCTAACGGTATTAATGCACCAAATCCCATCTGAACTCTCAAGTTAAACGTATTTGGGCACGAGTAGTATTAGTATGAGTGACTTCTTTGAAAGTCCTTGTACCACACCTT	AmTr_v1.0_scaffold00110	Ensembl_Plants	nonLTR	358556	358725	609	+	.	ID=133460	repeat_name=RXX_Gk_DX402720.1_7357	repeat_type=Unknown	sequence=TCCTAACGGTATTAATGCACCAAATCCCATCTGAACTCTCAAGTTAAACGTATTTGGGCACGAGTAGTATTAGTATGAGTGACTTCTTTGAAAGTCCTTGTACCACACCTTTTTTTTTTATTATCATTATTATTGATTTCTATTTGGGAATAAGTTTGGCATTATGTGA
AmTr_v1.0_scaffold00059	Ensembl_Plants	rRNA	1350560	1350679	.	+	.	ID=gene:ENSRNA049455103	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGGTGCGGTCATACCAGCACGAATGCACCGGAATCCCATCAGAACTCCGAAGTTAAGCGTGCTTGGGCAAGAGTAGTACTAGGATGGGTGACCTCTTGGGAAGTCTTTGTGTCGCACCCC	AmTr_v1.0_scaffold00059	Ensembl_Plants	nonLTR	1350560	1350687	945	+	.	ID=133451	repeat_name=RXX_Gk_DX402720.1_7357	repeat_type=Unknown	sequence=GGTGCGGTCATACCAGCACGAATGCACCGGAATCCCATCAGAACTCCGAAGTTAAGCGTGCTTGGGCAAGAGTAGTACTAGGATGGGTGACCTCTTGGGAAGTCTTTGTGTCGCACCCCTTTTTGTT
AmTr_v1.0_scaffold00070	Ensembl_Plants	rRNA	542228	542382	.	+	.	ID=gene:ENSRNA049454670	Name=5_8S_rRNA	biotype=rRNA	description=5.8S ribosomal RNA	sequence=GACTCTCGACAACGGATATCTTGGCTCTTGCCACGATGAAGAACATAGCGAAATGTGATACTTTGTGTGAATTGCATAATCCTGTGAATCATCGAGTCTTTGAATGCAAGTTGCACCTGAGGCCGTAGGCTGAGGGCACGCCTGTCTGAATATCA	AmTr_v1.0_scaffold00070	Ensembl_Plants	LTR/Gypsy	542099	542382	974	+	.	ID=123531	repeat_name=LTR_Al_scaffold_0003_560	repeat_type=LTRs	sequence=ACACAAAACCCCGGCAAGTCAAGCGTTAAGGAAATGAATCACATCGGAATGTGGGGGGGCACCACGTAGGCGGGTGCTCGGTCCCCTTGTGGTGTGCCCCATCGCTCCGATCGCATATTGTCAAACACGACTCTCGACAACGGATATCTTGGCTCTTGCCACGATGAAGAACATAGCGAAATGTGATACTTTGTGTGAATTGCATAATCCTGTGAATCATCGAGTCTTTGAATGCAAGTTGCACCTGAGGCCGTAGGCTGAGGGCACGCCTGTCTGAATATCA
AmTr_v1.0_scaffold04055	Ensembl_Plants	rRNA	1457	1583	.	-	.	ID=gene:ENSRNA049461231	Name=SSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic small subunit ribosomal RNA	sequence=AAGTTTGGAGGCTTGAAGACGATCAGATACCGTCTTAGTCTCAACCATAAACGATGACGACCTGGGATCGGCGGATGTTGCTCTTAGGACTCCGTTGGCACCTTATGCGAAATCAAAGCCTTTGGAT	AmTr_v1.0_scaffold04055	Ensembl_Plants	LTR/Copia	1451	1579	986	-	.	ID=146781	repeat_name=RLC_Gk_DX402782.1_7369	repeat_type=LTRs	sequence=TTGGAGGCTTGAAGACGATCAGATACCGTCTTAGTCTCAACCATAAACGATGACGACCTGGGATCGGCGGATGTTGCTCTTAGGACTCCGTTGGCACCTTATGCGAAATCAAAGCCTTTGGATTCCAA
AmTr_v1.0_scaffold03506	Ensembl_Plants	rRNA	339	455	.	+	.	ID=gene:ENSRNA049460939	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=TCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAACTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTGCGGAAAAATAGCTCGACGCCAGGA	AmTr_v1.0_scaffold03506	Ensembl_Plants	LTR/Gypsy	311	536	1408	-	.	ID=150997	repeat_name=sabrina_115G1-1	repeat_type=LTRs	sequence=GACCCTTTCATTTTTCATTTTTTTCTTTTTCATAGTTAAAAAAGAAAGTAATAAGAATGAGAGGTGTTAACCTTTTTATCATCCTGGCGTCGAGCTATTTTTCCGCAGGACCTCCCCTACAGTATCGTCACCGCAGTAGAGTTTAACCACCAAGTTCGGGATGGATTGGTGTGGTTCCTCTACGCCTAGGACACCAGAATATCGAACCATGAACGAAGAAAGGCA
AmTr_v1.0_scaffold00097	Ensembl_Plants	rRNA	46786	47214	.	-	.	ID=gene:ENSRNA049459741	Name=LSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic large subunit ribosomal RNA	sequence=GGTAGTAGCAAATATTCAAATGAGAACTTTGTAGGTCGAAGTGGGGAAAGGTTCCTTGTGAACGACACTTGCACATGGGTTAGTTGATCCTAAGAGTCGGGGAAAGCCCGTCCGAGAGCGCTGCTAGCGCGAGCTTCGAAAGGGAATCGGGTTAAAATTCTTGAACCGGGACGTGGCGGCGGACGGCAACGTTAGGGAGTCCGAAGACATCGTCGGGGGCCTCGAGAAGAGTTATCGTTTCTTTTTAACAGCCTGCCCACCTGGAAACGGCTCAGCCGGAGGTAGCGTTCAACGGCTGGAAGAGCAGTGCACGTCGCGTGGTGTCTGGTGCGCCCCCGGCGGCCCGTGAAAATTCTGAGAACCGAGTGCCACCCACTCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTC	AmTr_v1.0_scaffold00097	Ensembl_Plants	LTR/Gypsy	45258	47273	13441	-	.	ID=123526	repeat_name=LTR_Al_scaffold_0003_560	repeat_type=LTRs	sequence=GTCGCTGCGAAACCTGGGGCGCGAGCCCGAGCGGAGCGGCCGTTGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGTAGGTCGAAGTGGGGAAAGGTTCCTTGTGAACGACACTTGCACATGGGTTAGTTGATCCTAAGAGTCGGGGAAAGCCCGTCCGAGAGCGCTGCTAGCGCGAGCTTCGAAAGGGAATCGGGTTAAAATTCTTGAACCGGGACGTGGCGGCGGACGGCAACGTTAGGGAGTCCGAAGACATCGTCGGGGGCCTCGAGAAGAGTTATCGTTTCTTTTTAACAGCCTGCCCACCTGGAAACGGCTCAGCCGGAGGTAGCGTTCAACGGCTGGAAGAGCAGTGCACGTCGCGTGGTGTCTGGTGCGCCCCCGGCGGCCCGTGAAAATTCTGAGAACCGAGTGCCACCCACTCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGGGAGTCGGCAAAATGGATCCGTAACTTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCCCAGGGGTCCCCGCCTCGAACCTGTCGGTTGTCGACAGACTGCTCGAGTTGCTCCCACGGCGAGAGCGGGTCACCGCGTGCCGGCTGGGGGACAGACGGGGAACGACCCCCCTGGGGGCCTTCCCTGGGCGTCGAACAGCCGACTCAGAATTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTACGATGGTCTCTGCGGATGCTCACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGAGCGGGTAAATGGTGGGAGTAACTATGACTCTTTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGATGCGCATGAATGGATTTACGAGATTCCCATTGTCCCATTCTATTATCTAGCGAAACCACAGTCAAGGGAATGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCTGCCCCCTGTGGCGCAAGTGAAATACCACTGCTTTTAACATTATTTTACTTATTCCGTGAGTTGGAGGTGGGGCATTGCCCCTCGTTTTGGCTCCAAGGCTCGCCCTAGGCGGGCCGATCCGTGCGGAAGACATTGTCAAGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAATGCAGGTGTCCTAAGATGAGCTCAACGAGAACATAAATCTCGTGTGGAACAAAAGGGTAAAAGCCTGTTTAATTCTGATTTCTAGTACGAATACGAACCGTTAAAGCGTGGCCTATCGATCCTTTAGACCTTTGGGATTTGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGACTTGTGGCAGCCAAGCGTTCATAGCGATGTTGCTTTTTGATCCTTCAATATCGGCTCTTCATATCATTGTGAAGCAGAATTCAGCAAGTGTTGGATTGTTCACCCACCAATAAGAAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGAGCGTGCCACGATAGTAATTCAACTTAGTACGAGAGGAACCGTTGATTCACACAAATGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTGCCGTGTGCCGGATTATGACTGAACGCCTCTAAGTTAGAATCCAAGCTAGGAAGCGACGCTTGTCCCCTCTGCCCATTTGCCGACCCACAGTAAAGCTGCGCTCATGCACCCCAGGGGCTCGTGTCATTGGTGAAGCCCCCCACAGTGGATGCTCTGTGGGGGACTGCCTTGCAATGAAATTCTCATCGGGCGGTAGGCAGAATCCTTTACAGACGACTTAAATATGCGACGGGGTATTGTAAGTGGCAGAGTGCCCTTGCTACCACGATCCACTAAGATTCAGCCCTGTGTCGCAATGATTCGTCCCTC
AmTr_v1.0_scaffold00097	Ensembl_Plants	rRNA	11180	12342	.	-	.	ID=gene:ENSRNA049459707	Name=SSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic small subunit ribosomal RNA	sequence=TACCTGGTTGATCTTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCAAGTGTAAGTATGAACTAATTAAGACTGTTAAACTGCCTCCGACACCGTTACTTTGAAGAAATTAGAGTGCTCAAAACAAGCCTACGCTCTGAATACATTAGCATGGGATAACATCACAGGATTTCGGTCCTATTGTGTTGGCCTTCGAGATCGGATTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTTGATTTATGAAAGACCAACCACTGCGAAAGCACTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGGTGGGGGCTCGAAGACGATCAGATACCGTTCTAGTCTCAACCAAAGACGATGCCGACCATGGATCAACGAATGTTGCTCTTAGGACTTTGTCGGCACCTTATGAGAAATTAAAGTCTTTGGGTACCGGGGGGAGTATGGTCGCAAGGCAGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACATGGGGAAACTTACCAGGTCCAGACATAGTAAGGATTGACAAACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCTGTTCTTTGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACAAGCTATGTGGAGGTATCCTCCACGGCCAGCTTCTTAGAGGGACTATGGCCGTTTAGGCCACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTTTGGGCCGCACGCGCGCCACACTGATGTATTCAACGAGTATATAGCCTTGGCCGACAGGCCCTGGTAATCTATTGAAATTTCAGCATGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAAGTCCTAGTAAGCGCGAGTCATCAGCTCGTGTTGACTACGTCCTTGCCCTTTGTACACACTGCCCATCGCTCCTACCTATTGAATGGTTCGGTTAAGTGTTCGGATCGCGACGACGAAAGCGGTCCGCCATTGACGACGTCGCGAGAAGTCCACTGAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTG	AmTr_v1.0_scaffold00097	Ensembl_Plants	MobileElement	12252	12343	660	-	.	ID=149717	repeat_name=TXX_Ge_DX391571.1_908	repeat_type=Unknown	sequence=CTACCTGGTTGATCTTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCAAGTGTAAGTATGAACTAATTAAGACTGTTAAACTG
AmTr_v1.0_scaffold00097	Ensembl_Plants	rRNA	45266	46785	.	-	.	ID=gene:ENSRNA049459688	Name=LSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic large subunit ribosomal RNA	sequence=GATGGAACAATGTAGGCAAGGGGAGTCGGCAAAATGGATCCGTAACTTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCCCAGGGGTCCCCGCCTCGAACCTGTCGGTTGTCGACAGACTGCTCGAGTTGCTCCCACGGCGAGAGCGGGTCACCGCGTGCCGGCTGGGGGACAGACGGGGAACGACCCCCCTGGGGGCCTTCCCTGGGCGTCGAACAGCCGACTCAGAATTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTACGATGGTCTCTGCGGATGCTCACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGAGCGGGTAAATGGTGGGAGTAACTATGACTCTTTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGATGCGCATGAATGGATTTACGAGATTCCCATTGTCCCATTCTATTATCTAGCGAAACCACAGTCAAGGGAATGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCTGCCCCCTGTGGCGCAAGTGAAATACCACTGCTTTTAACATTATTTTACTTATTCCGTGAGTTGGAGGTGGGGCATTGCCCCTCGTTTTGGCTCCAAGGCTCGCCCTAGGCGGGCCGATCCGTGCGGAAGACATTGTCAAGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAATGCAGGTGTCCTAAGATGAGCTCAACGAGAACATAAATCTCGTGTGGAACAAAAGGGTAAAAGCCTGTTTAATTCTGATTTCTAGTACGAATACGAACCGTTAAAGCGTGGCCTATCGATCCTTTAGACCTTTGGGATTTGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGACTTGTGGCAGCCAAGCGTTCATAGCGATGTTGCTTTTTGATCCTTCAATATCGGCTCTTCATATCATTGTGAAGCAGAATTCAGCAAGTGTTGGATTGTTCACCCACCAATAAGAAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGAGCGTGCCACGATAGTAATTCAACTTAGTACGAGAGGAACCGTTGATTCACACAAATGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTGCCGTGTGCCGGATTATGACTGAACGCCTCTAAGTTAGAATCCAAGCTAGGAAGCGACGCTTGTCCCCTCTGCCCATTTGCCGACCCACAGTAAAGCTGCGCTCATGCACCCCAGGGGCTCGTGTCATTGGTGAAGCCCCCCACAGTGGATGCTCTGTGGGGGACTGCCTTGCAATGAAATTCTCATCGGGCGGTAGGCAGAATCCTTTACAGACGACTTAAATATGCGACGGGGTATTGTAAGTGGCAGAGTGCCCTTGCTACCACGATCCACTAAGATTCAGCCCTGTGTCGCAATGATTC	AmTr_v1.0_scaffold00097	Ensembl_Plants	LTR/Gypsy	45258	47273	13441	-	.	ID=123526	repeat_name=LTR_Al_scaffold_0003_560	repeat_type=LTRs	sequence=GTCGCTGCGAAACCTGGGGCGCGAGCCCGAGCGGAGCGGCCGTTGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGTAGGTCGAAGTGGGGAAAGGTTCCTTGTGAACGACACTTGCACATGGGTTAGTTGATCCTAAGAGTCGGGGAAAGCCCGTCCGAGAGCGCTGCTAGCGCGAGCTTCGAAAGGGAATCGGGTTAAAATTCTTGAACCGGGACGTGGCGGCGGACGGCAACGTTAGGGAGTCCGAAGACATCGTCGGGGGCCTCGAGAAGAGTTATCGTTTCTTTTTAACAGCCTGCCCACCTGGAAACGGCTCAGCCGGAGGTAGCGTTCAACGGCTGGAAGAGCAGTGCACGTCGCGTGGTGTCTGGTGCGCCCCCGGCGGCCCGTGAAAATTCTGAGAACCGAGTGCCACCCACTCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGGGAGTCGGCAAAATGGATCCGTAACTTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCCCAGGGGTCCCCGCCTCGAACCTGTCGGTTGTCGACAGACTGCTCGAGTTGCTCCCACGGCGAGAGCGGGTCACCGCGTGCCGGCTGGGGGACAGACGGGGAACGACCCCCCTGGGGGCCTTCCCTGGGCGTCGAACAGCCGACTCAGAATTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTACGATGGTCTCTGCGGATGCTCACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGAGCGGGTAAATGGTGGGAGTAACTATGACTCTTTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGATGCGCATGAATGGATTTACGAGATTCCCATTGTCCCATTCTATTATCTAGCGAAACCACAGTCAAGGGAATGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCTGCCCCCTGTGGCGCAAGTGAAATACCACTGCTTTTAACATTATTTTACTTATTCCGTGAGTTGGAGGTGGGGCATTGCCCCTCGTTTTGGCTCCAAGGCTCGCCCTAGGCGGGCCGATCCGTGCGGAAGACATTGTCAAGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAATGCAGGTGTCCTAAGATGAGCTCAACGAGAACATAAATCTCGTGTGGAACAAAAGGGTAAAAGCCTGTTTAATTCTGATTTCTAGTACGAATACGAACCGTTAAAGCGTGGCCTATCGATCCTTTAGACCTTTGGGATTTGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGACTTGTGGCAGCCAAGCGTTCATAGCGATGTTGCTTTTTGATCCTTCAATATCGGCTCTTCATATCATTGTGAAGCAGAATTCAGCAAGTGTTGGATTGTTCACCCACCAATAAGAAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGAGCGTGCCACGATAGTAATTCAACTTAGTACGAGAGGAACCGTTGATTCACACAAATGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTGCCGTGTGCCGGATTATGACTGAACGCCTCTAAGTTAGAATCCAAGCTAGGAAGCGACGCTTGTCCCCTCTGCCCATTTGCCGACCCACAGTAAAGCTGCGCTCATGCACCCCAGGGGCTCGTGTCATTGGTGAAGCCCCCCACAGTGGATGCTCTGTGGGGGACTGCCTTGCAATGAAATTCTCATCGGGCGGTAGGCAGAATCCTTTACAGACGACTTAAATATGCGACGGGGTATTGTAAGTGGCAGAGTGCCCTTGCTACCACGATCCACTAAGATTCAGCCCTGTGTCGCAATGATTCGTCCCTC
AmTr_v1.0_scaffold00191	Ensembl_Plants	rRNA	318790	319219	.	+	.	ID=gene:ENSRNA049459378	Name=LSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic large subunit ribosomal RNA	sequence=GATAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGTGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTTGATCTTAAGAGTGGGGAGTAGCCTGTCCGAGAGCGCTGCTAGCGCAAGCTTCGAAAGGGAATCTGGTTAAAATTCCTGAACCGGGACGTGGCGGTGGACGACAACGTTAGGGAGTCCGGAGACGTCTTCGGGGGCCTCGGGAAGAGTTATCTCTTCTGTTTAACAGCCTGCCCACCCTGGAAACAGCTCAGCTGGAGGTAGGGTCCAACGGCTGGAAGAGCACCGCACGTCCAGTGGTGTTCGATGTGCCCCCGATGGCTCGTGAAAATCCAGAGGAGAGAGTGCCGCCCACGCCCGATCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAACCTCTGGTC	AmTr_v1.0_scaffold00191	Ensembl_Plants	LTR/Gypsy	318474	320747	14837	+	.	ID=123529	repeat_name=LTR_Al_scaffold_0003_560	repeat_type=LTRs	sequence=TTGATGAGCAGAACTGGCGATGTGGGATGAACCAGAAGCCAGGTTACGGTGCCGAACTGCGCGTTAACCCAGAACAAAGGGTGTTGGCCGATTAAGACAGTAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTTCCGAATCAACTAGCCCAAAAAATGGATGGCGCTGAAGCGCGAGACCCACACCCGGCCGTCAGCACTATTGCCAAGCCTCGATGAGTAGGAGGGTGCGATGGTTGCTGTGAAACCTGGGGCACGAGCCCGAGCGAAGCGGCCATTAGTGCAGATCTTGGTGATAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGTGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTTGATCTTAAGAGTGGGGAGTAGCCTGTCCGAGAGCGCTGCTAGCGCAAGCTTCGAAAGGGAATCTGGTTAAAATTCCTGAACCGGGACGTGGCGGTGGACGACAACGTTAGGGAGTCCGGAGACGTCTTCGGGGGCCTCGGGAAGAGTTATCTCTTCTGTTTAACAGCCTGCCCACCCTGGAAACAGCTCAGCTGGAGGTAGGGTCCAACGGCTGGAAGAGCACCGCACGTCCAGTGGTGTTCGATGTGCCCCCGATGGCTCGTGAAAATCCAGAGGAGAGAGTGCCGCCCACGCCCGATCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAACCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACTTAGGGAAAAGGATTGGCTCTGAGGGCTGGGCCCGAGGGTCCCCGCCCTGAACCCGTCGGCTGTCGGCGGACTGCTCGAGCTGCTCCTGCGGTGAGAGCAGGTCATCGCTTGCAGGCCGGGGGATAGACGGGGAACGGCCCCCCTGGGGGCCTTTCCCGAGCATCGAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCAATGCGATGGTCCCTGCGGATGTTGACGCAATGTGATTTCTGCCCAGTGCTCTGCATGTCAAAGTGAAGAAATTCAACCAAGTGCGGGTAAACGACGGGAGTAACTCTGACTCTCTTAAGGTAGGCAAATGCCTCGTCATCTAATTAGTGATGCACATGATTGGATTAACGAGATTCCCATTGTCCCTATCTACTATCCAGCGAAACCACAACCAAGGGAACGGTCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCGCCCCCGGTGGAGCAAGTGAAATAACACTACTTTTAACGTTATTTTACTTATTCCGTGAGTCGGTGGCAGGGCATTGCCCCTCGTTTTGGCTCCAAGGCTAGTCCTAGGCGGGCTGATCCGAGCGGAAGACATTGTCAGGTTGGGAGTTTGGCTAGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGGTCAACGAGATTAGAAATCTCGTGTGGAACAAAAGGGTAAAAGTTCGTTGGATTCTGATTTTGAGTACGAATACAAACCGTGAAAGCGTGGCCAATCGATCCTTTAGACCTTTGGGATTTGAAGTTAGATGTGTCCGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCAATGTCGGCTCTACCTCCTCTTCTTTCTTTAATTCGCCAAGTGTTGGATTGTTCACCCACTAATAGGGAACGTAAGCTGGGATTAGACCATCATGTGACAGGTTAGTTTTACCCTACAGATGAGCGTGCTGCGATAGTAATTCAACTTAGTACGAGAGGAACCATTGATTCAAACAAATGGTCATCGCACTTGGTTGAAAAGCTAGTGGCGCGAAGCTACCGTGTGCCGGATTATGACTGAAAGCCTCTAAGTCAGAATCCAAGCTAGGAAGCGGTGCCTGTCCCCTCTGCCCGTTTGCCGACCCACAGTAGGGTTGCGCTCGCACACGCCAGGGGCTCGTGTCGTTGGTGAAGGCCACCACAGTGGATGCACTGTGGGGGATTTCCTTGCAATGTAATACCCGTTGGGCGGTAGGCAGAATCCTTTGCAGACGACTTAAATATGCGACGGGATAATGTAAGTGGCAGAGTGGCCTTGCTGTCACGATCCACTGAGATTCAGCCCTGTGTCGTAACGATTCGTCCCCCCC
AmTr_v1.0_scaffold00028	Ensembl_Plants	rRNA	1392144	1392498	.	+	.	ID=gene:ENSRNA049458946	Name=SSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic small subunit ribosomal RNA	sequence=GTGTAAGTATGAACTAATTCTGACTGTGAAATTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTACCTGCTACTTGGATAACAGTGGTAATTCTAGAGCTAATACGTGCAAGAAATCCCGACCTCTAGAAGGGATGCATTTATTAGATAAAAGGCTAGTCATATTCATAAGGCCCACATTAGAGGTTGTTATTCGCAGGGAAATATTATAGGATTTGGTGTGCACTTGCGCCGCTGGTAGCGGCACGATGCACATGTCGGGTTTTGGTTCAAGAACGATGTGATCCCGCGGTCCCTATGGATTAATCTCTAAGTTAATATTGGTCACCATAGACTCAGATTATGAG	AmTr_v1.0_scaffold00028	Ensembl_Plants	MobileElement	1392069	1392306	1704	+	.	ID=147978	repeat_name=TXX_Ge_DX392935.1_2272	repeat_type=Unknown	sequence=CCATGTCGTTGTGGGATGCTACTAGGCTGATCTGTTAGTAGTCATATGCTTCTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACTAATTCTGACTGTGAAATTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTACCTGCTACTTGGATAACAGTGGTAATTCTAGAGCTAATACGTGCAAGAAATCCCGACCTCTAGAAGGGATGCATTTATTAGATAAAAGG
AmTr_v1.0_scaffold00014	Ensembl_Plants	rRNA	5818362	5818662	.	+	.	ID=gene:ENSRNA049454322	Name=SSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic small subunit ribosomal RNA	sequence=GGAGCCTGTGGCTTAATTTCACTCAACACGGGGAAACTGACCAGGTCCAGACATAGTAAAGATTGACATACTGAAAGTGCTTTCTTGTTTCTATGGGTGGCGTTGATGATTTCTCTTATTTGGTAGAGCAATTCGTCTAGTTAATCCCATTAATGAACAAGACCTCAGCTTGCTAAGTAGCTACATAGAGGCATCCTCCACTGTCAGCTTCTTAGAAGGACTAGGCCATTTAGGCCACGAAAGTTTAGGCAATAACAGACCTATGATGCCCAAAGATAAAGTAGGGCCGCATGCATGCTAC	AmTr_v1.0_scaffold00014	Ensembl_Plants	MobileElement	5818216	5818697	2593	+	.	ID=152517	repeat_name=TXX_Gk_DX403742.1_7616	repeat_type=Unknown	sequence=TAAATTATGCTGACCAAGGATTAGTGGATGGTGCTTTCAGGAATCCATCGGCACTTTATTGGAAATCAAAGGCTTAGGGTTCTGAGGGGAGTATGGTCGTGAGGTTCAAATTTAAAGGAATTGATGGAAGGGCACTACCAGGAGTGGAGCCTGTGGCTTAATTTCACTCAACACGGGGAAACTGACCAGGTCCAGACATAGTAAAGATTGACATACTGAAAGTGCTTTCTTGTTTCTATGGGTGGCGTTGATGATTTCTCTTATTTGGTAGAGCAATTCGTCTAGTTAATCCCATTAATGAACAAGACCTCAGCTTGCTAAGTAGCTACATAGAGGCATCCTCCACTGTCAGCTTCTTAGAAGGACTAGGCCATTTAGGCCACGAAAGTTTAGGCAATAACAGACCTATGATGCCCAAAGATAAAGTAGGGCCGCATGCATGCTACACCTATGTATTCAAATAAAAATAGCCCTGCCGACA
AmTr_v1.0_scaffold00001	Ensembl_Plants	rRNA	10889858	10890101	.	-	.	ID=gene:ENSRNA049453639	Name=LSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic large subunit ribosomal RNA	sequence=AACTGGGAACCGACCAGCATGAGAATCGGGCGACCCTATAGAAGCATCCTCAATGGATGACTGGGCACAAGTCCCCTGGAACGGGTGCTGAAGAGGGCGAGCGCCCTGTCGTGCTCGGACCTTGCCGCACTACAAAGCACTGTCGGCAAGTCGGGTTGTTTGGAAATGTAGCCCTAATTGGGCGGTAAATTCCATCCAAAGTTAAACACTGGCTAGAGACCGATAGCAAACAAGCGACCCCAGG	AmTr_v1.0_scaffold00001	Ensembl_Plants	LTR	10889808	10889870	418	-	.	ID=123535	repeat_name=LTR_Al_scaffold_0003_561	repeat_type=LTRs	sequence=AAGCGACCCCAGGTCAAGCATGGCCACCCGCTGAGTTTAAGCATATTAATAAGCGAAGAAAA
AmTr_v1.0_scaffold00068	Ensembl_Plants	rRNA	168578	168699	.	-	.	ID=gene:ENSRNA049453559	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GAAAACCATCAAACAGGCACTAATGCTCAGGATCTCATCAAAACTCCACAGCTTAGAGTGCCTATGTAAGAACAACAGTACTAGGATGGAGGACCTCTTAGGAAGCCCGTTTATCATACTCG	AmTr_v1.0_scaffold00068	Ensembl_Plants	nonLTR	168592	168692	451	-	.	ID=133463	repeat_name=RXX_Gk_DX402720.1_7357	repeat_type=Unknown	sequence=ATCAAACAGGCACTAATGCTCAGGATCTCATCAAAACTCCACAGCTTAGAGTGCCTATGTAAGAACAACAGTACTAGGATGGAGGACCTCTTAGGAAGCC
AmTr_v1.0_scaffold00124	Ensembl_Plants	rRNA	1579866	1580017	.	-	.	ID=gene:ENSRNA049453344	Name=5_8S_rRNA	biotype=rRNA	description=5.8S ribosomal RNA	sequence=TATATTCGCATATGTATATAGCTCTCGCCACGATGAAGAATGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAATCATTGAGTCTTTGAACGCAACTTGCACCCGAGGTCGTAGGTTGAGGGCACGCCTGCCTGGGTGTCA	AmTr_v1.0_scaffold00124	Ensembl_Plants	LTR/Gypsy	1579998	1580070	536	-	.	ID=67250	repeat_name=LTR_Os_chr_08_1545	repeat_type=LTRs	sequence=TTTGATGAATATCAAGATCTAGTCCTAGTTACACATATACATACATACATGCATATATTCGCATATGTATAT
AmTr_v1.0_scaffold00029	Ensembl_Plants	tRNA	549184	549255	.	+	.	ID=gene:ENSRNA049438079	Name=tRNA-Asp	biotype=tRNA	description=tRNA-Asp for anticodon GUC	sequence=GTCGTTGTAGTATAGTGGTAAGTATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCCCCGGCAGCGGCG	AmTr_v1.0_scaffold00029	Ensembl_Plants	LTR	549183	549255	564	-	.	ID=969	repeat_name=LTR_Gr_chr_11_2758	repeat_type=LTRs	sequence=CGCCGCTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATACTTACCACTATACTACAACGAC
AmTr_v1.0_scaffold00030	Ensembl_Plants	tRNA	1310738	1310810	.	+	.	ID=gene:ENSRNA049438620	Name=tRNA-Phe	biotype=tRNA	description=tRNA-Phe for anticodon GAA	sequence=GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCA	AmTr_v1.0_scaffold00030	Ensembl_Plants	LTR	1310738	1310810	639	+	.	ID=945	repeat_name=LTR_Mt_chr_05_582	repeat_type=LTRs	sequence=CGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCA
AmTr_v1.0_scaffold00032	Ensembl_Plants	tRNA	2012178	2012259	.	-	.	ID=gene:ENSRNA049440718	Name=tRNA-Ser	biotype=tRNA	description=tRNA-Ser for anticodon AGA	sequence=GTGGACGTGCCGGAGTGGTTATCGGGCATGACTAGAAATCATGTGGGCTCTGCCCGCGCAGGTTCGAATCCTGCCGTTCACG	AmTr_v1.0_scaffold00032	Ensembl_Plants	LTR	2012177	2012259	705	+	.	ID=130499	repeat_name=LTR_Al_scaffold_0001_223	repeat_type=LTRs	sequence=CGTGAACGGCAGGATTCGAACCTGCGCGGGCAGAGCCCACATGATTTCTAGTCATGCCCGATAACCACTCCGGCACGTCCAC
AmTr_v1.0_scaffold00032	Ensembl_Plants	tRNA	2915183	2915255	.	-	.	ID=gene:ENSRNA049440750	Name=tRNA-Phe	biotype=tRNA	description=tRNA-Phe for anticodon GAA	sequence=GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCA	AmTr_v1.0_scaffold00032	Ensembl_Plants	LTR	2915168	2915255	707	-	.	ID=919	repeat_name=LTR_Mt_chr_05_582	repeat_type=LTRs	sequence=GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCATTTGTTTTTTATTG
AmTr_v1.0_scaffold00032	Ensembl_Plants	tRNA	2181058	2181130	.	+	.	ID=gene:ENSRNA049440791	Name=tRNA-Phe	biotype=tRNA	description=tRNA-Phe for anticodon GAA	sequence=GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCA	AmTr_v1.0_scaffold00032	Ensembl_Plants	LTR	2181017	2181137	787	+	.	ID=917	repeat_name=LTR_Mt_chr_05_582	repeat_type=LTRs	sequence=TTAGAATATTTAATATTTAATAGCTTACACGTACAGAATTGCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCATTTTTTA
AmTr_v1.0_scaffold00032	Ensembl_Plants	tRNA	2172800	2172872	.	+	.	ID=gene:ENSRNA049440807	Name=tRNA-Phe	biotype=tRNA	description=tRNA-Phe for anticodon GAA	sequence=GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCA	AmTr_v1.0_scaffold00032	Ensembl_Plants	LTR	2172754	2172879	784	+	.	ID=915	repeat_name=LTR_Mt_chr_05_582	repeat_type=LTRs	sequence=TTTTTTTAGAATAGTTAATATTTAATAGCTTACACGTACAGAAATGCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCATTTTTTA
AmTr_v1.0_scaffold00032	Ensembl_Plants	tRNA	1101587	1101659	.	+	.	ID=gene:ENSRNA049440829	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon UUU	sequence=GCCGTCTTAGCTCAGCTGGTAGAGCGCGTGGCTTTTAACCACGTGGTCGTGGGTTCGATTCCCACAGACGGCG	AmTr_v1.0_scaffold00032	Ensembl_Plants	LTR	1101587	1101659	630	-	.	ID=128162	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=CGCCGTCTGTGGGAATCGAACCCACGACCACGTGGTTAAAAGCCACGCGCTCTACCAGCTGAGCTAAGACGG
AmTr_v1.0_scaffold00032	Ensembl_Plants	tRNA	565775	565846	.	+	.	ID=gene:ENSRNA049440839	Name=tRNA-Asp	biotype=tRNA	description=tRNA-Asp for anticodon GUC	sequence=GTCGTTGTAGTATAGTGGTGAGTATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCCCCGGCAGCGGCG	AmTr_v1.0_scaffold00032	Ensembl_Plants	LTR	565764	565847	541	-	.	ID=973	repeat_name=LTR_Gr_chr_11_2758	repeat_type=LTRs	sequence=GCGCCGCTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATACTCACCACTATACTACAACGACCTGACGAGAA
AmTr_v1.0_scaffold00025	Ensembl_Plants	tRNA	5917642	5917714	.	-	.	ID=gene:ENSRNA049436308	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon CUU	sequence=GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCG	AmTr_v1.0_scaffold00025	Ensembl_Plants	LTR	5917642	5917715	560	-	.	ID=135949	repeat_name=LTR_AC183412.5_672	repeat_type=LTRs	sequence=AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGC
AmTr_v1.0_scaffold00024	Ensembl_Plants	tRNA	4334845	4334934	.	-	.	ID=gene:ENSRNA049440892	Name=tRNA-Tyr	biotype=tRNA	description=tRNA-Tyr for anticodon GUA	sequence=CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGTGGGTTGTCCTCAGATCATCCTTAGGTCGCTGGTTCGAATCCGGCAGGTCGGA	AmTr_v1.0_scaffold00024	Ensembl_Plants	LTR	4334814	4334935	521	+	.	ID=130512	repeat_name=LTR_Al_scaffold_0001_223	repeat_type=LTRs	sequence=AAAAATAAACACCGTATATCAAATGAATGATCCGACCTGCCGGATTCGAACCAGCGACCTAAGGATGATCTGAGGACAACCCACTACAGTCCTCCGCTCTACCAACTGAGCTAAGGTCGGT
AmTr_v1.0_scaffold00019	Ensembl_Plants	tRNA	6862441	6862522	.	+	.	ID=gene:ENSRNA049435785	Name=tRNA-Ser	biotype=tRNA	description=tRNA-Ser for anticodon UGA	sequence=GTCGATATGTCCGAGTGGTTAAGGAGACAGACTTGAAATCTGTTGGGCTTCGCCCGCGCAGGTTCGAACCCTGCTGTCGACG	AmTr_v1.0_scaffold00019	Ensembl_Plants	LTR	6862441	6862538	393	-	.	ID=130505	repeat_name=LTR_Al_scaffold_0001_223	repeat_type=LTRs	sequence=AATATAATAATAAAAACGTCGACAGCAGGGTTCGAACCTGCGCGGGCGAAGCCCAACAGATTTCAAGTCTGTCTCCTTAACCACTCGGACATATCGA
AmTr_v1.0_scaffold00016	Ensembl_Plants	tRNA	5520924	5521005	.	+	.	ID=gene:ENSRNA049439415	Name=tRNA-Ser	biotype=tRNA	description=tRNA-Ser for anticodon AGA	sequence=GTGGACGTGCCGGAGTGGTTATCGGGCATGACTAGAAATCATGTGGGCTTTGCCCGCGCAGGTTCGAATCCTGCCGTCCACG	AmTr_v1.0_scaffold00016	Ensembl_Plants	LTR	5520924	5521005	694	-	.	ID=130509	repeat_name=LTR_Al_scaffold_0001_223	repeat_type=LTRs	sequence=CGTGGACGGCAGGATTCGAACCTGCGCGGGCAAAGCCCACATGATTTCTAGTCATGCCCGATAACCACTCCGGCACGTCCA
AmTr_v1.0_scaffold00009	Ensembl_Plants	tRNA	5320559	5320640	.	+	.	ID=gene:ENSRNA049434526	Name=tRNA-Ser	biotype=tRNA	description=tRNA-Ser for anticodon CGA	sequence=GTCGATATGTCCGAGTGGTTAAGGAGGTAGACTCGAAATCTACTGGGCTGTGCCCGCGCAGGTTCAAATCCTGCTGTCGACG	AmTr_v1.0_scaffold00009	Ensembl_Plants	LTR	5320559	5320644	334	-	.	ID=130501	repeat_name=LTR_Al_scaffold_0001_223	repeat_type=LTRs	sequence=AAATCGTCGACAGCAGGATTTGAACCTGCGCGGGCACAGCCCAGTAGATTTCGAGTCTACCTCCTTAACCACTCGGACATATCGA
AmTr_v1.0_scaffold00001	Ensembl_Plants	tRNA	2342205	2342276	.	-	.	ID=gene:ENSRNA049440460	Name=tRNA-Asp	biotype=tRNA	description=tRNA-Asp for anticodon GUC	sequence=GTCGTTGTAGTATAGTGGTGAGTATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCCCCGGCAACGGCG	AmTr_v1.0_scaffold00001	Ensembl_Plants	LTR	2342181	2342276	588	+	.	ID=722	repeat_name=LTR_Sl_chr_05_995	repeat_type=LTRs	sequence=TTGGTGTATCAAAATTAAAAAAACGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATACTCACCACTATACTACAACGAC
AmTr_v1.0_scaffold00001	Ensembl_Plants	tRNA	3111172	3111243	.	+	.	ID=gene:ENSRNA049440544	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon UUU	sequence=GCCGTCTTAGCTCAGTGGTAGAGCGCGTGGCTTTTAACCACGTGGTCGTGGGTTCGATCCCCACAGACGGCG	AmTr_v1.0_scaffold00001	Ensembl_Plants	LTR	3111144	3111243	621	-	.	ID=128164	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=CGCCGTCTGTGGGGATCGAACCCACGACCACGTGGTTAAAAGCCACGCGCTCTACCACTGAGCTAAGACGGCGTATGCATAGGAATATTAAAATACATT
AmTr_v1.0_scaffold00001	Ensembl_Plants	tRNA	1561848	1561919	.	+	.	ID=gene:ENSRNA049440576	Name=tRNA-Thr	biotype=tRNA	description=tRNA-Thr for anticodon UGU	sequence=GCCTCTATAGCTCAGTGGTAGAGCGTCAGTCTTGTAAACTGAAGGTCTGTAGTTCGATCCTGCATGGAGGCA	AmTr_v1.0_scaffold00001	Ensembl_Plants	LTR	1561848	1561938	363	+	.	ID=21659	repeat_name=LTR_Gm_16_5341	repeat_type=LTRs	sequence=CCTCTATAGCTCAGTGGTAGAGCGTCAGTCTTGTAAACTGAAGGTCTGTAGTTCGATCCTGCATGGAGGCAGATATTTTATTTTGTTTTC
AmTr_v1.0_scaffold00001	Ensembl_Plants	tRNA	2036067	2036138	.	+	.	ID=gene:ENSRNA049440554	Name=tRNA-Asp	biotype=tRNA	description=tRNA-Asp for anticodon GUC	sequence=GTCGTTGTAGTATAGTGGTGAGTATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCCCCGGCAGCGGCG	AmTr_v1.0_scaffold00001	Ensembl_Plants	LTR	2036066	2036138	552	-	.	ID=965	repeat_name=LTR_Gr_chr_11_2758	repeat_type=LTRs	sequence=CGCCGCTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATACTCACCACTATACTACAACGAC
AmTr_v1.0_scaffold00003	Ensembl_Plants	tRNA	9279387	9279458	.	-	.	ID=gene:ENSRNA049440355	Name=tRNA-Asp	biotype=tRNA	description=tRNA-Asp for anticodon GUC	sequence=GTCGTTGTAGTATAGTGGTGAGTATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCCCCGGCAACGGCG	AmTr_v1.0_scaffold00003	Ensembl_Plants	LTR	9279383	9279458	584	+	.	ID=967	repeat_name=LTR_Gr_chr_11_2758	repeat_type=LTRs	sequence=TGACGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATACTCACCACTATACTACAACGAC
AmTr_v1.0_scaffold00029	Ensembl_Plants	tRNA	5498963	5499047	.	-	.	ID=gene:ENSRNA049438031	Name=tRNA-Tyr	biotype=tRNA	description=tRNA-Tyr for anticodon GUA	sequence=CCGGCTTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGTGGTTTGCTGTAATCCTTAGGTCGCTGGTTCGAATCCGGCAAGCCGGA	AmTr_v1.0_scaffold00029	Ensembl_Plants	LTR	5498956	5499069	497	+	.	ID=130515	repeat_name=LTR_Al_scaffold_0001_223	repeat_type=LTRs	sequence=AAAAGGTCCGGCTTGCCGGATTCGAACCAGCGACCTAAGGATTACAGCAAACCACTACAGTCCTCCGCTCTACCAACTGAGCTAAAGCCGGATTGTTGATGTAATCAAATTTA
AmTr_v1.0_scaffold00029	Ensembl_Plants	tRNA	613974	614045	.	-	.	ID=gene:ENSRNA049437963	Name=tRNA-Asp	biotype=tRNA	description=tRNA-Asp for anticodon GUC	sequence=GTCGTTGTAGTATAGTGGTGAGTATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCCCCGGCAGCGGCG	AmTr_v1.0_scaffold00029	Ensembl_Plants	LTR	613974	614046	552	+	.	ID=970	repeat_name=LTR_Gr_chr_11_2758	repeat_type=LTRs	sequence=GCCGCTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATACTCACCACTATACTACAACGACT
AmTr_v1.0_scaffold00029	Ensembl_Plants	tRNA	317246	317318	.	-	.	ID=gene:ENSRNA049437935	Name=tRNA-Phe	biotype=tRNA	description=tRNA-Phe for anticodon GAA	sequence=GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCA	AmTr_v1.0_scaffold00029	Ensembl_Plants	LTR	317246	317319	650	-	.	ID=930	repeat_name=LTR_Mt_chr_05_582	repeat_type=LTRs	sequence=AGCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGC
AmTr_v1.0_scaffold00013	Ensembl_Plants	tRNA	3220830	3220902	.	+	.	ID=gene:ENSRNA049435484	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon UUU	sequence=GCCGTCTTAGCTCAGCCGGTAGAGCGCATGGCTTTTAACCATGTGGTCGTGGGTTCGATTCCCACAGACGGCG	AmTr_v1.0_scaffold00013	Ensembl_Plants	LTR	3220829	3220926	705	-	.	ID=128178	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=TTAAGATTTAATAACTGTTAATATCGCCGTCTGTGGGAATCGAACCCACGACCACATGGTTAAAAGCCATGCGCTCTACCGGCTGAGCTAAGACGGC
AmTr_v1.0_scaffold00013	Ensembl_Plants	tRNA	2852784	2852855	.	-	.	ID=gene:ENSRNA049435426	Name=tRNA-Asp	biotype=tRNA	description=tRNA-Asp for anticodon GUC	sequence=GTCGTTGTAGTATAGTGGTGAGTATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCCCCGGCAACGGCG	AmTr_v1.0_scaffold00013	Ensembl_Plants	LTR	2852753	2852873	651	+	.	ID=723	repeat_name=LTR_Sl_chr_05_995	repeat_type=LTRs	sequence=TTTGAGAAAAAAAATAAAATATCATATTATCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATACTCACCACTATACTACAACGACCATTTGATCATTATCGGG
AmTr_v1.0_scaffold00038	Ensembl_Plants	tRNA	3064158	3064239	.	+	.	ID=gene:ENSRNA049440301	Name=tRNA-Ser	biotype=tRNA	description=tRNA-Ser for anticodon AGA	sequence=GTGGACGTGCCGGAGTGGTTATCGGGCATGACTAGAAATCATGTGGGCTTCGCCCGCGCAGGTTCGAATCCTGCCGTCCACG	AmTr_v1.0_scaffold00038	Ensembl_Plants	LTR	3064156	3064243	702	-	.	ID=130511	repeat_name=LTR_Al_scaffold_0001_223	repeat_type=LTRs	sequence=AAATCGTGGACGGCAGGATTCGAACCTGCGCGGGCGAAGCCCACATGATTTCTAGTCATGCCCGATAACCACTCCGGCACGTCCACT
AmTr_v1.0_scaffold00002	Ensembl_Plants	tRNA	2078451	2078523	.	+	.	ID=gene:ENSRNA049436907	Name=tRNA-Phe	biotype=tRNA	description=tRNA-Phe for anticodon GAA	sequence=GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATTTGAAGGTCGCGTGTTCGATCCACGCTCACCGCA	AmTr_v1.0_scaffold00002	Ensembl_Plants	LTR	2078444	2078560	741	+	.	ID=936	repeat_name=LTR_Mt_chr_05_582	repeat_type=LTRs	sequence=CACATAGCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATTTGAAGGTCGCGTGTTCGATCCACGCTCACCGCACTACTTTTTGGTTTGCGAAGTTTTTATTTTTATTTTT
AmTr_v1.0_scaffold00002	Ensembl_Plants	tRNA	9290295	9290379	.	+	.	ID=gene:ENSRNA049436828	Name=tRNA-Tyr	biotype=tRNA	description=tRNA-Tyr for anticodon GUA	sequence=CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGTGTATGGCCGTTATCCTTAGGTCGCTGGTTCGAATCCGGCAGGTCGGA	AmTr_v1.0_scaffold00002	Ensembl_Plants	LTR	9290293	9290390	537	-	.	ID=130520	repeat_name=LTR_Al_scaffold_0001_223	repeat_type=LTRs	sequence=TCAAAGTATAATCCGACCTGCCGGATTCGAACCAGCGACCTAAGGATAACGGCCATACACTACAGTCCTCCGCTCTACCAACTGAGCTAAGGTCGGT
AmTr_v1.0_scaffold00002	Ensembl_Plants	tRNA	10297152	10297223	.	-	.	ID=gene:ENSRNA049436782	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon UUU	sequence=GCCGTCTTAGCTCAGTGGTAGAGCGCGTGGCTTTTAACCACGTGGTCGTGGGTTCGACCCCCACAGACGGCG	AmTr_v1.0_scaffold00002	Ensembl_Plants	LTR	10297152	10297224	576	+	.	ID=128180	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=GCCGTCTGTGGGGGTCGAACCCACGACCACGTGGTTAAAAGCCACGCGCTCTACCACTGAGCTAAGACGGCT
AmTr_v1.0_scaffold00045	Ensembl_Plants	tRNA	4984199	4984283	.	+	.	ID=gene:ENSRNA049440134	Name=tRNA-Tyr	biotype=tRNA	description=tRNA-Tyr for anticodon GUA	sequence=CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGTCGAATGCTGTTATCCTTAGGTCGCTGGTTCGAATCCGGCAGGTCGGA	AmTr_v1.0_scaffold00045	Ensembl_Plants	LTR	4984199	4984290	643	-	.	ID=130507	repeat_name=LTR_Al_scaffold_0001_223	repeat_type=LTRs	sequence=AAAAAATTCCGACCTGCCGGATTCGAACCAGCGACCTAAGGATAACAGCATTCGACTACAGTCCTCCGCTCTACCAACTGAGCTAAGGTCG
AmTr_v1.0_scaffold00045	Ensembl_Plants	tRNA	4310988	4311061	.	-	.	ID=gene:ENSRNA049440118	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA	AmTr_v1.0_scaffold00045	Ensembl_Plants	LTR	4310978	4311068	596	+	.	ID=135868	repeat_name=LTR_Al_scaffold_0002_362	repeat_type=LTRs	sequence=AAAAGTTTATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCCATTGTTG
AmTr_v1.0_scaffold00041	Ensembl_Plants	tRNA	1939677	1939750	.	+	.	ID=gene:ENSRNA049440941	Name=tRNA-Asn	biotype=tRNA	description=tRNA-Asn for anticodon GUU	sequence=GCTGGAATAGCTCAGTTGGCTAGAGCGTGTGGCTGTTAACCACAAGGTCGGAGGTTCAAGCCTTCCTTCTAGCG	AmTr_v1.0_scaffold00041	Ensembl_Plants	LTR	1939670	1939754	603	-	.	ID=49914	repeat_name=LTR_Mt_chr_05_619	repeat_type=LTRs	sequence=AAAGCGCTAGAAGGAAGGCTTGAACCTCCGACCTTGTGGTTAACAGCCACACGCTCTAGCCAACTGAGCTATTCCAGCCACCCG
AmTr_v1.0_scaffold00057	Ensembl_Plants	tRNA	1028585	1028666	.	+	.	ID=gene:ENSRNA049438422	Name=tRNA-Ser	biotype=tRNA	description=tRNA-Ser for anticodon AGA	sequence=GTGGACGTGCCGGAGTGGTTATCGGGCATGACTAGAAATCATGTGGGCTCTGCCCGCGCAGGTTCGAATCCTGCCGTTCACG	AmTr_v1.0_scaffold00057	Ensembl_Plants	LTR	1028583	1028667	724	-	.	ID=130518	repeat_name=LTR_Al_scaffold_0001_223	repeat_type=LTRs	sequence=ACGTGAACGGCAGGATTCGAACCTGCGCGGGCAGAGCCCACATGATTTCTAGTCATGCCCGATAACCACTCCGGCACGTCCACC
AmTr_v1.0_scaffold00058	Ensembl_Plants	tRNA	72448	72521	.	+	.	ID=gene:ENSRNA049438344	Name=tRNA-Asn	biotype=tRNA	description=tRNA-Asn for anticodon GUU	sequence=GCTGGAATAGCTCAGTTGGCTAGAGCGTGTGGCTGTTAACCACAAGGTCGGAGGTTCGAGCCCTCCTTCTAGCG	AmTr_v1.0_scaffold00058	Ensembl_Plants	LTR	72440	72539	604	-	.	ID=49850	repeat_name=LTR_Mt_chr_05_619	repeat_type=LTRs	sequence=TTAAAAAATAGGAATATACGCTAGAAGGAGGGCTCGAACCTCCGACCTTGTGGTTAACAGCCACACGCTCTAGCCAACTGAGCTATTCCAGCTAGTTTG
AmTr_v1.0_scaffold00061	Ensembl_Plants	tRNA	804287	804359	.	+	.	ID=gene:ENSRNA049438841	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon CUU	sequence=GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAACCCCACGGTGGGCG	AmTr_v1.0_scaffold00061	Ensembl_Plants	LTR	804260	804360	569	+	.	ID=135945	repeat_name=LTR_AC183412.5_672	repeat_type=LTRs	sequence=TACATTTGTGCAACACCAAGCATCAAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAACCCCACGGTGGGCGT
AmTr_v1.0_scaffold00047	Ensembl_Plants	tRNA	3249224	3249296	.	+	.	ID=gene:ENSRNA049439093	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	AmTr_v1.0_scaffold00047	Ensembl_Plants	LTR	3249223	3249303	722	-	.	ID=124318	repeat_name=LTR_Gm_18_6105	repeat_type=LTRs	sequence=AAAAGAATGGAGATGCGGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCC
AmTr_v1.0_scaffold00095	Ensembl_Plants	tRNA	1390735	1390807	.	-	.	ID=gene:ENSRNA049435723	Name=tRNA-Phe	biotype=tRNA	description=tRNA-Phe for anticodon GAA	sequence=GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCA	AmTr_v1.0_scaffold00095	Ensembl_Plants	LTR	1390709	1390807	723	-	.	ID=923	repeat_name=LTR_Mt_chr_05_582	repeat_type=LTRs	sequence=GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCATTTTCTTTTTTATGTTTGATTTTCT
AmTr_v1.0_scaffold00077	Ensembl_Plants	tRNA	1826453	1826526	.	+	.	ID=gene:ENSRNA049439287	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA	AmTr_v1.0_scaffold00077	Ensembl_Plants	LTR	1826453	1826556	611	-	.	ID=135867	repeat_name=LTR_Al_scaffold_0002_362	repeat_type=LTRs	sequence=TGAGTAAAAATGGGATAAAAATTACATTCATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGC
AmTr_v1.0_scaffold00077	Ensembl_Plants	tRNA	3154082	3154154	.	+	.	ID=gene:ENSRNA049439219	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	AmTr_v1.0_scaffold00077	Ensembl_Plants	LTR	3154081	3154154	627	-	.	ID=33633	repeat_name=LTR_Mt_chr_02_162	repeat_type=LTRs	sequence=TGGAGATGCGGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACACCCCC
AmTr_v1.0_scaffold00071	Ensembl_Plants	tRNA	2267991	2268072	.	-	.	ID=gene:ENSRNA049434797	Name=tRNA-Ser	biotype=tRNA	description=tRNA-Ser for anticodon CGA	sequence=GTCGATATGTCCGAGTGGTTAAGGAGACAGACTCGAAATCTGTTGGGCTGTGCCTGCGCAGGTTCGAATCCTGCTGTCGACG	AmTr_v1.0_scaffold00071	Ensembl_Plants	LTR	2267990	2268072	332	+	.	ID=130503	repeat_name=LTR_Al_scaffold_0001_223	repeat_type=LTRs	sequence=CGTCGACAGCAGGATTCGAACCTGCGCAGGCACAGCCCAACAGATTTCGAGTCTGTCTCCTTAACCACTCGGACATATCGAC
AmTr_v1.0_scaffold00069	Ensembl_Plants	tRNA	2650636	2650709	.	+	.	ID=gene:ENSRNA049434710	Name=tRNA-Asn	biotype=tRNA	description=tRNA-Asn for anticodon GUU	sequence=GCTGGAATAGCTCAGTTGGCTAGAGCGTGTGGCTGTTAACCACAAGGTCGGAGGTTCAAGCCCTCCTTCTAGCG	AmTr_v1.0_scaffold00069	Ensembl_Plants	LTR	2650636	2650717	618	-	.	ID=49829	repeat_name=LTR_Mt_chr_05_619	repeat_type=LTRs	sequence=ATTGCAAACGCTAGAAGGAGGGCTTGAACCTCCGACCTTGTGGTTAACAGCCACACGCTCTAGCCAACTGAGCTATTCCAG
AmTr_v1.0_scaffold00106	Ensembl_Plants	tRNA	1001709	1001781	.	+	.	ID=gene:ENSRNA049435646	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	AmTr_v1.0_scaffold00106	Ensembl_Plants	LTR	1001698	1001782	665	-	.	ID=124335	repeat_name=LTR_Gm_18_6105	repeat_type=LTRs	sequence=ATGGAGATGCGGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACACCCCCTTTTAATCTT
AmTr_v1.0_scaffold00137	Ensembl_Plants	tRNA	416372	416453	.	+	.	ID=gene:ENSRNA049436184	Name=tRNA-Ser	biotype=tRNA	description=tRNA-Ser for anticodon UGA	sequence=GTCGATATGTCCGAGTGGTTAAGGAGACAGACTTGAAATCTGTTGGGCTACGCCCGCGCAGGTTCGAACCCTGCTGTCGACG	AmTr_v1.0_scaffold00137	Ensembl_Plants	LTR	416372	416462	346	-	.	ID=130513	repeat_name=LTR_Al_scaffold_0001_223	repeat_type=LTRs	sequence=AAATAAAAACGTCGACAGCAGGGTTCGAACCTGCGCGGGCGTAGCCCAACAGATTTCAAGTCTGTCTCCTTAACCACTCGGACATATCGA
AmTr_v1.0_scaffold00169	Ensembl_Plants	tRNA	154374	154447	.	-	.	ID=gene:ENSRNA049437517	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA	AmTr_v1.0_scaffold00169	Ensembl_Plants	LTR	154356	154455	597	+	.	ID=135874	repeat_name=LTR_Al_scaffold_0002_362	repeat_type=LTRs	sequence=ATTTAAAACCAATTCAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCCAGATGTTA
AmTr_v1.0_scaffold00140	Ensembl_Plants	tRNA	1026266	1026337	.	+	.	ID=gene:ENSRNA049434178	Name=tRNA-Thr	biotype=tRNA	description=tRNA-Thr for anticodon UGU	sequence=GCCTCTATAGCTCAGTGGTAGAGCGTCAGTCTTGTAAACTGAAGGTCTGTAGTTCGATCCTGCATGGAGGCA	AmTr_v1.0_scaffold00140	Ensembl_Plants	LTR	1026266	1026337	342	+	.	ID=21663	repeat_name=LTR_Gm_16_5341	repeat_type=LTRs	sequence=CCTCTATAGCTCAGTGGTAGAGCGTCAGTCTTGTAAACTGAAGGTCTGTAGTTCGATCCTGCATGGAGGCA
AmTr_v1.0_scaffold04679	Ensembl_Plants	tRNA	283	355	.	+	.	ID=gene:ENSRNA049437866	Name=tRNA-Thr	biotype=tRNA	description=tRNA-Thr for anticodon UGU	sequence=GCCCGCTTAGCTCAGGGGTTAGAGCATCGCATTTGTAATGCGATGGTCATCGGTTCGATTCCGATAGCCGGCT	AmTr_v1.0_scaffold04679	Ensembl_Plants	LTR	282	373	601	+	.	ID=80048	repeat_name=LTR_Os_chr_04_669	repeat_type=LTRs	sequence=GCCCGCTTAGCTCAGGGGTTAGAGCATCGCATTTGTAATGCGATGGTCATCGGTTCGATTCCGATAGCCGGCTTTTCTCTATTTGTTCAAT
AmTr_v1.0_scaffold03732	Ensembl_Plants	tRNA	309	381	.	-	.	ID=gene:ENSRNA049437828	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	AmTr_v1.0_scaffold03732	Ensembl_Plants	LTR	288	381	684	+	.	ID=33650	repeat_name=LTR_Mt_chr_02_162	repeat_type=LTRs	sequence=AAAAAAAAAGCTTTATAGGATGGAGATGCGGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCC
AmTr_v1.0_scaffold00176	Ensembl_Plants	tRNA	2923	3004	.	-	.	ID=gene:ENSRNA049435901	Name=tRNA-Ser	biotype=tRNA	description=tRNA-Ser for anticodon AGA	sequence=GTGGACGTGCCGGAGTGGTTATCGGGCATGACTAGAAATCATGTGGGCTCTGCCCGCGCAGGTTCGAATCCTGCCGTTCACG	AmTr_v1.0_scaffold00176	Ensembl_Plants	LTR	2919	3004	708	+	.	ID=130517	repeat_name=LTR_Al_scaffold_0001_223	repeat_type=LTRs	sequence=AATCGTGAACGGCAGGATTCGAACCTGCGCGGGCAGAGCCCACATGATTTCTAGTCATGCCCGATAACCACTCCGGCACGTCCAC
AmTr_v1.0_scaffold00006	Ensembl_Plants	tRNA	6583021	6583094	.	+	.	ID=gene:ENSRNA049440017	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA	AmTr_v1.0_scaffold00006	Ensembl_Plants	LTR	6583015	6583106	619	-	.	ID=135869	repeat_name=LTR_Al_scaffold_0002_362	repeat_type=LTRs	sequence=AAAATATAGTATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCCTGATG
AmTr_v1.0_scaffold03573	Ensembl_Plants	tRNA	140	224	.	+	.	ID=gene:ENSRNA049437642	Name=tRNA-Ser	biotype=tRNA	description=tRNA-Ser for anticodon UGA	sequence=GTCGATATGTCCGAGTGGTTAAGGAGACAGACTTGAAATCTGCTGGGCTTCGAGGCCCGCGCAGGTTCGAACCCTGCCGTCGACG	AmTr_v1.0_scaffold03573	Ensembl_Plants	LTR	140	224	293	-	.	ID=130523	repeat_name=LTR_Al_scaffold_0001_223	repeat_type=LTRs	sequence=CGTCGACGGCAGGGTTCGAACCTGCGCGGGCCTCGAAGCCCAGCAGATTTCAAGTCTGTCTCCTTAACCACTCGGACATATCGA
AmTr_v1.0_scaffold00077	Ensembl_Plants	pre_miRNA	2616703	2616902	.	+	.	ID=gene:ENSRNA049456632	Name=MIR159	biotype=pre_miRNA	description=microRNA MIR159	sequence=GACTTGCGGAGGGAGCTCTCTTTAGTCCACCTATGGTTGGTGTCTAGGGGTCGAATTATCTGCCGACTCATTCATTCAAATAATTGGTAGAAAGGCCGTGATTTTTCTCTCTACTCTTTAAATTTGTGAATGATGCGGGAGATAAATTTCACCCTTGCCTCACCATTCTTGGACTGAAGGGAGCTCCCTCTCTCTCTCTC	AmTr_v1.0_scaffold00077	Ensembl_Plants	DNA/En-Spm	2616883	2616964	251	+	.	ID=123861	repeat_name=trep4397	repeat_type=Type II Transposons	sequence=AGCTCCCTCTCTCTCTCTCATCTCTCACTCTCATCTCTCTCTCTCTCTCTCCTCTGTTTATGAGTTATGTTTGGGGAGCTT
AmTr_v1.0_scaffold00135	Ensembl_Plants	pre_miRNA	1171853	1171927	.	-	.	ID=gene:ENSRNA049456444	Name=mir-598	biotype=pre_miRNA	description=microRNA mir-598	sequence=TTATAATGATGATGTTCATCATCATGATCATGATGATCATCATCATCAACATGATCATGATGATGATCATAATAA	AmTr_v1.0_scaffold00135	Ensembl_Plants	LTR/Gypsy	1171790	1171959	457	-	.	ID=87526	repeat_name=LTR_Sb_chr_03_48	repeat_type=LTRs	sequence=AATAATAATGATAACAATAATAATAAAATAAATTATAATGATGATGTTCATCATCATGATCATGATGATCATCATCATCAACATGATCATGATGATGATCATAATAATAATAATAATATTGTAATAATAATATTAATAATAATAATGATGATGATGATCAAAATAATAA
AmTr_v1.0_scaffold00859	Ensembl_Plants	SRP_RNA	817	1089	.	-	.	ID=gene:ENSRNA049461434	Name=Plant_SRP	biotype=SRP_RNA	description=Plant signal recognition particle RNA	sequence=TCACAGAGCAGCGATTACCTCTCACTCTTAAGAGTGGAGGAGATCGCGTGAGGCTGGTAGATTTGGTACTTAAGAGTGGAGGAGATCGCGTGAGGCCTGGTTTCACAGAGCAGCGATTACCTCCCGCTCTTAAGAGTGGAGGAGATCGCGTGAGGCTGGTTTCACAGAGCAGCGATTACCTCCCGCTCTTGGCAGTGGAAGGATTGCACGTTCGTGTGTGATCTGCCCAATCCAAACCCTTGAGCTCCCAAACTCGCTTGGACAACCGCTTTT	AmTr_v1.0_scaffold00859	Ensembl_Plants	LTR/Copia	940	1017	314	-	.	ID=135600	repeat_name=ARSiTERT00100011	repeat_type=LTRs	sequence=AGAGTGGAGGAGATCGCGTGAGGCCTGGTTTCACAGAGCAGCGATTACCTCCCGCTCTTAAGAGTGGAGGAGATCGC
AmTr_v1.0_scaffold00859	Ensembl_Plants	SRP_RNA	817	1089	.	-	.	ID=gene:ENSRNA049461434	Name=Plant_SRP	biotype=SRP_RNA	description=Plant signal recognition particle RNA	sequence=TCACAGAGCAGCGATTACCTCTCACTCTTAAGAGTGGAGGAGATCGCGTGAGGCTGGTAGATTTGGTACTTAAGAGTGGAGGAGATCGCGTGAGGCCTGGTTTCACAGAGCAGCGATTACCTCCCGCTCTTAAGAGTGGAGGAGATCGCGTGAGGCTGGTTTCACAGAGCAGCGATTACCTCCCGCTCTTGGCAGTGGAAGGATTGCACGTTCGTGTGTGATCTGCCCAATCCAAACCCTTGAGCTCCCAAACTCGCTTGGACAACCGCTTTT	AmTr_v1.0_scaffold00859	Ensembl_Plants	LTR/Copia	1042	1119	298	-	.	ID=135601	repeat_name=ARSiTERT00100011	repeat_type=LTRs	sequence=AGAGTGGAGGAGATCGCGTGAGGCCTGGTTTCACAGAGCAGCGATTACCTCTCACTCTTAAGAGTGGAGGAGATCGC
AmTr_v1.0_scaffold00859	Ensembl_Plants	SRP_RNA	817	1089	.	-	.	ID=gene:ENSRNA049461434	Name=Plant_SRP	biotype=SRP_RNA	description=Plant signal recognition particle RNA	sequence=TCACAGAGCAGCGATTACCTCTCACTCTTAAGAGTGGAGGAGATCGCGTGAGGCTGGTAGATTTGGTACTTAAGAGTGGAGGAGATCGCGTGAGGCCTGGTTTCACAGAGCAGCGATTACCTCCCGCTCTTAAGAGTGGAGGAGATCGCGTGAGGCTGGTTTCACAGAGCAGCGATTACCTCCCGCTCTTGGCAGTGGAAGGATTGCACGTTCGTGTGTGATCTGCCCAATCCAAACCCTTGAGCTCCCAAACTCGCTTGGACAACCGCTTTT	AmTr_v1.0_scaffold00859	Ensembl_Plants	LTR	886	973	396	+	.	ID=135605	repeat_name=LTR_AC198290.2_10424	repeat_type=LTRs	sequence=TCCTTCCACTGCCAAGAGCGGGAGGTAATCGCTGCTCTGTGAAACCAGCCTCACGCGATCTCCTCCACTCTTAAGAGCGGGAGGTAA
AmTr_v1.0_scaffold00016	Ensembl_Plants	SRP_RNA	2559543	2559848	.	-	.	ID=gene:ENSRNA049458618	Name=Plant_SRP	biotype=SRP_RNA	description=Plant signal recognition particle RNA	sequence=ACCGGGCTCGGTAGCGTGGGCTTGTAACTCAAGCGAGGGTACACAAGGTGGTTGAACTGTGATTTGGCTCTCTTGGGTGGGCTGGTTGCGCTTGATTCGATGTGTCCTTTCCAAGCCAGGAGTCGGCTTTGCTCCTCTAACCGAAGGTTTAGGGTGGGCTCGGACTTAGAATGGAGGAGAATGCGTGAGGCTGGTTTCACAGAGCAGCGATTACCTCCTCCTCTTGGCAGTGGAAGGATAACACATTGGTGCGTGGACTGCCCAATCAAACTCTAGAGCTCCATACTCATATGGACAACCATTTTT	AmTr_v1.0_scaffold00016	Ensembl_Plants	LTR/Copia	2559542	2559707	440	-	.	ID=135599	repeat_name=ARSiTERT00100011	repeat_type=LTRs	sequence=CGAAGGTTTAGGGTGGGCTCGGACTTAGAATGGAGGAGAATGCGTGAGGCTGGTTTCACAGAGCAGCGATTACCTCCTCCTCTTGGCAGTGGAAGGATAACACATTGGTGCGTGGACTGCCCAATCAAACTCTAGAGCTCCATACTCATATGGACAACCATTTTT
AmTr_v1.0_scaffold00016	Ensembl_Plants	SRP_RNA	2559543	2559848	.	-	.	ID=gene:ENSRNA049458618	Name=Plant_SRP	biotype=SRP_RNA	description=Plant signal recognition particle RNA	sequence=ACCGGGCTCGGTAGCGTGGGCTTGTAACTCAAGCGAGGGTACACAAGGTGGTTGAACTGTGATTTGGCTCTCTTGGGTGGGCTGGTTGCGCTTGATTCGATGTGTCCTTTCCAAGCCAGGAGTCGGCTTTGCTCCTCTAACCGAAGGTTTAGGGTGGGCTCGGACTTAGAATGGAGGAGAATGCGTGAGGCTGGTTTCACAGAGCAGCGATTACCTCCTCCTCTTGGCAGTGGAAGGATAACACATTGGTGCGTGGACTGCCCAATCAAACTCTAGAGCTCCATACTCATATGGACAACCATTTTT	AmTr_v1.0_scaffold00016	Ensembl_Plants	LTR	2559608	2559838	283	+	.	ID=135604	repeat_name=LTR_AC198290.2_10424	repeat_type=LTRs	sequence=TATCCTTCCACTGCCAAGAGGAGGAGGTAATCGCTGCTCTGTGAAACCAGCCTCACGCATTCTCCTCCATTCTAAGTCCGAGCCCACCCTAAACCTTCGGTTAGAGGAGCAAAGCCGACTCCTGGCTTGGAAAGGACACATCGAATCAAGCGCAACCAGCCCACCCAAGAGAGCCAAATCACAGTTCAACCACCTTGTGTACCCTCGCTTGAGTTACAAGCCCACGCTAC
AmTr_v1.0_scaffold00101	Ensembl_Plants	snoRNA	402594	402677	.	+	.	ID=gene:ENSRNA049460451	Name=snoZ102_R77	biotype=snoRNA	description=Small nucleolar RNA Z102/R77	sequence=GAGTGAGATGATGAATAATGATAATTACTGTTTTGAGTGCCTAGATGATGGCACAAACATTGTATTAGCTCTATCTGATCACTC	AmTr_v1.0_scaffold00101	Ensembl_Plants	DNA/TcMar	402520	402614	361	+	.	ID=16389	repeat_name=trep4411	repeat_type=Type II Transposons	sequence=CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATGTAAAGGAATAAATTTAGAAAATTACAGTTTAAGAGTGAGATGATGAATAATGA
AmTr_v1.0_scaffold00101	Ensembl_Plants	snoRNA	402420	402505	.	+	.	ID=gene:ENSRNA049460444	Name=snoZ101	biotype=snoRNA	description=Small nucleolar RNA Z101	sequence=GTTGGGCAAATGATGAAACGAAACAAATGGGTAATTTGCGGCTGAATTTATATTGATGCCATCACCTTGGAGACCTGATGCCCATC	AmTr_v1.0_scaffold00101	Ensembl_Plants	LTR/Gypsy	402488	402571	345	-	.	ID=70427	repeat_name=LTR_Sb_chr_09_124	repeat_type=LTRs	sequence=TATTCCTTTACATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAGAGAGATGGGCATCAGGTCTC
AmTr_v1.0_scaffold00101	Ensembl_Plants	snoRNA	402420	402505	.	+	.	ID=gene:ENSRNA049460444	Name=snoZ101	biotype=snoRNA	description=Small nucleolar RNA Z101	sequence=GTTGGGCAAATGATGAAACGAAACAAATGGGTAATTTGCGGCTGAATTTATATTGATGCCATCACCTTGGAGACCTGATGCCCATC	AmTr_v1.0_scaffold00101	Ensembl_Plants	LTR/Copia	402476	402569	252	-	.	ID=141127	repeat_name=LTR_AM932683.1_259	repeat_type=LTRs	sequence=TTCCTTTACATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAGAGAGATGGGCATCAGGTCTCCAAGGTGATGGC
AmTr_v1.0_scaffold00003	Ensembl_Plants	antisense_RNA	5892532	5892719	.	-	.	ID=gene:ENSRNA049457866	Name=IsrR	biotype=antisense_RNA	description=Antisense RNA which regulates isiA expression	sequence=AATAACCAAATATAACACTTGGGCTAAGTGTCAGGTTGGTTATTTTTCTTATATCTCCGTCACCGAGGGCCCAAGTATCATATACGCCTCCAAAATAAAGAGCCTTGAACATTTAGGAGAAAAGCATCTACGCCTAATAAAATTAAGTGACTACCCAAAATAGTGGTTATTTTATTTCTATCTTTCCA	AmTr_v1.0_scaffold00003	Ensembl_Plants	LTR	5892399	5892961	3324	-	.	ID=139597	repeat_name=LTR_Gr_chr_04_953	repeat_type=LTRs	sequence=ATTGAACCAAAAGAAACAACAAGCAATGAAACCAAAGACAGATAAAGCCCCCAAACTATAAGACAAGTAAACTTCTCCAGACTATACAAATGCACGGCGAACCCACGTAAAAGGTTTGGTTAAGATATGCCATATTCCACCAAGTATACAAATGAAACCGACCCATACATGTCCTCCAATTATATCTTCTAAATCATCCACACTAACAATCCATCCTTCTCCCCTAAAAGGAGATTTTAGCAAATAACCAAATATAACACTTGGGCTAAGTGTCAGGTTGGTTATTTTTCTTATATCTCCGTCACCGAGGGCCCAAGTATCATATACGCCTCCAAAATAAAGAGCCTTGAACATTTAGGAGAAAAGCATCTACGCCTAATAAAATTAAGTGACTACCCAAAATAGTGGTTATTTTATTTCTATCTTTCCATACATAACCAAAAAATGGAAAGGATTCTTCAAAAGTCTCAGGTCCAAGAAGTGCATGATAAATACCACCAAAGCCTAGGACTGCAGAGGAAATTAAATACAACACTCCAGATACAAAGTATGGAAAGGTGTC
AmTr_v1.0_scaffold00141	Ensembl_Plants	antisense_RNA	135626	135817	.	+	.	ID=gene:ENSRNA049456948	Name=IsrR	biotype=antisense_RNA	description=Antisense RNA which regulates isiA expression	sequence=AATAACCAATATAACACTTGGGCTAAGTGTCAGGTTGGTTATTTTTCTTACATCTCTGCCACCGGGGGCCCAGGTAACATATATGCCTCCAAAATAAAGAGCAGAGCATTGAACACTAGGAGAAAAGGCGCCTACACCTAATAAGATTAAGTGAATACCGAAAATAGTTGTCATTTCATTTCTATCTTTCCA	AmTr_v1.0_scaffold00141	Ensembl_Plants	LTR	135425	135892	2612	+	.	ID=139606	repeat_name=LTR_Gr_chr_04_953	repeat_type=LTRs	sequence=TAAAGCCCCCAAATTATAAGACAAGTAAGCTTCTCCAGACCATACAAATGAACGGCGAGCCCACGCAAAACGTTTGGTTAAGATATGCCATATTCCACCAAGTATACAAATGAAACCTAACCATACAGGTCCTCCAATTATATCTTCTAAATCATCCACACTAACAATCCATTATTCTTCCTCAAAAGGAAATTTTAGTAAATAACCAATATAACACTTGGGCTAAGTGTCAGGTTGGTTATTTTTCTTACATCTCTGCCACCGGGGGCCCAGGTAACATATATGCCTCCAAAATAAAGAGCAGAGCATTGAACACTAGGAGAAAAGGCGCCTACACCTAATAAGATTAAGTGAATACCGAAAATAGTTGTCATTTCATTTCTATCTTTCCATACATAACCGAAGAATGGAAGGATTCTTCAAGAGTCTTAGGTCCAAGAAGTGCATGATAAATACAACCAAAGCTC
AmTr_v1.0_scaffold00059	Ensembl_Plants	antisense_RNA	2702350	2702509	.	-	.	ID=gene:ENSRNA049455062	Name=IsrR	biotype=antisense_RNA	description=Antisense RNA which regulates isiA expression	sequence=AATAATCAAATATAACACTTATGGCTAAGTGTCAACTTGATTATTTTTCTTACCTCTTCGCCACAGGGAACCCGTTATATAAATGCTCCTTAAGCACTACGAGAAAAGCGCGTTAGCCTAATAAGACAATTTCCAAGAAAATGTTTATTTCTTTTTCCCC	AmTr_v1.0_scaffold00059	Ensembl_Plants	LTR	2702457	2702685	872	-	.	ID=139596	repeat_name=LTR_Gr_chr_04_953	repeat_type=LTRs	sequence=AATAAGCTTTTATATACCATACCAATGCACGGCGAGCACATGCAAAAGGTTTTGGCTAAAGATATTCCACCAAATATACAAATGAAACCTAATTATACATGTCTTCCATTTATATCATCTAATTTCTAAATAATTCACACAAGCAATTCATCACTCTTCAATAGGCGATTTTAGCAAATAATCAAATATAACACTTATGGCTAAGTGTCAACTTGATTATTTTTCTTA
AmTr_v1.0_scaffold04036	Ensembl_Plants	antisense_RNA	1970	2133	.	-	.	ID=gene:ENSRNA049461162	Name=IsrR	biotype=antisense_RNA	description=Antisense RNA which regulates isiA expression	sequence=AATAATCAAATATAACACTTTGGTAATTTTTCTTACATCTCCCCCTCCGGGAGCCCAGGTAGCATATATACCCCCAAAATAAAGAGCCTTGAATACTAGAAGAAAGGCCCCTATACCTAACAAGATTAAGTGAATACCCAGGTCATTTTCTTTCTATCTTTCCA	AmTr_v1.0_scaffold04036	Ensembl_Plants	LTR	1837	2375	3322	-	.	ID=139608	repeat_name=LTR_Gr_chr_04_953	repeat_type=LTRs	sequence=ATTGAACCAGACAAAGCAACAAGCAATGAAACCAAAGACAGATAAAGTACCTAAACTATAAGACAAGTAAGCCTCTCCAGACCATACAAGTGCACGGCGAGCCCATGCAAAGGGTTTGGTTAAGATATGCCAGATTCCACCAAGTATACAAATGGAACCTACCCATACATGTCCTCCGATTATATCTTCCAAATCGTCCACACTAACAATCCATCAAAATCCGTTTTAGGGGGATTTTAGTAAATAATCAAATATAACACTTTGGTAATTTTTCTTACATCTCCCCCTCCGGGAGCCCAGGTAGCATATATACCCCCAAAATAAAGAGCCTTGAATACTAGAAGAAAGGCCCCTATACCTAACAAGATTAAGTGAATACCCAGGTCATTTTCTTTCTATCTTTCCATACATAACCGAAGAATGGAAAAGATTCTTCTTCAGTCTCAGGTCCCAGAAGTGCATGATAAATACCGCCAAAGCCCAATACTGCAGATGAAAGTAAGTGAAGTACTCCAGATAATTAGTATGGAAAAGTGTC
AmTr_v1.0_scaffold00102	Ensembl_Plants	antisense_RNA	1329951	1330135	.	-	.	ID=gene:ENSRNA049459941	Name=IsrR	biotype=antisense_RNA	description=Antisense RNA which regulates isiA expression	sequence=AATAACCAAATATAACACTTGGGCTAAGTGTCAAGTTGGTTATTTTTCTACATCTCTACCACCAGGGGCCTAGGTATCATATACGCCTCCAAAATAACGAGCCTTGAACACTAAGAGAAAAGCACCTACACCTAATAACATTAATGAGTACCCAAAATAGTGGTCATTTTATTTCTATCTTTCTA	AmTr_v1.0_scaffold00102	Ensembl_Plants	LTR	1329818	1330379	3318	-	.	ID=139601	repeat_name=LTR_Gr_chr_04_953	repeat_type=LTRs	sequence=TTAATGAACCAGACGAAACAGCAAGCAATGAAACCAAAGTTAGATGAAACCCCCAAATTATAAGACAAGTAAGCTTCTCCAGACCACACAAATGCGTGGCCAGCCCACGCAAAAGGTTTGGTTAAGATATGCCATATTCCCCCAAGTATACAAATGAAACCTAACCATACCTGTCTTCCAATTATATCTTCTAAATCGTCCACACTAACAATCCATCCTTCTCCCCCAAAAGGAGATTTTAGCAAATAACCAAATATAACACTTGGGCTAAGTGTCAAGTTGGTTATTTTTCTACATCTCTACCACCAGGGGCCTAGGTATCATATACGCCTCCAAAATAACGAGCCTTGAACACTAAGAGAAAAGCACCTACACCTAATAACATTAATGAGTACCCAAAATAGTGGTCATTTTATTTCTATCTTTCTATACATAACCAAAGAATGGAAAGGATTCTTCAAGAGTCTCAAGTCCAATAAGTGCATGATAAATACCACCAAAGCCTAGGACTGCAGAGGAAATTAAATGAAGTACTCCAGATACAAAGTATGGAAAGGTGTC
AmTr_v1.0_scaffold00015	Ensembl_Plants	antisense_RNA	7317795	7317986	.	-	.	ID=gene:ENSRNA049454229	Name=IsrR	biotype=antisense_RNA	description=Antisense RNA which regulates isiA expression	sequence=AATAACCAAATATAACACTTGGGCTAAGTGTCAGGTCAAGTTGGTTATTTTTCTTACATCTCCGCCACCAGGGGCCCAAGTATCATAAACGCCTCCAAAATAAAGAGCCTTGAACACTAGGAGAAAAGCGCTTACACCTAATAAGATTAAGTGAATTCCCAAAATAGTGGTCCTTTTATTTCTATCTTTCCA	AmTr_v1.0_scaffold00015	Ensembl_Plants	LTR	7317630	7318031	2168	+	.	ID=144223	repeat_name=LTR_Gm_09_3061	repeat_type=LTRs	sequence=AGGTTGGGGGGAGGTCCTAGGGGGAAGTTATAGACAGCTTTGCATACTTTGTATCTAGAGTACTTTATCTAATTTCCTTTGCAATCCTAGGCTTTGGTGGTATTTATCATGCATTTCATGGACCAGAGACTCTTGAAGAATCCATTCCATTCTTCAGTTATGAATGGAAAGATAGAAATAAAAGGACCACTATTTTGGGAATTCACTTAATCTTATTAGGTGTAAGCGCTTTTCTCCTAGTGTTCAAGGCTCTTTATTTTGGAGGCGTTTATGATACTTGGGCCCCTGGTGGCGGAGATGTAAGAAAAATAACCAACTTGACCTGACACTTAGCCCAAGTGTTATATTTGGTTATTTGCTAAAATCTCCTTTTGCGCGAGAAGGATGGATTGTTAGTTGGA
AmTr_v1.0_scaffold00390	Ensembl_Plants	sense_intronic	10068	10152	.	+	.	ID=gene:ENSRNA049460852	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=AGGAGCCGAATGAAATCAAAGTTTCACGTTCGGTTTTGAATTAGAGACGTTAAATTAAAACTGATGAATCAACGTCGACTATAAC	AmTr_v1.0_scaffold00390	Ensembl_Plants	LTR	10068	10137	249	-	.	ID=56189	repeat_name=LTR_Al_scaffold_0002_336	repeat_type=LTRs	sequence=GATTCATCAGTTTTAATTTAACGTCTCTAATTCAAAACCGAACGTGAAACTTTGATTTCATTCGGCTCC
AmTr_v1.0_scaffold00390	Ensembl_Plants	sense_intronic	12785	12872	.	-	.	ID=gene:ENSRNA049460820	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=GAGAGCCAAATGAATCGAAAGATTCATGTTTGGTTCGGGAAGGGATCGTGGAAGTTTTGAAATGAATGGAAAGATAATCTACTTTCAT	AmTr_v1.0_scaffold00390	Ensembl_Plants	LTR	10541	13127	13682	+	.	ID=80065	repeat_name=LTR_Os_chr_04_669	repeat_type=LTRs	sequence=AACAAGAAAAAGAAAAAATAAAAAATTGAAATGAAAAGCGTCCATTGTCTAATGGATAGGACAGAGGTCTTCTAAACCTTTAGTATAGGTTCAAATCCTATTGGACGCAATTTATTTCCATATGTATTTTATTTGATATTTCTATATCAAGAAAGATGTTTTGAATGGCTTAAATAAAAGATCCGCTTCTTATATACACTTCTTACTTAATATAGACAGATTTACGGATTTAAAGAGATCCAGTTATTTAGACTTGTTCTTGAAGTAGAAAACGCTCCATTTGTTCTTGAATCGCTTGTTTCAAAAGGGCTTCTGCTTCTTCAGTAAATGTCTTGGTAGAAGATATGATTTCTTGGAATTGAGGTTTATTCGTTTTTAAATAATTCCGTAACTCAAGCAGAAATTTCCTTACCTGGCCAATTTCTAATGAATCAAGATAACCGTTCGTTCCGGTATAAATAGTGATTATCTGTTCTTCCACCGAAAGAGGGGCTGATTGAGATTGTTTGAGTAATTCACGTAATCGTTGACCTCTTGCCAATTGATTCTGAGTAGCTTTATCGAGATCAGAAGCGAATTGTGCAAAGGCTTCTAACTCTGCAAATTGAGCCAGTTCCAATTTTGATTTGCCAGCTACTTGTTTCATAGCTTTAATTTGAGCTGCGGATCCTACTCTGGAAACGGAAATGCCCACATTAATAGCAGGGCGGATTCCAGCATTGAACAGATCGGCGGATAAGAATATTTGTCCATCTGTAATCGAAATTACATTAGTAGGAATATAAGCTGAAACATCTCCCGATTGGGTCTCAACTATTGGTAAAGCAGTCATACTTCCTTCACCTAAACTAGAACTTGATTTAGCAGCTCTTTCCAAAAGGCGTGAATGCAAATAAAAAACATCTCCGGGATAAGCTTCGCGGCCCGGTGGTCTTCGTAATAAAAGAGACATTTGGCGATAAGCCTGTGCTTGTTTGGAGGGGTCGTCATAAATGATTGAAGTGTGTTGTTCACGGTACATAAAAAATTCAGCAAGAGCTGCTCCTGTGTAAGGAGCGAGGTATTGTAATGTGGCCGGAGAATCCGCCGTTTCAGCTACCACAATAGTGTATTCCATAGCTCCCCTTTCCTGTAAAGCAGTCACCACCTGAGCCACAGAAGATGCTTTTTGACCAATAGCTACATAAACGCATATTACATTTTGCCCTTGTTGGTTGAGAATCGTATCTGTAGCTACTGCTGTTTTCCCAGTCTGTCTGTCCCCAATAATTAATTCTCGCTGACCACGTCCTATAGGTATCATAGAATCAATAGCAATAAGTCCTGTTTGAAGAGGCTCATATACGGAACGTCTCGAAATAATACCCGGAGCGGGAGATTCAATTAAACGAGATTCAGAAGTTGAAATTTCACCTCGACCATCAATAGGTTTAGCCAGCGCATTTACAACACGACCCAAAAAAGCCTCACTTACCGGTATCTGAGCAATTCGTCCTGTTGCTTTTACAGAACTCCCTTCTTGTATCAGCAAACCGTCACCCATTAATACAACACCGACATTGCTTGATTCCAAATTCAGAGCAATGCCTATGGTACCCTCTTCAAATTCTACTAATTCACCTGCCATTACTTCATCAAGACCATAAATACGAGCAATACCATCGCCTACTTGAAGTACGGTACCGGTATTTAAAATCTTTACTTCTCTATTATATTGTTCAATACGTTCACGGATAATATTACTAATTTCATCGGCTCGGATGGTTACCATGAATATTTCTTAATTCTTTTTTTTCTTTCAAACAAAAAAAAATAATCCTTGCAGTAGAAGGACTAATCCGTTATTTCTTTCATCATTCCAAACATGTCAATATTAGTACTGATGGTACGTAAATGTAACTCGTTGTTCAAACAACTATTCAGAGTTCCTAGAGCTCCTTGTAAGGCTTGTTGGAAAACCTGTTGTCGAACTTGGTTAATCGCTCTTTGTTGTTCAAAACGAATGGTTTCATTTTTGTAATTTTTTAATTGTTCCAAAGTCTTAGAAGTTGAATTAATCAAATTCAATTTTTCTCGTTCTATCTCAGAATATCCATTCACTCGAAACAGATCCGCTTCCTTTTCTACTTTTAGTAAGCGGGTCCGGGCTTTTTCCAGTTGTTCTAGGGCCCTCCCGCGTAGTTCTTCTGAATTTCGAATAGTCTTCAAGATCTTCTGTTTTCGATTATCTAATAAATCACTTAATGAAAGTAGATTATCTTTCCATTCATTTCAAAACTTCCACGATCCCTTCCCGAACCAAACATGAATCTTTCGATTCATTTGGCTCTCACGCTCAATTACTTCTGATACTTATCAGAATTCCCAATATCTTTTTTTTAATGTAATGAGCCTGTCCTCTCTTCTCTAGTCATATTCGAATATAAAAATATTGAAACTGCTCACTAATCCAATAAAAAAAATATTCGGAGGACTCTTCTGACCAAACAAATAATTGTCAGCAAAGTTGTTTCTTTTTTTTCCTCAAATCCAAAGAATTCCTCTTACTTTATACATAGGTCATCCACTTAGCATTGGATAAAAAAG
AmTr_v1.0_scaffold00456	Ensembl_Plants	sense_intronic	9458	9535	.	-	.	ID=gene:ENSRNA049460797	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=AGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTGGAATAGCGATGGGAACAGTGATGGTATCATCGACTATAAT	AmTr_v1.0_scaffold00456	Ensembl_Plants	Retroelement	9034	9577	3718	+	.	ID=14148	repeat_name=RXX_Gk_DX403548.1_7560	repeat_type=Unknown	sequence=ATCTTGTTGTGATAGGAATGAACAAGAACAAATAAGTTTTAGCTAATGTAATAAAGATACCTATTGTTGGTTCAAAAACACCATATGTTTTATTTATTTCAAAAAACTCAGAAACAAATATGTATGGAATAGAGATATTCCAACCGCCCAAGTAAAGAACTGTTACAAATAATGAAGAAACTAATAAGTTGAGATAGGAAGCAACGTAAAATAAACCAAATTTGATCCCCGAGTATTCGGTTTGATAACCTGCTACTAATTCTTCTTCTGCTTCTGGTAAATCAAAAGGTAATCTTTCACATTCTGCTAGCGAAGAAATTATAAAAATGATAAACCCTATAGGTTGACGCCACAAATTCCATCCCCAAAAACCATATTTTGATTGGGCCTCAACTATATCAACTGTACTTGAACTATTAGATAATTATAGTCGATGATACCATCACTGTTCCCATCGCTATTCCAGAACCGTACATGAGATTTTCACCTCATACGGCTCCTTGAGGACCATAAATAAATCTAAGGACCGGATCCCTATTATTT
AmTr_v1.0_scaffold00585	Ensembl_Plants	sense_intronic	4479	4553	.	+	.	ID=gene:ENSRNA049460768	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=TCGAGCCGGATGATGAAAAATTATCATGTCCGGTTCTTTCGGGGGATGGATCGAGAATAATTCACCTATCCTAAT	AmTr_v1.0_scaffold00585	Ensembl_Plants	LTR/Copia	4476	4665	1293	+	.	ID=139159	repeat_name=Bd3_RLC_1	repeat_type=LTRs	sequence=GCTCGAGCCGGATGATGAAAAATTATCATGTCCGGTTCTTTCGGGGGATGGATCGAGAATAATTCACCTATCCTAATAACAAAAAAACCTGACTTGAACGATCCTGTATTAAGAGCTAAATTGGCTAAAGGGATGGGTCATAATTATTATGGAGAACCTGCATGGCCCAATGATCTTTTATATATTTTT
AmTr_v1.0_scaffold00585	Ensembl_Plants	sense_intronic	8644	8720	.	-	.	ID=gene:ENSRNA049460760	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=AGGAGCTGGATGAGAAGAAACTCTCATGTCCGGTTCTGTAGTAGAGATGGAATTAATAAAAAACCCTCAACTATAAC	AmTr_v1.0_scaffold00585	Ensembl_Plants	LTR	8680	8722	258	+	.	ID=56161	repeat_name=LTR_Al_scaffold_0002_336	repeat_type=LTRs	sequence=TACAGAACCGGACATGAGAGTTTCTTCTCATCCAGCTCCTCG
AmTr_v1.0_scaffold00334	Ensembl_Plants	sense_intronic	29631	29699	.	+	.	ID=gene:ENSRNA049460749	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=CTGAGCCGTATGAGGTCGGAAACTCTCAAGTACGGTTCTAAGGGAAGGAATTTATCCGCCTATTCCGAC	AmTr_v1.0_scaffold00334	Ensembl_Plants	LTR	28034	29882	8587	+	.	ID=80042	repeat_name=LTR_Os_chr_04_669	repeat_type=LTRs	sequence=AGACGCATTATTATTATTTGGGATAGAAAGAAAAAAATTATTTTTAAAAATCTACGCTTGTTAAAGGTGAAGTTTGTAAATAAAACAAGCCCTTCTGTCGTGTATCCCCGATTAATGCAGCCTCAAATGCTTCAATCGTCGATTCTAGAGTATTGAGCGAAAGGTTAAGACCTATGGGTTAGGTCAAACCTACTCGCCTAGTACCAATAGGAGGCACAGAGGAAGAGGCACTACTGCTAGGAATCAACAACACGAAAACTTTGTTATAAATTATCCCTTTTCCTTATTAAGATCGGGGCTAACAAGAATGGTTGGGACAACAAACATCCATCTCGTTCGTGTTTTGGATACCCGTATAATCATCGAAGACTGTTGAAGTGACTAATTCCTGAAAATTAAGAGGCGTTTAAGACAAAGAAATTGCTGGAGTCACCCTTTTTTTATCTAGTACTAACATACTTGATGTTAAAGAAAGATCTTTTCCAAGAAGGTTGGCTAGAGATTTCTTGTAAAAACACTAGCCCCGCTCAGTTTATAATGAGAATATTTCCATTTTTTGGATTCCATGTATTATTTTTATTATGTACATAAAGGAGGAGCCGTATGAGATGAAAATCTCATGTACGGTTCTGAAACGGAGATTCATTGAATCGAATGACGACCGTAACGGATGTCGGCTCAATCCGAAGGAAATTATGCAGAAGCTTTACAGAATTATTATGAAGCTATGCGACTAGAAATTGATCCCTATGATCGAAGTTATATACTCTATAACATAGGCCTTATCCACACAAGAAACGGAGAACATACGAAAGCTTTGGAATATTATTTTCGTGCCCTAGAGCGAAATCCATTCTTACCACAAGCTTTTAATAATATGGCCGTGATCTGTCATTACGTGCGACTATCTCCACTATAGAAATAAAAAGTGAAAAGAAAAAAAAGAGTGAATCCATTAATAAATACTCGAAAAAAAAAAAATAGGTTTTCTACATATGTATCGTCTAAAACAACGATTTTTATCAGCTGTAGCAAAGAAATAAACTTCATAGAATTTGAAAAATGAATCTGAAGAAATAGGTATGCCTAGATACTTTATTCTATGGATAAAAGATCTAATTGATAGAGGAAGCACCGTAAAGATCAATTCGCGAGGTTTTGGGCCGATACAATAAGAACTGCTTATTTATGTCATGATATGACATAAAAGTTAGGAATCAACTTATGTAATAGAGTGGATCCCCTAAGGTATTGAGCAGCGGTGTAGCATCAGATCCCAAAGATAGTAAGCCTTTTCCTTCTTATAATTTTAAGAATTATAAAGGAAAGTCTTTTTCAAGGATTCTATATAAATTTATATATGAAACCGAGATAGTTACCTTTTTATAAAACTCTAATGATAGTGGAAATGCCTATACTTTATGAAGGTGGGAGAAAAGAGAAAACTGATTAAATTATTGACTAAATTAGTAAGCAAAATTCAAGTTTGAAACTCATAACCTCTTTCTTTTGGTTAACTCTAGAAAAAAAAAAATGGGATAAATCCATGAAAAATCCCATTCAATTTGATAAAGGGACACCAAAAGAACTTGACTGCTGAGCCGTATGAGGTCGGAAACTCTCAAGTACGGTTCTAAGGGAAGGAATTTATCCGCCTATTCCGACCGGGGAGAACAAGCCATTCGGCAAGGAGATTCAGAAATTGCGGAGGCTTGGTTCGATCAAGCTGCCGAATATTGGAAACAAGCTCTAGCGCTTACTCCTGGTAATTATATTGAAGCGCAGAATTGGTTGAAGATTACAAGGCGTTTCGAATAAGAACACTTTTTTATTATTTTTTTTATTATT
AmTr_v1.0_scaffold00172	Ensembl_Plants	sense_intronic	303471	303555	.	+	.	ID=gene:ENSRNA049460332	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=GAAAGCCGTGTGCAATGAAAAATGCAAGCACGGTTTCGGGAGAGATCCTTTTCTCTTATTCAAAGAGTGAGATTATCTACTCCAT	AmTr_v1.0_scaffold00172	Ensembl_Plants	LTR	303452	303520	228	-	.	ID=56113	repeat_name=LTR_Al_scaffold_0002_336	repeat_type=LTRs	sequence=AAGGATCTCTCCCGAAACCGTGCTTGCATTTTTCATTGCACACGGCTTTCCCTATGTATACATCTAAA
AmTr_v1.0_scaffold00102	Ensembl_Plants	sense_intronic	1294860	1294935	.	+	.	ID=gene:ENSRNA049459980	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=AGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTGTAGAGTGACAGTAAGGGTGACTTATTTTTCAACTTTTC	AmTr_v1.0_scaffold00102	Ensembl_Plants	LTR	1291902	1297828	22621	-	.	ID=55871	repeat_name=LTR_Al_scaffold_0002_336	repeat_type=LTRs	sequence=TAATCCTTAACTTTTCGAGGAATCCTTCATCAGTGGTTGTGAATGACTGATTTTTTTTCAATCTTTTCGACCCGGGTTCTGTAGGAGCAAGTCAAAAAGATTGAGAAATAGAACCATCTGATTTGATTCGTTCTAAATAGCCATGGGATGATCATCTTAGGGCGATCTTTTTGTCGACGGATGCTCCTATTACATTCGTAGTCTCTGAAGGATGAGAACCAACTATGTAACATCTACATCGAGAATTCATTAGTCCGATCCTTTGTAGGAACTACCCGTAACAACGAGCTTGCAAAATGGATCTGTTTATCATAAAGAGATTCGTTGTTCCTGACATTGCTTCACCTTAATTATAATTTGAACAAAATATCACAATCAACTTTTCTTTTGGTAAAAGTTATGTCTAGGTCCGAGAGGGGATAGCATTTCTCTTCTGCATGTCCATGGAGTTTTGAAAAATCCAAACATCTGTGAGATAGAGATAGATATAGAGGTAGGAATTTGTCGAACGAACCGCACTCCTTCATATACGTCAGGAGTCCATTGATGAAATGGGGCTAGGGAAAGATTGAACCCAATTCCTACAGTGATGGATAGAAGCACAATCGAAATTCCCGGGGAGTTATACATTTGTGTATTGATAAGACCATTCACTATTTCTTGAAGCTCGATCTCTCCCCCTGATGAGCCATATAGCCAAAAGAAACCATGAACCAGAATAGAAGGGCTCGTCCCACTCATGAGTAAATATTTCGTAGTAGCCTCATTAGACCGTACGTCTCTCGTAGTATATCCCGATAATAGGTAGGAGCATAAACTGAAACATTCTGGAGCTACAAAGATAGTTATTAAATTGTTAGTACTACATAAAAACATTCCTCCTAGAGTAGTTGTTGATGCGAATAACAGAAACTCTGTTATAGCCATTTCTGTACATTCAATGTACTCTACTGATAGAGGAATACATAGAGTTGAACATAGTAAAATAAGAAATTGAAAGATTTTGTTGAAATTGTTCGTTTGGAAATTCCCCGAAAAGCTAATCATATGTTCTTCTCTCCATCGGAACAATAGGGTCGTTATGCTCATTACTAAACTTGTTGAAGAGATGAAATAGAACCAAGGTCTAGCTTCTTTATCAGAGGTTGAATCAATCATTAGAAGAAGAATTAGGCCAAAAATTAGGATACATTATGGGAAAATGAAACTTCCATGAAAGAGAAGCAAATGAAAGGCTTTCATAAAAATTCTCGTAGAATTGAGAATGATAACTTCATTCTGTACATGCCAGATCATGAATTAGTAAATGCACCCAATCTCCGAAAAAGTCCCAATTGTTTCGAACTTTCTATTTTTTGAATGGGATATTTACAGAATCCCCATGAATAGGATCAAACCTTATTCCATGGTATTTCCATGAGATTCGTCTTTCATGTTTTTAAGCAAGTCCCCAATAGGGCTTAGTTGATCCATGATTGATGCTTCATCTTTTTTTTTCTTTTTTGTTTGTTTCGAGAAACATATCGATCAATTCTGATTCTGTCTTTTTCTATCGATTCTTTTCTGATCGAGATGTATGGATCCATGGATCTATGTGTCTATATAGATTCCTTTTCATGGATTAATGAAATGTGCAAAAGCTCTATTGGCCTCCGTCATTCAATGAGGCTCTTCCTTTTTGCATATGGCATCGTCGTTCCCTTTGGCAGCATCCACTAATTCGGAACTTAACTTGAAAGCCATATTAATAACCAACGAATGGCAAGTGCCTTTCCTTGTGTAGATCCTATTTCAATGGGAACTTGATGAATCGATCCACCTACACGTCTTGCTTTTACTGCTATATCGGAAGTTACTCCACGTATTGCTTGACGTAAAATAGATAGTGGATTTGTTTCTATCTTTTGTTGAATCTTTTTCAAGGCTCGATAGATAATTTGATAAGCCAATGATTTTTTTTTTGTGTTTCAAAATATGGTTAACCAACATGTTAACTAATCGATTACGATAAATTGGATCGGATTTTGCAGTTTTTTCTTCTGCAGCACCTCAACGTGACATGAGCGTGAAAAAGGTTCAAGAATCAGTTTTATAAGGGCTAAAAATGAATCACTTATTTTGGCTTTTTGAACCCATATTGTAGGGTAGATCTCGAAAGATATGAAATATCTCCCTCCATGCCGTACATATGACTTTCATCGAATACAGCTTTCCACATAATTCTATATGTATGTATGGGATCAAGTATGGAATTCTGTTTACTCACATTGAGTATCTATTTCCCTCCTTTTCTTGCTGTGATTGGAAATCATGTATTTTACATATCCATACGATCGAATCCTTGGGTTTCCGAACAAGTGTAAAAAGAAGTGCTTTGAATCATTGCTATTTGACTCGGACCTATTATGAAAAAGTCGAGGTATTTCAAATCGTTTGTTGACACAGATAAAGTCAAGAAAAACCTTTGATTTCAATATTGGACCTTGGACATATAATAGTTCTGAATCTCTTTAGAAAGAAGATCTTTTGTCTCATGGTAGCCTGCTCTAGTCCCCTTACGAAACTTTCATTATTGGGTTAGCCATATACTTCACATGTTTCTAGCAATTCAAATGGCATCATCAAATGACACAAGTCTTGGATAAGAATCTACAACCCACTAGAATGCCCTTGTTGACGATCCTTTACCCTGACAGCATCTAGGATTCCTCGAACAATGTGATATCTCACACTAGGTAAATCCTTAGCCCTACCTCCTCTAACTAATACTACATAATGTTCTTGTGAATTATGGCCAATACCATGTATATAAGCAGTGATTTTAAATCCAAAGGTTAATCGTACTTTGGAAACTTTACGTAAGGCAGAGTTTGGTTTTTTGGGGGTGATAGTGGAAAAGTTGAAAAATAAGTCACCCTTACTGTCACTCTACAGAACCGTACATGAGATTTTCACCTCATACGGCTCCTCATTCAATTCTTTCGAAGTAATTGGATTTTCTCCCTCGAGAATCTCCTCCCTTCTTCCACTTCATCCCGAGGACTAACTAGGACCAATTCAGTCGCGTTTTCATGTTCCAAAATGAACACTTTCCATTTCTTATTATGATCGTAGGAGAAGATTCTTCTTTTAACCAAATAGATGGGGATCCAATCACGATCTTATATTCTAATAAGAACAAGAGATCTTTCTCGATCAATTCTTTATTCTATTTTCTCTCCTTCTCTCTTTCTCTTTTTATTTCTGTACATCATTCATTAAGTCCAATAGGTTTGATCCTATAGAATCTGATCCATTTTCTCATTGAGCGAACGGCACGAAATCAATCAGATTTCTTTTTCGATCAAAACAAAAGTACTATAGTGAGTGTGTTGTGTGAAATCTTTGGTTTTTTCTTATTCCTCTATCCTTATCCCATAGGTACAGTATTTGGATAACCTTTTCTTTTGTATGAATCGATATTATTACATTCCAATTCCTTCCCGATATCTCCCAAGGAAAATCCCAAATTGACGGGTTAGTGTGAGCTTATCCATGCGGTTATGCACTCATTGAATGTGAATCAATTTTTTGAAAGATCTTGACTTTCGTGCTTTGGTGGGTTGTCTGAGATCCTTTCGATGACCTATGTTGAAGGGATATCTATATGATCCGATCAATTGCGTAAGGCTCGCAGTAGCAACAGAACTGGGGAAAGTCTAGAGAAAAGACAGTTCTTTTCTATTATATTTATTATACTATTATATTAGTTAATTTAGTTAGTGATCCCGGCTTGGTGAATCCTTTCTTCGTGATGAACTGTTGGCACCAGTCCTACATTTTTCCTTTGTGGGCCGAGCAGAAAAGGGGGGGGCTTAGCGGGAAGAGGATTGTACCATGAGAGAACAAGGAGGTCAACCTGATTCAAATATACAACATTGATTCTGGCAATGCAATGTAGTTGGACTCTCATGTCGATCTGAATGAATCAGTCTTTCCACGAACCACGGAGGTAAATCTTTGCTTGCTAGGCAAGAAGGTAGCAAGTTACAAATTCTGTCTCGGTAGGACATGTATTTCTATTATATTAAGTAGACAATATATTAAGTAGTTAACGGTGGGGTTATCATCATCCTTTTTGTAGTGATGAATCTTGTATGTGTTCCTAAGAAAAGGAATGAGTCCATTTTTCAAGGTCTCAAAAGGGCGTGGAAACACATAAGAACTCTTTAATGGAAATGGAAAGGAGATGTAGGTTCAGTTCCTACGAAAAGGGTAAGATCTTTGGCACAAGAATAACGGGTTGATCCGGATCATCTTGAATGGGTTCTGCTTCCTCTGTTTTTTTTTTAACAATACTGAGTCGAGTTCTTCTCCTACCAGTATCGAATAGAACATGCTGAACAAAATTTTCTTCATGTAAAACCTGCTCGATTTAGATCGAGAAAATCGTACGGACTTTATGAAACCATGTGCTATGGCTCGAATCCGTAGTCAATCCTATTTCTGATAGGATATACGTTGTTGACAATTGAATCCAATTTTCTCATTATTTCCGTATCCGTAATAGTGCGAAAAGAAGGCCCTGCTCCGAGTTGTTCAAGAATAGTGGAATAGTGGCGTTGAGTTTATCAACCCTTTGACTTAGGATTAGTCAGTTCTATTTCTCGATAGGTGCAGTGAAGGGATATAACTCAGCAGTAGAGTGTCACCTTGATGTGGTGGAAGTCATCAGTTCAAGCTTGATTATCCCTAAAACCAATGCAAAACTTTTATTTTGACTTGCTCCCCCGCCATGATCGAATGAGAATGGATAAGAGGCTCGTGGGATTGACGTGAGAGGGTAGGGATGTCTATATTGTTGGGAGCAAACTCCAGGCTAATATGAAGCGCACGAATACAAGTTATGCCTTGAGATGAAAGACAATTCTGAATCAGCTTTGTCCACGAAGAAGGAAGCTATAAGTAATGCAAATATGAATCTCATGGAGAGTTTGATACTGGCTCAGGATGAACACTGACAACATGCTTAACACATGCAAGTCAGATGGGAAGTGGTGTTTCCAATGGCGGACATGTGAGTAACGTGTAAGAACTTGCTCTTGAGAGGGCAACAACAACTGGAAACGACTGCTAATACCTCATAGGCTCAAGAGAAAAAGGAGGAATCTGCCCAAGGAGGGGCTCGTGTCTGATTAGGTAGTTGGCGAGGCAATAGCTTACCAAGGCGACTATCAGGAGCTGGTCCGAGAGGATAATCAACCACACTGGGATTGAGACATGGCTCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTTTGCAATGGGCGAAAGCCTGACGAAGCAATGTCGCATGGAGGTAGAAGGCCCACGGGTCGTGTACTTCTTTTCTCGGAGAAGAAGCAATGACGGTATCCAAGGAATAAGCATCGGCTAACTCTGTGGCAGCAGCAGTGGTAAGACAAAGGATGCAAGCATTATCCGAAAAGATTGGGCATAAAGTGTCTGTAGGTGGCTTTTAAATTCCGCCTTTAAATCCCAGGACTCAACCCTGGACAGGCGATGGAAACTACCAAGCTGGAGTACAGTAGGGGCAGAGGGAATTTTCGATGGAGCAATGAAATGCGTAGAGATCAGAAAGAACACCAATAGCGAATGCATTCGGCTAGGCCGACACTAACACTGAGAAACAAAAGCTAGGGGAGCAAATGGGATTAGATACCCCAATAGTCCCAACCGTAAACGATGGATACTAGGCTTTGTGAGTATCGACCCGTGCAATGTTGTAGCTAACACATTAAGTATCCCGCCTGGGGAGTACGTTCGCAAGAGTGAACTCAAAGGAATTGACGGGGGCCCGCACAAGAGGTGGAGCATTTGGTTTAATTCGATGCAAAGCAAAGAACCTTACCAGGGCTTGACATGCCACGAATCCTCTTGAAAGA
AmTr_v1.0_scaffold00189	Ensembl_Plants	sense_intronic	348577	348652	.	+	.	ID=gene:ENSRNA049459478	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=AGGAGCCATATGAGGTGAAAATCTCATGTACGGTTCTGTAGAGTGACAATAAGGGTGACTTATCTGTCAACTTTGC	AmTr_v1.0_scaffold00189	Ensembl_Plants	LTR	348403	349140	4958	-	.	ID=56131	repeat_name=LTR_Al_scaffold_0002_336	repeat_type=LTRs	sequence=AAGTCGAGGTATTTCAAATAGTTTGTTGACACAAACAAAGTCAGGGAAAACCCCTGAAATGATTTCAATATTGGACCTTGGACATATAACAGTTCCGAATCTCTTTAGAAAGAATCTTTTGTCTCATGGTAGCTTGCTCCAGTCCCCTTACGCAACTTTCGCTATTGGGTTAGCCATGTACTTCACATGTTTCTAGTGATTCACATGACATCATCATCAAATGATACAAGTCTTGGATAAGAATCTACAATGCACTAGAACGCCCTTGTTGAGGATCCTTTACTCTGACATCATCTAGGGTTCCTCAAAAAAGGTGATATCTCACACCAGGTAAATCCTTAACCCTTCCTCCTCTTACTAATACTACATAATGTTCTTGTGAAGTATGGCCAATGCAAGGTACATAAGCAGTGATGTTAAATCCAGAGGTTAATCGTACTCTGGCAACTTGGCGTAAGGCAGAGTTTGGATTTTTGAGGGTGATAGTGGCAAAGTTGACAGATAAGTCACCCTTATTGTCACTCTACAGAACCGTACATGAGATTTTCACCTCATATGGCTCCTCGTTCAATTCTTTCGAAGTAATTGGATTCTTTTCCAATTTCGATAATCTCCTCCCTTCTTCCACCTCGTCTCGAAGAGTAACTATGACCAATTCAATCTCGTTTTCATGTTCCGATTGAACACTTTCCATTTTTTATTATGATCAAAGGAGAAGATTCTTTTTTTTACCAAAC
AmTr_v1.0_scaffold00072	Ensembl_Plants	sense_intronic	221860	221947	.	+	.	ID=gene:ENSRNA049459289	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=GAGAGCTAAATGAATTGAAAGATTCATGTTCGGTTCGAAAAGAGATCATAGAAGTTGTGGAATTGATATGGAGACAATCTACTTTCAT	AmTr_v1.0_scaffold00072	Ensembl_Plants	LTR	221350	223945	11733	-	.	ID=80080	repeat_name=LTR_Os_chr_04_669	repeat_type=LTRs	sequence=ATTTATGTTTGTTCCTGAAATAGAAACAATTCTATCTGTTCTTGAATAGCTTCTTTCAAAATGACTTATGCTTCCTCGGTGAATGTCCAGGTAGATGATATGATTTCTTGGAACCGAGGCTTATTTGTTCTTAAATAAGTACGTAAATGAACGAGAAATTTCTTCACTTATCCAATTTCTAATGGATCAAGATATCCATTCACTCCTGTATAAATAGTAACTATCTGTTCTTCCACTGCGAGAGGGGCTGCCTGAGATTGTTTGAGCAACTTGCGCAATTGTTGACCTCTTGCCAATTGATTATGAGTAGCTTTATCGAGATCATAAGCGAATTGTGCAAAGGCTTCTAGCTCTACAAATTGAGCTAGTTCCAATTTTGATTTGCCAGCTACTTGTTTCATAGCTTTAATTTGAGCTGTGGATCCTACCTTGGAAATGGAAATACCCACATTAATAGCAGGCTCCAAAATTGAATAGATCGTTAGATAAGAAGATTTGTCCATCTGTAATGGAAATTACATTAGTGGGAATATAAGCCGAAACGTCCCCAGATTGAGTCTTAACTATTGGTAAAGCAATCATACTTCCTTCGCCTAAACGAGAACTTGATTTAGCGGCTCTTTCCAAAAGTCGGGGATGCAAATAAAAAACATCTCCTGGATAAGCTTTGCGACCAGTCGGTCTTCTTAATAGAAGAGATATTTGGCTATAAGCTTGTGCTTGTTTAGAGGGATCATCACGAATTATTAAAATATGTCGTTTACAGTACATAAAATATTCAGCCAAGGCTGCTCTTGTATAAGGAGCTTATAATGTAGCAGGTGAATCCACTGTTTTAGCTACCACAATAGTGTATTCCATTGCTCCTTGTTCCTAGAAAGTAGTCACTACCTGCACCATGGAAGATGCTTTTTGACCAATAGCTCCATAAACACATATTACATTTTGCCCTTTTTGATTCAGAAATAGTATCTATAGCTACCATTGTTTTATCGGTCTATTTGTCCCCACTAATTAATTCTCGCTTACCGCATCCTATAATAATCATGGAATCAATAGCAATAAGACATATTTGAAGAGGTTCATATACAGAATGTCTTGAAATAATACATGGTGTGGGGGATTCAATTAACCGAGATTCGAAAGATGAAATCTCACCTCTCCCATCAATAGGTTTAGCCAGAGCATTTATAACACGACCTAAATAAGCCTCACTCACTGGTATCTAAGAAATTTTTCCTATTGCTTTTACAGAACTGCCCTCTTGTATCATTAAACCATCACCCATTAATACAACACCAACATTATTAGATTCCAAATTTGGAACAATGCCTATTGTACTCTCTTCAAATTCTACTAATTCACCTGCCATTACTTCATCAAAAGCATGAATACAAGCAATGCCATTGCCCACTTGAAGTAAAGTGCCAGTATTAACAATCTTTACTTCTCTATTATATTGCTCAATTCATTCACAGATAATATTTACTAATTTCGTCAGCTTGAATGGCTACCATTAGTGTCTTAATTCTTTTTTGGAAGCAAAACAAGAAAAAATAAAAAAAATAATACCTATGGTAGAAGTAAAATAATCAGTTATATTTTTCATGGTCCCGAGCATGCCAATATTAGCACTGATGGTGCGTAAATGTAACTCGTTGTTCAAATAACTATTCAGAGTTTCTACAGCTCCTTGCAAGGCTTGTTGGAAAACTCGTTGTGGGACCTGATTCATCGCTCTTGGTTGTTCAAAATGAATGCTTTCATTTTTGTAATGTTCTAATCATTCTAAATTTTCAAACGCAGCATTAATCAAATTCCTTTTTTCTCGTTCTATCTCAGAGTATCCATTCACTCGAAACTTATCTGCTTCAATTTCCACTTTTCGTAAGCGAGCCTGGGCTTTTTCAAGCTGCTCAATGGCTCCCCCACGTAGTTCTTCTGAATTGCGAATCATACTCAAGATTCTCTGTTTTCGATTATCTAATAAATCACTTAATGAAAGTAGATTGTCTCCATATCAATTCCACAACTTCTATGATCTCTTTTCGAACCGAACATGAATCTTTCAATTCATTTAGCTCTCATGCTCAATTAATTATGGGATACTCTCGTATCTTTTAATGAGCCTATCCTCTCTTTGTCTTCTAAGATATCGAAACTGATACAAGACCAGGATCCCCGGTGGGCTCTTCCGACCAGGTAACTGTCAGGAAGTCGTTTCTTTTATTTGATTATCTTTAAATCCAAAGAGCTTTTATTCTACATAGATCGTCAATTCAGCATTGGATAAACAAAGTCGAAGTGCCCATCTTTTACAGTAAATGGTTCACAATTATTTTATCGATATGAGTGTTCTACATCAGATAAATTACTAACTCTTCATTTTGAAACCATCTCTACTAATGCAGTGGTAGAAAGAGCACCCCATTGTGCCTGCATTTCAAACTTTAGCTTTAACCATGTAAAGGGCCTACATTATTGGATCAATTGACAGAGAATCAAAGTTAATTTACCAATGAGCCACAAAATGCTATAGTTCCTACAGATGATTTTTTTAGTTATTCAGAAGTAATTTGTCGAGATCATACACCT
AmTr_v1.0_scaffold00028	Ensembl_Plants	sense_intronic	1774826	1774899	.	-	.	ID=gene:ENSRNA049458937	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=GAAAGCCGTATTCGATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCATATCTTTCGAGATCCACCTTAC	AmTr_v1.0_scaffold00028	Ensembl_Plants	LTR	1774648	1776412	6812	+	.	ID=55911	repeat_name=LTR_Al_scaffold_0002_336	repeat_type=LTRs	sequence=ATGTTTCAGAATACGGTTAACCAACATGTTAACTAATCGATTACGATAAATTGGATCGGATTTTGTAGTTTTTTCTTCTGCAGTACCTCGACATGACATGAGCGAGAAAAAGGTTCAAGAATCAATTTCATAAGGGCTAAAAACGAATCACTTATTTTGGCTTTTTGACCCCATATTGTAAGGTGGATCTCGAAAGATATGAAAGATCTCCCTCCAAGCCGTACATACGACTTTCATCGAATACGGCTTTCCACAGAATTTATATGTATCTATGGGATCGAGTATGGAAATATGTTTACTCACTTTAGATTGAGTATCCATTTCCCTCCTTTTCTTGCTATGCTTGGAAATCCTGTAATTTACATATCCATATAATCGAGTCCTTGGGTTTCCGAAAGAGTGTAAAAAGAATTGCTTCGAATCATTGCTATTTGACTCGGACCTGTTTCGAAAAACTCGAGGTATTTCCTATCGTTTGTTGACACGAAAAAAGTCAGGGAAAACCTCTGAAATGATTTTAATATTGAACCTTGGATATATAATAGTTTCGAGTCTCTTTAGAAAGAAGATCTTTTGTCTCATGGTAGCATGCTCCAATCCACTAATGAAACTTTCGTTATTGGGTTAGCCATATACTTGACATGTTTCTAGAGATTCACATGGCATCATCAAATGATACAAGTCTTGGATAAGAATCTACAACACACTAGAACGCCCTTGTTGACGATCCTTTACTCCGACAGCATCTAGGGTTCCTTGAACAATGTGACATCTCACACCGGTTTAATCCTTAACCCTCCCTCCTCTTACTAATACTACAGAATGTTCCCATGAACTATGGCCAATACCAGGTATATAACCAGTGATTTCAAATCCAGGGGTTAATCGTACTCTGACAACTTTACGTAAGGCATAAGTCACCATTACTGTCACTCTACATAAGTGTACATGAGATTTTCACCTCATACGGCTCCTCACTCAATTATTTCGAAGTAATTGGATCCTTTTCCACCCTCGAGAATCTCCTCCCTTCTTCCACTGTGTCCCGAGGGTAACTCGGACCAATTCAGTCGCATTTTCATGTTCCAATTTAACATTTTCCATTTTTGATTATGATCAAAGGAGAAGATTCTTCTTTTCACCAAACAGATGCCGATCGAATCACGATATTATGTTCTAATAAGAAAAAGAGATCTTTTTTTATCAATTCTTTATTTTTATTTTTTCTCCTTCTCTTTTTTTCTTTTTGTTCCCTTCCATCATTCCTTAAGTCTCATAGTTTTGATCTTGTAGAATCTGATCCATTTTCTCATCGAGTGAAGGGCAAGAAATCAATCAGATTTCCTTTTCGATCAAAACAAAAGTACTATAGTGAGTCTGGTGTGTGAAATATTCGGTTTTTTCTTATTCCACTATCCCTATCCCATAGGTATAATGTTTGAATCAATAGATGACCTTTTATTCTGTGTGAATCTATATTATTATAATCCAATTCCTTCCCGATATCTCCCAAGGAAAATCCCAAATTGAATCCCAAATTGACGAGTTAGTGTGAGCTTGTCCATGCAGTTATGCACTCTTCGACTAGGAATCAATTTTCTAAAAGATCCTGGCTTTCGTGCTTTGGTGAGTCGTCCAAGATCCTTTCGATGACCTATGTTGAAGGGATATCTATATGATCCGATCAATTACATGGGGCCCACGGTGGCAACAGAACCAGGGAAAGTCTAGAAAAAAGACAATTCTTTGCTATTATGTTTATTA
AmTr_v1.0_scaffold00040	Ensembl_Plants	sense_intronic	1774144	1774364	.	-	.	ID=gene:ENSRNA049457159	Name=Intron_gpI	biotype=sense_intronic	description=Group I catalytic intron	sequence=CTGCATACTTAATTGAATTGAGCCTTGGTATGGACACCTACTAAGTGGTAGCTCTAAATTCAGAGAGACCTTGGAATGAGAAATGGGCAATCCTGAGCCAAATCCTGTTTAGAGAAAACAAAGGTTCCTAGAAAGTGAGAAGGATAGGTGCAGAGACTCAACGAAAGCTGTTCCAACAAATGAAATTGACCTCGTCGGTAGAGGAATCAAGCCATATATAG	AmTr_v1.0_scaffold00040	Ensembl_Plants	LTR/Gypsy	1774179	1774393	1133	-	.	ID=143510	repeat_name=LTR_AC188734.2_15331	repeat_type=LTRs	sequence=AAAAGGGGATATGGCGAAATTGGTTGATGCTGCATACTTAATTGAATTGAGCCTTGGTATGGACACCTACTAAGTGGTAGCTCTAAATTCAGAGAGACCTTGGAATGAGAAATGGGCAATCCTGAGCCAAATCCTGTTTAGAGAAAACAAAGGTTCCTAGAAAGTGAGAAGGATAGGTGCAGAGACTCAACGAAAGCTGTTCCAACAAATGAAA
AmTr_v1.0_scaffold00038	Ensembl_Plants	sense_intronic	3536796	3536964	.	+	.	ID=gene:ENSRNA049455135	Name=Intron_gpI	biotype=sense_intronic	description=Group I catalytic intron	sequence=CTATGGACTTAATTAAATTGAGCCTTGGTATGGAAACCTACTAAGTGGTAGTTTCTAAATTCAGAGAAACCCTGAAATGATAAATGGGCAATCCTGAGCCAAATCCTGTTTAAAGAAAACAAGGGTCAACATCTTTTTGACTTTTTACATCTGATCCAAAATACTCTGG	AmTr_v1.0_scaffold00038	Ensembl_Plants	LTR/Gypsy	3536771	3536918	1030	+	.	ID=143507	repeat_name=LTR_AC188734.2_15331	repeat_type=LTRs	sequence=GGGATATGGCGAAATTGGTAGACGCTATGGACTTAATTAAATTGAGCCTTGGTATGGAAACCTACTAAGTGGTAGTTTCTAAATTCAGAGAAACCCTGAAATGATAAATGGGCAATCCTGAGCCAAATCCTGTTTAAAGAAAACAAG
AmTr_v1.0_scaffold00012	Ensembl_Plants	sense_intronic	5942894	5942967	.	-	.	ID=gene:ENSRNA049454772	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=GAAAGCCGTATTCGATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCATATCTTTCGAGATCCACCCTAC	AmTr_v1.0_scaffold00012	Ensembl_Plants	LTR/Gypsy	5942799	5943121	2521	+	.	ID=6275	repeat_name=RLG_Gk_DX403759.1_7620	repeat_type=LTRs	sequence=GTACCTCGACGTGACATGAGCGCGAAAAAGGTTCAAGAATCAGTTTTATAAGGGCTAAAAAGAATCACTTATTTTGGCTTTTTGACCCCATATTGTAGGGTGGATCTCGAAAGATATGAAAGATCTCCCTCCAAGCCGTACATACGACTTTCATCGAATACGGCTTTCCACAGAATTCTATATGTATCTATGGGATCGAGTATGGAATTCTGTTTACTCACTTTAGATTGAGTATCCGTTTCCCTCCTTTTCTTGCTATGATTGGAAATCCTGTATTTTACATATCCATACGATCGAGTCCTTGGGTTTTCGAAAGAGTATA
AmTr_v1.0_scaffold02071	Ensembl_Plants	sense_intronic	1314	1389	.	-	.	ID=gene:ENSRNA049461309	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=AGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTGTAGAGTGACAGTAAGGGTGACTTATCTGTCAACTTTTC	AmTr_v1.0_scaffold02071	Ensembl_Plants	LTR	1	3872	14640	+	.	ID=56195	repeat_name=LTR_Al_scaffold_0002_336	repeat_type=LTRs	sequence=GATTAACGAAAATGTGCAAAAGCTCTATTGGCCTCTGCCATTCTATGAGTCTCTTCCTTTTTGCGTATGGCATCGCCGTTCCCTTTGGCAGCATCCACTAATTCGGAACTTAATTTGAAAGCCATATTTCGACCCGGACGTTTTCGGGATGCCCCTAATAACCAACGAATGGCAAGTGCTTTTCCTTGTGTAGATCCTATTTCAATGGGAACTTGATGAGTCGATCCGCCTACACGTCTTGCTTTTACTGCTATATCGGGAGTTACTCCACGTATTGCTTGACGTAAAACAGATAGTGGATTTGTTTCTGTCTTTTGTTGAATCTTTTTCAAGGCTCGATAGATAATTTGATAAGCCAATGATTTTTTTCCGTGTTTCAGAATACGGTTAACCAACATGTTAACTAATCGATTACGATAAATTGGATCGGATTTTGCAGTTTTTTCTTCTGCAGTACCTCGACGTGACATGAGCGCGAAAAAGGTTCAAGAATCAGTTTTATAAGGGCTAAAAACGAATCACTTATTTTGGCTTTTTGACCCCATATTGTAGGGTGGATCTCGAAAGATATGAAAGATCTCCCTCCAAGCCGTACATACGACTTTCATCGAATACGGCTTTCCACAGAATTCTATATGTATCTATGGGATCGAGTATGGAATTCTGTTTACTCACTTTAGATTGAGTATCCGTTTCCCTCCTTTTCTTGCTATGATTGGAAATCCTGTATTTTACATATCCATACGATCGAGTCCTTGGGTTTCCGAAAGAGTGTAAAAAGAAGTGCTTCGAATCATTGCTATTTGACTCGGACCTGTTCTGAAAAAGTCGAGGTATTTCAAATCGTTTGTTGACACGGACAAAGTAAGGGAAAACCTCTGAAATGATTTCAATATTGGACCTTGGACATATAATAGTTCCGAATCTCTTTAGAAAGAAGATCTTTTGTCTCATGGTAGCCTGCTCCAGTCCCCTTACGAAACTTTCGTTATTGGGTTAGCCATATACTTCACATGTTTCTAGCGATTCACATGGCATCATCAAATGATACAAGTCTTGGATAAGAATCTACAACGCACTAGAACGCCCTTGTTGACGATCCTTTACTCCGACAGCATCTAGGGTTCCTCGAACAATGTGATATCTCACACCGGGTAAATCCTTAACCCTCCCTCCTCTTACTAATACTACAGAATGTTCTTGTGAATTATGGCCAATACCAGGTATATAAGCAGTGATTTCAAATCCAGAGGTTAATCGTACTCTGGCAACTTTACGTAAGGCAGAGTTTGGTTTTTTGGGGGTGATAGTGGAAAAGTTGACAGATAAGTCACCCTTACTGTCACTCTACAGAACCGTACATGAGATTTTCACCTCATACGGCTCCTCGTTCAATTCTTTCGAAGTAATTGGATCCTTTTCCTCGCTCGAGAATCTCCTCCCTTCTTCCACTCCGTCCCGAGGAGTAACTAGGACCAATTCAGTCGCGTTTTCATGTTCCAATTGAACACTTTCCATTTTTGATTATGATCAAAGGAGAAGATTCTTCTTTTTACCAAACAGATGCGGATCCAATCACGATCTTATATTCTAATAAGAACAAGAGATCTTTCTCGATCAATTCTTTATTTCTATTTTCTCTCCTTCTCTTTTTTTCTTTTTATTCCCTTCCATCATTCCTTAAGTCCCATAGGTTTGATCCTGTAGAATCTGATCCATTTTCTCATCGAGCGAAGGGCACGAAATCAATCAGATTTCTTTTTCGATCAAAACAAAAGTACTATAGTGAGTGTGGTGTGTGAAATCCTCGGTTTTTTCTTATTCCTCTATCCCTATCCCATGGGTACAGCGTTTGAATCAATAGATAACCTTTTCTTCTGTATGAATCGATATTATTACATTCCAATTCCTTCCCGATATCTCCCAAGGAAAATCCCGAATTGAATCCCAAATTGACGGGTTAGTGTGAGCTTATCCATGCGGTTATGCACTCTTCGAATAGGAATCAATTTTCTGAAAGATCCTGGCTTTCGTGCTTTGGTGGGTCGTCCGAGATCCTTTCGATGACCTATGTTGAAGGGATATCTATATGATCCGATCAATTGCGTAAGGCCCGCGGTAGCAACGGAACCGGGGAAAGTCTAGAGAAAAGACAGTTCTTTTCTATTATATTTATTATACTATTATATTAGTTAGTTTAGTTAGTGATCCCGGCTCGGTGAGTCCTTTCTTCCGTGATGAACTGTTGGCACCAGTCCTACATTTTGTCTCTGTGGGCCGAGGAGAAAAGGGGGGGGCTCAGCGGGAAGAGGATTGTACCATGAGAGAACAAGGAGGTCAACCTGATTCAAATATACAACATGGATTCTGGCAATGCAATGTAGTTGGACTCTCATGTCGATCCGAATGAATCAGTCTTTCCACGGACCACGGAGGTAAATCTTTGCCTGCTAGGCAAGAGGGTAGCAAGTTACAAATTCTGTCTCGGTAGGACATGTATTTCTATTATATTAAGTAGTTAATATATTAAGTAGTTAACGGTGGGGTTACCATCATCCTTTTTGTAGTGACGAATCTTGTATGTGTTCCTAAGAAAAGGAATGAGTCCATTTTTCGAGGTCTCAAAAGGGCGTGGAAACGCATAAGAACTCTTGAATGGAAATGGAAAGGAGATGTAGCTCCAGTTCCTCCGGAAATGGTAAGATCTTTGGCGCAAGAAGAACGGGTTGATCCGTATCATCTTGAATGGGTTCTGCTTCCTCTCTTTTTTTTTTAACAATACCGAGTCGGGTTCTTCTCCTACCAGTATCGAATAGAACATGCTGAACAAAATTTTCTTCATGTAAAACCTGCTCGATTTAGATCGGGAAAATCGTACGGATTTTATGAAACCATGTGCTATGGCTCGAATCCGTAGTCAATCCTATTTCCGATAGGATATACGCAGTTGACAATTGAATCCAATTTTTCCCATTATTTCCGTATCCGTAATAGTGCGAAAAGAAGGCCCGGCTCCGAGTTGTTCAGGAATAGTGGAATAGTGGCGTTGAGTTTCTCGACCCTTTGACTTAGGATTAGTCAGTTCTATTTCTCGATAGGTGCAGGGAAGGGATATAACTCAGCGGTAGAGTGTCACCTTGACGTGGTGGAAGTCATCAGTTCGAGCCTGATTATCCCTAAACCCAATGCGAGCCTTTTTATTTTGACTTGCTCCCCCGCCGTGATCGAATGAGAATGGATAAGAGGCTCGTGGGATTGACGTGAGAGGGTAGGAATGGCTATATTGCTGGGAGCGAACTCCAGGCTAATATGAAGCGCACGAATACAAGTTATGCCTTGGGATGAAAGACAATCCCGAATCAGCTTTGTCCACGAAGAAGGAAGCTATAAGTAATGCAACTATGAATCTCATGGAGAGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCATGCTTAACACATGCAAGTCGGACGGGAAGTGGTGTTTCCAGTGGCGGACGGGTGAGTAACGCGTAAGAACCTGCCCTTGGGAGGGGAACAACAACTGGAAACGGCTGCTAATACCCCGTAGGCTGAGGAGCAAAAGGAGGAATCCGCCCAAGGAGGGGCTCGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGTCCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGAAGGCCCACGGGTCGTGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCCGAGGAATAAGCATCGGCTAACTCTGTG
AmTr_v1.0_scaffold02071	Ensembl_Plants	sense_intronic	550	623	.	-	.	ID=gene:ENSRNA049461297	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=GAAAGCCGTATTCGATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCATATCTTTCGAGATCCACCCTAC	AmTr_v1.0_scaffold02071	Ensembl_Plants	LTR	1	3872	14640	+	.	ID=56195	repeat_name=LTR_Al_scaffold_0002_336	repeat_type=LTRs	sequence=GATTAACGAAAATGTGCAAAAGCTCTATTGGCCTCTGCCATTCTATGAGTCTCTTCCTTTTTGCGTATGGCATCGCCGTTCCCTTTGGCAGCATCCACTAATTCGGAACTTAATTTGAAAGCCATATTTCGACCCGGACGTTTTCGGGATGCCCCTAATAACCAACGAATGGCAAGTGCTTTTCCTTGTGTAGATCCTATTTCAATGGGAACTTGATGAGTCGATCCGCCTACACGTCTTGCTTTTACTGCTATATCGGGAGTTACTCCACGTATTGCTTGACGTAAAACAGATAGTGGATTTGTTTCTGTCTTTTGTTGAATCTTTTTCAAGGCTCGATAGATAATTTGATAAGCCAATGATTTTTTTCCGTGTTTCAGAATACGGTTAACCAACATGTTAACTAATCGATTACGATAAATTGGATCGGATTTTGCAGTTTTTTCTTCTGCAGTACCTCGACGTGACATGAGCGCGAAAAAGGTTCAAGAATCAGTTTTATAAGGGCTAAAAACGAATCACTTATTTTGGCTTTTTGACCCCATATTGTAGGGTGGATCTCGAAAGATATGAAAGATCTCCCTCCAAGCCGTACATACGACTTTCATCGAATACGGCTTTCCACAGAATTCTATATGTATCTATGGGATCGAGTATGGAATTCTGTTTACTCACTTTAGATTGAGTATCCGTTTCCCTCCTTTTCTTGCTATGATTGGAAATCCTGTATTTTACATATCCATACGATCGAGTCCTTGGGTTTCCGAAAGAGTGTAAAAAGAAGTGCTTCGAATCATTGCTATTTGACTCGGACCTGTTCTGAAAAAGTCGAGGTATTTCAAATCGTTTGTTGACACGGACAAAGTAAGGGAAAACCTCTGAAATGATTTCAATATTGGACCTTGGACATATAATAGTTCCGAATCTCTTTAGAAAGAAGATCTTTTGTCTCATGGTAGCCTGCTCCAGTCCCCTTACGAAACTTTCGTTATTGGGTTAGCCATATACTTCACATGTTTCTAGCGATTCACATGGCATCATCAAATGATACAAGTCTTGGATAAGAATCTACAACGCACTAGAACGCCCTTGTTGACGATCCTTTACTCCGACAGCATCTAGGGTTCCTCGAACAATGTGATATCTCACACCGGGTAAATCCTTAACCCTCCCTCCTCTTACTAATACTACAGAATGTTCTTGTGAATTATGGCCAATACCAGGTATATAAGCAGTGATTTCAAATCCAGAGGTTAATCGTACTCTGGCAACTTTACGTAAGGCAGAGTTTGGTTTTTTGGGGGTGATAGTGGAAAAGTTGACAGATAAGTCACCCTTACTGTCACTCTACAGAACCGTACATGAGATTTTCACCTCATACGGCTCCTCGTTCAATTCTTTCGAAGTAATTGGATCCTTTTCCTCGCTCGAGAATCTCCTCCCTTCTTCCACTCCGTCCCGAGGAGTAACTAGGACCAATTCAGTCGCGTTTTCATGTTCCAATTGAACACTTTCCATTTTTGATTATGATCAAAGGAGAAGATTCTTCTTTTTACCAAACAGATGCGGATCCAATCACGATCTTATATTCTAATAAGAACAAGAGATCTTTCTCGATCAATTCTTTATTTCTATTTTCTCTCCTTCTCTTTTTTTCTTTTTATTCCCTTCCATCATTCCTTAAGTCCCATAGGTTTGATCCTGTAGAATCTGATCCATTTTCTCATCGAGCGAAGGGCACGAAATCAATCAGATTTCTTTTTCGATCAAAACAAAAGTACTATAGTGAGTGTGGTGTGTGAAATCCTCGGTTTTTTCTTATTCCTCTATCCCTATCCCATGGGTACAGCGTTTGAATCAATAGATAACCTTTTCTTCTGTATGAATCGATATTATTACATTCCAATTCCTTCCCGATATCTCCCAAGGAAAATCCCGAATTGAATCCCAAATTGACGGGTTAGTGTGAGCTTATCCATGCGGTTATGCACTCTTCGAATAGGAATCAATTTTCTGAAAGATCCTGGCTTTCGTGCTTTGGTGGGTCGTCCGAGATCCTTTCGATGACCTATGTTGAAGGGATATCTATATGATCCGATCAATTGCGTAAGGCCCGCGGTAGCAACGGAACCGGGGAAAGTCTAGAGAAAAGACAGTTCTTTTCTATTATATTTATTATACTATTATATTAGTTAGTTTAGTTAGTGATCCCGGCTCGGTGAGTCCTTTCTTCCGTGATGAACTGTTGGCACCAGTCCTACATTTTGTCTCTGTGGGCCGAGGAGAAAAGGGGGGGGCTCAGCGGGAAGAGGATTGTACCATGAGAGAACAAGGAGGTCAACCTGATTCAAATATACAACATGGATTCTGGCAATGCAATGTAGTTGGACTCTCATGTCGATCCGAATGAATCAGTCTTTCCACGGACCACGGAGGTAAATCTTTGCCTGCTAGGCAAGAGGGTAGCAAGTTACAAATTCTGTCTCGGTAGGACATGTATTTCTATTATATTAAGTAGTTAATATATTAAGTAGTTAACGGTGGGGTTACCATCATCCTTTTTGTAGTGACGAATCTTGTATGTGTTCCTAAGAAAAGGAATGAGTCCATTTTTCGAGGTCTCAAAAGGGCGTGGAAACGCATAAGAACTCTTGAATGGAAATGGAAAGGAGATGTAGCTCCAGTTCCTCCGGAAATGGTAAGATCTTTGGCGCAAGAAGAACGGGTTGATCCGTATCATCTTGAATGGGTTCTGCTTCCTCTCTTTTTTTTTTAACAATACCGAGTCGGGTTCTTCTCCTACCAGTATCGAATAGAACATGCTGAACAAAATTTTCTTCATGTAAAACCTGCTCGATTTAGATCGGGAAAATCGTACGGATTTTATGAAACCATGTGCTATGGCTCGAATCCGTAGTCAATCCTATTTCCGATAGGATATACGCAGTTGACAATTGAATCCAATTTTTCCCATTATTTCCGTATCCGTAATAGTGCGAAAAGAAGGCCCGGCTCCGAGTTGTTCAGGAATAGTGGAATAGTGGCGTTGAGTTTCTCGACCCTTTGACTTAGGATTAGTCAGTTCTATTTCTCGATAGGTGCAGGGAAGGGATATAACTCAGCGGTAGAGTGTCACCTTGACGTGGTGGAAGTCATCAGTTCGAGCCTGATTATCCCTAAACCCAATGCGAGCCTTTTTATTTTGACTTGCTCCCCCGCCGTGATCGAATGAGAATGGATAAGAGGCTCGTGGGATTGACGTGAGAGGGTAGGAATGGCTATATTGCTGGGAGCGAACTCCAGGCTAATATGAAGCGCACGAATACAAGTTATGCCTTGGGATGAAAGACAATCCCGAATCAGCTTTGTCCACGAAGAAGGAAGCTATAAGTAATGCAACTATGAATCTCATGGAGAGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCATGCTTAACACATGCAAGTCGGACGGGAAGTGGTGTTTCCAGTGGCGGACGGGTGAGTAACGCGTAAGAACCTGCCCTTGGGAGGGGAACAACAACTGGAAACGGCTGCTAATACCCCGTAGGCTGAGGAGCAAAAGGAGGAATCCGCCCAAGGAGGGGCTCGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGTCCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGAAGGCCCACGGGTCGTGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCCGAGGAATAAGCATCGGCTAACTCTGTG
AmTr_v1.0_scaffold00543	Ensembl_Plants	sense_intronic	11416	11494	.	-	.	ID=gene:ENSRNA049460866	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=AGGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGAATGAGAGAAAGAAGTGAGGAATCCTCTTTTCGACTCTGAC	AmTr_v1.0_scaffold00543	Ensembl_Plants	LTR	9395	12536	25299	+	.	ID=56164	repeat_name=LTR_Al_scaffold_0002_336	repeat_type=LTRs	sequence=GGATGAAATGGTTGTTGCTATCTGCTACAATAACGAATCATTGGTTTAACTGAATAACTAAATAAAATAGATAGACATTTCTCTTCGTCTCAGGTCGACGGATCTTCTCAATTGAAAGATCCCCTATATGGATAATACACATTCCAGTTGACCGACTAATTCTAATTGTTTTGTTCCGAAGCAAAGATATCCACGGAGCGGTTCGTCCTATTCAGATATTCACGACCAAGAATCTCTTTCGGATAGGCCCTGAAAGGAGAAGGGAAGCTGGAATGCCAACAGGCGTCTATTATTGAATTCACCCGACCCGATAGTACCCATTTTGGGAACGTCCAGCGCCAAAGTCACTGAATGGGTAAGTCGCCAATCCCTAAAACGGACTATGTAATGTACTTTATCTGCTGGGTTGGGCATTTTACCAGAGGTTTCTATTGTATCGATCTACCCTTGTGTGATTCCTGTTGAAGCATATACTCGGGGGGTGGGTGCAGGGCGGACGATTTCAAAGCGGACTCCCCATTCATTAGATAGAGAAGATCACCAAGATTTCGTGATCCGCTGCCGAACTTATTCCAATTCAATGAGCATTCTCAATATTCAATATTATGCCTTGAAGAGGACTCGAACCTCCACGCTCTTTAGCACGAGATTTTGAGTCTCGCGTGTCTACCATTTCACCACCAAGGCATCTTGAAAGTGAATCGTATTCCATGAATATGATATCTATCCAGTGTGATGTATGGAATATATGACAAAGGCGGAGTGTTAGAGTATTTCTATTGATCGGTCATGTCATATAGGCCCGAGTCGGACATCCAATTGCTTCGATTTGAATTATCCGGAGGATGCCTTATATTTATATATATTATATCAAAAAGATGGACAATCAAACCTATTTCTCGATTCAATAGAAGCCCAAAGAGGTGAATAGGGTCCCAAATAACGAGAGATATGTAGAAAGCAGGTCCGATTACGCCTATTCCTAATCCTAAATGGAATGTAACGACGTAGGGATCCATATGTAAACATAGTATCTATTTAGATACGCTCGAATGACCCCTTCTCATAATTAGAATGTATATAACCCTATTCCGGTCTGGTCCGGTATGGAATGAACTTATAATCATGGAATCGACTCGATCATCAGATTATCGATTATAAGTTCATAACCCTAGCCCATTCCCCTTTTGGGCGGAACAGATCTACTAATTCTTTGATTCCAGTTAGTAAGAGGGATCTTGAACTAAGAAATAGGTTCTAGAAGCTAAAAAAGGGTATCCTGAGCAATTTCAATAATCGGGTTCATTGATATTCCTGGTATAGTAGATGCTATCACACATACAATCATACTCAATTCGATGGAATTGTTTGATCTTAAAGGGGATCTTCTATAATTTTGCACGTGAGGGGTTATTTCTTGGTTTCGTCCAGTCATTAATAACTTGATTATTTTTAGATAATAGTAGATAGAAACAACGCTCGTAAGGAGTCCTATTGAAACCAAGAAATATAGGCCTGCCTGCCATCCACACCAGAATAAATGAAGTTTTCCGAAAAAACCTGCTAGTGGAGGAAGACCTCCTAAGGATAAGAGACAGAGGGCTAAAGAGAGAGCCAAAAAAGGATCTTTCGTGTATAATCCTGCATAATCTCGAATGTTATCAGTTCCGGTACGTAGACCAAATAATACAATGCAAGCAAAAGTTCCTAGATTCATGGAGATATAGAACAGCATATAAGTTATCATGCTTGCATATCCACCATTTGAGTCTCCAACAATTATTCCAATAATTACATATCCAATTTGACCTATGGACGAATACGCAAGCATACGTTTCATGCTTGTTTGAGTAATAGCAATGAGATTCCCCAATATCATGCTAAGAATAGCTAGGATTTCCAGAAGAAGATGCCATTCGTTTGATGAGAAATAAAAAGGAATATCGAAAATTCGAGTGGCTGAAGCTGAAGCAGCTACTTTCGAAGTAACAGAAAGAAAAGCAACAACTGGAGTGGGAGAGTCAGAGTCGAAAAGAGGATTCCTCACTTCTTTCTCTCATTCAAAACCGTGCATGAGACTTTCATCTCGCACGGCTCCTAAGTGATAAAAGAAAGAAGAACTTATCTTCTTTCTTTTTTGATTACCTTCCTCGCGTATGTATAAGACCGAATCCATTCGATTTCTAAAAAGGATTACTAATCCTTAACTTTTCGAGGAATCCTTCATCAGTGGTTGTGAATGACTGATTTTTCTCAATCTTTTCGACCTTGGTTCCGTAGGAGCAAGTCAGAAAGATTGAGAAATAGAACCATCTGATTTGATTCGTTCTCAATAGACATGAGATGATCATCTTAGGGTGATCCTTTTGTCGACGGATGCTCCTATTACACTCGTAGTCTCTGAAGGATGAGAACCAACTATGTAGCATCTACATCGAGAATTCAAGTATTGTATACGTCATTAGTCCGATCCTTTGCTTTGTAGGAACTACCCGTAATAACGAACTTGCAAAATGAATCTCTTTATGATAAAGAGATTCGTTGTTCCTGACCCTGCTTCACCTTAATTGTTATTTGAACAAGTAAAAGTTATGTCTTGGTCCGAGTGGGGATAGCATTTCTCTTCTGCATGTCCATGGAGTTTTGAAAAATCCAAACATCTCAGAGATAGATAGAGAGGTAGGAATTTATCGAACGAACCGCACTCCTTCGTATACGTCAGGAGTCCATTGATGAGAAGGGGCTGGGGAAAGCTTGAACCCAATTCCTACAGTGATGAATATAAGCGCAATTGAAATTCCTGGGGAGTTATACATTTGTGTATTGATAAGACCATTCACTATTTCTTGAAGCTCGATCTCTCCCCCGGATGAACCATATAGCCAAGAGAAACCATGAACCAGAATAGAAGAGCTTGCCCCACCCATGAGTAAATATTTCATAGTAGCCTCATTAGACCGTACATCTTTCTTGGTATATCCAGATAATAGGTAGGAGCATAAACTGAAACATTCTGGAGCTACAAAGATAGTTATTAAATCGTTAGCACCGCATAAAAACATTCCTCCTAGAGTAGCTGTTAATACGAATAACAGAAACTCCGTTATAGCCATTTCTGTACATTCAATGTACTCTACGGAT
AmTr_v1.0_scaffold00390	Ensembl_Plants	sense_intronic	22653	22763	.	-	.	ID=gene:ENSRNA049460842	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=TTGAGCCGGATGAAAGGAAACTTTCACGTCCGATTTTGAAAGGGGGAGATCCTATAGGATCCTATCCGAATTTTTCTTTTGCTAGGCCCATAGCTAAAAAACCTACTTTCT	AmTr_v1.0_scaffold00390	Ensembl_Plants	LTR/Copia	22693	22768	230	-	.	ID=139160	repeat_name=Bd3_RLC_1	repeat_type=LTRs	sequence=ACTACTTGAGCCGGATGAAAGGAAACTTTCACGTCCGATTTTGAAAGGGGGAGATCCTATAGGATCCTATCCGAA
AmTr_v1.0_scaffold00585	Ensembl_Plants	sense_intronic	2899	2969	.	+	.	ID=gene:ENSRNA049460781	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=TTGAGCCGTACGAGATGAAATTTTCATATACGGTTCTTAGAGGGGGAGTTTTTTGGCTTACCTATCTCAAT	AmTr_v1.0_scaffold00585	Ensembl_Plants	LTR	2892	2944	371	-	.	ID=31269	repeat_name=LTR_Os_chr_11_2029	repeat_type=LTRs	sequence=CCCCCTCTAAGAACCGTATATGAAAATTTCATCTCGTACGGCTCAAACAGAA
AmTr_v1.0_scaffold00334	Ensembl_Plants	sense_intronic	28629	28702	.	+	.	ID=gene:ENSRNA049460734	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=AGGAGCCGTATGAGATGAAAATCTCATGTACGGTTCTGAAACGGAGATTCATTGAATCGAATGACGACCGTAAC	AmTr_v1.0_scaffold00334	Ensembl_Plants	LTR	28034	29882	8587	+	.	ID=80042	repeat_name=LTR_Os_chr_04_669	repeat_type=LTRs	sequence=AGACGCATTATTATTATTTGGGATAGAAAGAAAAAAATTATTTTTAAAAATCTACGCTTGTTAAAGGTGAAGTTTGTAAATAAAACAAGCCCTTCTGTCGTGTATCCCCGATTAATGCAGCCTCAAATGCTTCAATCGTCGATTCTAGAGTATTGAGCGAAAGGTTAAGACCTATGGGTTAGGTCAAACCTACTCGCCTAGTACCAATAGGAGGCACAGAGGAAGAGGCACTACTGCTAGGAATCAACAACACGAAAACTTTGTTATAAATTATCCCTTTTCCTTATTAAGATCGGGGCTAACAAGAATGGTTGGGACAACAAACATCCATCTCGTTCGTGTTTTGGATACCCGTATAATCATCGAAGACTGTTGAAGTGACTAATTCCTGAAAATTAAGAGGCGTTTAAGACAAAGAAATTGCTGGAGTCACCCTTTTTTTATCTAGTACTAACATACTTGATGTTAAAGAAAGATCTTTTCCAAGAAGGTTGGCTAGAGATTTCTTGTAAAAACACTAGCCCCGCTCAGTTTATAATGAGAATATTTCCATTTTTTGGATTCCATGTATTATTTTTATTATGTACATAAAGGAGGAGCCGTATGAGATGAAAATCTCATGTACGGTTCTGAAACGGAGATTCATTGAATCGAATGACGACCGTAACGGATGTCGGCTCAATCCGAAGGAAATTATGCAGAAGCTTTACAGAATTATTATGAAGCTATGCGACTAGAAATTGATCCCTATGATCGAAGTTATATACTCTATAACATAGGCCTTATCCACACAAGAAACGGAGAACATACGAAAGCTTTGGAATATTATTTTCGTGCCCTAGAGCGAAATCCATTCTTACCACAAGCTTTTAATAATATGGCCGTGATCTGTCATTACGTGCGACTATCTCCACTATAGAAATAAAAAGTGAAAAGAAAAAAAAGAGTGAATCCATTAATAAATACTCGAAAAAAAAAAAATAGGTTTTCTACATATGTATCGTCTAAAACAACGATTTTTATCAGCTGTAGCAAAGAAATAAACTTCATAGAATTTGAAAAATGAATCTGAAGAAATAGGTATGCCTAGATACTTTATTCTATGGATAAAAGATCTAATTGATAGAGGAAGCACCGTAAAGATCAATTCGCGAGGTTTTGGGCCGATACAATAAGAACTGCTTATTTATGTCATGATATGACATAAAAGTTAGGAATCAACTTATGTAATAGAGTGGATCCCCTAAGGTATTGAGCAGCGGTGTAGCATCAGATCCCAAAGATAGTAAGCCTTTTCCTTCTTATAATTTTAAGAATTATAAAGGAAAGTCTTTTTCAAGGATTCTATATAAATTTATATATGAAACCGAGATAGTTACCTTTTTATAAAACTCTAATGATAGTGGAAATGCCTATACTTTATGAAGGTGGGAGAAAAGAGAAAACTGATTAAATTATTGACTAAATTAGTAAGCAAAATTCAAGTTTGAAACTCATAACCTCTTTCTTTTGGTTAACTCTAGAAAAAAAAAAATGGGATAAATCCATGAAAAATCCCATTCAATTTGATAAAGGGACACCAAAAGAACTTGACTGCTGAGCCGTATGAGGTCGGAAACTCTCAAGTACGGTTCTAAGGGAAGGAATTTATCCGCCTATTCCGACCGGGGAGAACAAGCCATTCGGCAAGGAGATTCAGAAATTGCGGAGGCTTGGTTCGATCAAGCTGCCGAATATTGGAAACAAGCTCTAGCGCTTACTCCTGGTAATTATATTGAAGCGCAGAATTGGTTGAAGATTACAAGGCGTTTCGAATAAGAACACTTTTTTATTATTTTTTTTATTATT
AmTr_v1.0_scaffold05231	Ensembl_Plants	sense_intronic	297	373	.	-	.	ID=gene:ENSRNA049460692	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=AGGAGCCGTATGAGATGAAAATCTCATGTACGGTTCTGTAGAGTGGCAGTAAGGGTGGCTTATCTGTCAACTTTTCC	AmTr_v1.0_scaffold05231	Ensembl_Plants	LTR	1	480	4097	+	.	ID=56182	repeat_name=LTR_Al_scaffold_0002_336	repeat_type=LTRs	sequence=TTTCTAGCGATTCACATGGCATCATCAAATGATACAAGTCTTGGATAAGAATCTACAACGCACTAGAACGCCCTTGTTGACGATCCTTTACTCCGACAGCATCTAGGGTTCCTCGAACAATGTGATATCTCACACCGGGTAAATCCTTAACCCTTCCCCCTCTTACTAAGACTACAGAATGTTCTTGTAAATTATGGCCAATACCAGGTATATAAGCAGTGATTTCAAATCCAGAGGTTAAGCGTACTCTGGCAACTTTACGTAAGGCAGAGTTTGGTTTTTTGGGGGTGATAGTGGAAAAGTTGACAGATAAGCCACCCTTACTGCCACTCTACAGAACCGTACATGAGATTTTCATCTCATACGGCTCCTCGTTCAATTCTTTTGAAGTCATTGGATCTTTTTCCTCGTTCGAGAACCTCTCCCTTCTTCCACTTCGTTCCGAAGAGTAACTAGGACCAATTCAGTCACGTTTTCAT
AmTr_v1.0_scaffold00172	Ensembl_Plants	sense_intronic	328882	328966	.	+	.	ID=gene:ENSRNA049460323	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=GAAAGCCGTGTGCAATGAAAAATGCAAGCACGGTTTAGGGAGAGATCCTTTTCTCTTATTCAAAGAGTGAGATTATCTACTCCAT	AmTr_v1.0_scaffold00172	Ensembl_Plants	LTR	328863	328931	236	-	.	ID=56115	repeat_name=LTR_Al_scaffold_0002_336	repeat_type=LTRs	sequence=AAGGATCTCTCCCTAAACCGTGCTTGCATTTTTCATTGCACACGGCTTTCCCTATGTATACATCTAAA
AmTr_v1.0_scaffold00102	Ensembl_Plants	sense_intronic	1367019	1367106	.	+	.	ID=gene:ENSRNA049459964	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=GGGAGCCAAATGAATTGAAAGATTCATGTTCGGTTCAGGAAGAGATCATAGAAGTTATGGAATTGATATGGAGACAATCTACTTTCAT	AmTr_v1.0_scaffold00102	Ensembl_Plants	LTR	1366927	1368514	8470	-	.	ID=79857	repeat_name=LTR_Os_chr_04_669	repeat_type=LTRs	sequence=AACAAAGAACTTGATTTAGCGGCTCTTCCCAAAAGTCAGGAATGCAAATAAAAAACATCTCCTGAATAAGCTTCGTGACCAAGCGGTCTTCTTAATAGAAGAGACATTTGACGATAAGCTTGTACTTGTTTAGAGGGATCATCATGAATTATTAAACTATGTCATTCACGGTACGTAAAATATTCAGGCTACTTCTGTGTAAGGAGCGAGGTATTGTAATGCAGCAGGTGAATCCGCCGTTTTAGCTACCACAATAGTGTATTCCATTGCTCCTTGTTCCTGGAAAGTAGTCACTACCTGAGCCATGGAAGATGCTTTTTGACCAATAGCTACATAAACACATATTACATTTTGCCCTTTTTGATTCAGAATAGTATCTGTAGCTACGACTATTTTACCGGTTTGTCTGTCCCCAATAATTAAGTATCGCTGACCGCATCCCATAGGAAGCATGGAATCAATAGTAATAAGACCTGTTTGAAGAGGTTCATATACAAAACATCTCGAAATAATACCTGGTGCGGGGGATTCAATTAACCGAGATTCGGAAGATGAAATTTCAGCTCTCCCATCAATGGGTTTAGCAAGAACATTTATAACACGACCAAAATAAGCCTCTCACTGGTATTTGAGCAATTCTTAATTTTGCTTTTACAGAACTGCCCTCCTGTATCATTAAACCATCACCCATTAATACAACACCAATATTATTGGATTCCAAATTTGGAGCAATGCCTATTGTACTCTCTTCAAATTCTACGAATTCACTCACCATTACTTCATCAAGACCATGAATACAAGCAATGCCATCGCCCACTTGAAGTACAGTACCAATATTGACAATCTTTACTTCTCTATTATATTGTTCAATCCGTTCACGGATAATATTACTAATTTCGTCAGCTCGAATGATTACCATTAGTGCCTCTTAATTCTTTTTCGGAAGCAAAACAAGGAAAACAAAAAAGAAAAAAAAAAAATGCCTATGGTAGTGGTAAACTAATCAGTTATATCTTCATGGTCCCGAGCATGCCAATGTTAGCACTGATGGTGCGTAAATGTAACTCGTTGTTCAAATAACTATTCAGAGTTTCTAGAGCTCCTTGCAAGGCTTGTTGGAAAACTCGTTGTCGGACCTTATTCCTCGCTCTTTGTTGTTCAAAATGAATGCTTTCATTTTTGTAATTTTCTAATCGTTCGAAATTTTCATAAGCAGCATTAATCAAATTCCTTTTTTCTCCTTCTATCTAAGAGTATCCATTCACTTGAAACTCACCTGCTTCAATTTCCAATTTCCGTAAGCGAGCTCGGGCCTTTTCAAGCTGCTCAATGGCTCCCCCACGTAGTTCTTCTGAATTGCGAATTGTACTGAAGATTGTCTGATTTCGATTATCTAATAAATCACTTAATGAAAGTAGATTGTCTCCATATCAATTCCATAACTTCTATGATCTCTTCCTGAACCGAACATGAATCTTTCAATTCATTTGGCTCCCACGCTCAGTTACTTATGGGACACTCCCGTATCTTTTAATGAGCGTACCCTCTCTCTTCGTCTTCTAAGATATCGAAACTGATACAAGACTA
AmTr_v1.0_scaffold00008	Ensembl_Plants	sense_intronic	5253037	5253308	.	+	.	ID=gene:ENSRNA049459038	Name=Intron_gpI	biotype=sense_intronic	description=Group I catalytic intron	sequence=CTGCGGACTTAATTGAATTGAACCTTGGTATGAAAACCTATTAAGTGGTAGCTTCCAAATTCAGAGAAACCTTGGAATGATAAATGGGCAATCCTGAGCCAAATCCTGTTTAAAGAAAACAAGGGTTCCTAGAAAGCGGGAAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCCAACAAATGGAGTTGACCTCGTCGATAGAGGAAGAAATCCATATATAGGACTCCGGAAGGGATGACCCTATGTATTGGTATTGAATTGAAATATTCAA	AmTr_v1.0_scaffold00008	Ensembl_Plants	LTR/Gypsy	5253008	5253221	1222	+	.	ID=143515	repeat_name=LTR_AC188734.2_15331	repeat_type=LTRs	sequence=AAAGGGGATATGGCGCAATTGGTAGATGCTGCGGACTTAATTGAATTGAACCTTGGTATGAAAACCTATTAAGTGGTAGCTTCCAAATTCAGAGAAACCTTGGAATGATAAATGGGCAATCCTGAGCCAAATCCTGTTTAAAGAAAACAAGGGTTCCTAGAAAGCGGGAAGGATAGGTGCAGAGACTCAACGGAAGCTGTTCCAACAAATGGA
AmTr_v1.0_scaffold00052	Ensembl_Plants	sense_intronic	3274614	3274875	.	-	.	ID=gene:ENSRNA049453499	Name=Intron_gpI	biotype=sense_intronic	description=Group I catalytic intron	sequence=CTGCGGAATTAATTGAATCGAGCCTTGGTATGGAAACCTACTAACTGGTAGCGTCCAAATTCAGAGAAACCCTGGAATGAGAAATGGGCGATCTTGAGCCAAATCTTGTCTACAAAAAACAATAATTCCTAGAAAGCGGGAAGTATAGGTTCAGAGACTCAACAAAAGATGTTCCAACAAATGGAGCTGACCTCGTCTATAGAGAAATCATTCTATATATAAGACTCCGGAAGTGATAATCCTATGTATTGGTATGGAATTG	AmTr_v1.0_scaffold00052	Ensembl_Plants	LTR/Gypsy	3274429	3274904	1251	-	.	ID=143500	repeat_name=LTR_AC188734.2_15331	repeat_type=LTRs	sequence=AAAAGGGGATATGGCGAAATTGGTAGACACTGCGGAATTAATTGAATCGAGCCTTGGTATGGAAACCTACTAACTGGTAGCGTCCAAATTCAGAGAAACCCTGGAATGAGAAATGGGCGATCTTGAGCCAAATCTTGTCTACAAAAAACAATAATTCCTAGAAAGCGGGAAGTATAGGTTCAGAGACTCAACAAAAGATGTTCCAACAAATGGAGCTGACCTCGTCTATAGAGAAATCATTCTATATATAAGACTCCGGAAGTGATAATCCTATGTATTGGTATGGAATTGAAATATTCAACAATTAATTACAATTTGGATCCTTTATATTACACATTTCAAAATTATTGTGAATTCATCCCATATTGAAGGAAGAAATATTCATTGATCAAATCATTCACTTCAGAGTCTGATAGATTATTCGAAGAAATGATTGATTGGACGAGAATAAAATAAAGATAGAGTTCCATTCTAC