>ID=gene:ENSRNA049447039;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=23851;repeat_name=L1-1_CR;repeat_type=Type I Transposons/LINE::DS496206:112135-112136(+)
C
>ID=gene:ENSRNA049447039;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=63676;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::DS496206:112145-112237(+)
ACAACTGTTAAAATTGGAAAAATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCAAGAAATGGTTCCAAATGTTT
>ID=gene:ENSRNA049447032;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=63674;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::DS496164:253110-253201(-)
ACAACTGTTAAAATTGGAAAAATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTTCCAAATTGT
>ID=gene:ENSRNA049447012;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=63675;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::DS496171:224314-224406(+)
ACAACTGCTAAAATTGGAAAAATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACATGCACAAATCGAGAAATGGCTCCAAATTGTT
>ID=gene:ENSRNA049446140;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=63677;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::DS496849:3891-3959(-)
CAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTTCCAAATTTTT
>ID=gene:ENSRNA049446333;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=18313;repeat_name=Helitron-1N1_CRe;repeat_type=Unknown::DS496128:1276109-1276110(-)
T
>ID=gene:ENSRNA049446333;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=63672;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::DS496128:1276109-1276177(-)
CAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTTCCAAATTTTT
>ID=gene:ENSRNA049446347;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=63671;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::DS496128:1276291-1276359(-)
CAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTTCCAAATTTTT
>ID=gene:ENSRNA049446355;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=63669;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::DS496128:1568856-1568924(+)
CAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTTCCAAATTTTT
>ID=gene:ENSRNA049446364;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=63670;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::DS496128:1568697-1568765(+)
CAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTTCCAAATTTTT
>ID=gene:ENSRNA049446455;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=63673;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::DS496128:1268997-1269089(+)
ACAACTGTTAAAATTGGAAAAATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCATAAATCGAGAAATGGTTCCAAATTTTT
>ID=gene:ENSRNA049446462;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=63668;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::DS496128:1571769-1571861(-)
ACAACTGTTAAAATTGGAAAAATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTTCCAAATTTTT
>ID=gene:ENSRNA049447217;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=64734;repeat_name=LTR_AC197248.2_9512;repeat_type=LTRs::U03843:13012-13068(+)
ATTAAAGCGGTACGTGATCTGAGTTCAGACCGTCGTGAGACAGGTCGGTTTCTATC
>ID=gene:ENSRNA049447217;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=64736;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::U03843:13424-13570(+)
GGTAATATTCGGAGGATCGGTCAAATGAGAATATTCCGGATGGAAAGCCGAAGGCGAAAGCACCAACATCAGAGTCACTAAAGCTTCAACGCGTAAGTTTGGGTAGCGAACCGGATTAGAGACCCGCAGTAGTCCAAACCGTCAAC
>ID=gene:ENSRNA049447208;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=64734;repeat_name=LTR_AC197248.2_9512;repeat_type=LTRs::U03843:12874-13062(+)
TCAACGGACAAAAGCTACGCTAGGGATAACAGGCTTATCCGCCTTTAGAGTTCCTATCGATGGGCGGGTTTGGCACCTCGATGTTGGATCATCGCGTCCTGTGGCTGAAGGAGGTCGCAAGGGTTGGATTGTTCGTCCATTAAAGCGGTACGTGATCTGAGTTCAGACCGTCGTGAGACAGGTCGGTT
>ID=gene:ENSRNA049446999;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=63212;repeat_name=LTR_Al_scaffold_0003_560;repeat_type=LTRs::DS496160:14402-14482(-)
AGGCTCGTAGATGTGCTGACGTGCAAATCGCTTTTCAGACTTGGGTATAGGGGCGAAAGACTAATCGAACCATCTAGTAG
>ID=gene:ENSRNA049446392;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=63232;repeat_name=LTR_Al_scaffold_0003_561;repeat_type=LTRs::DS496128:1696833-1696933(-)
ACTGACGCGACCAACGAGCCTATCCTTGGCCGAGAGGCCCGGGTAATCTTGTAAACCGCGTCGTGATGGGGATAGATTATTGCAATTATTAGTCTTCAAC
>ID=gene:ENSRNA049446477;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=63233;repeat_name=LTR_Al_scaffold_0003_561;repeat_type=LTRs::DS496128:1695879-1696000(+)
GATTTTCAAGTTGGGCTATTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTGTTAGTTTCTTTTCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTAATCTTGCCTGAGCTCAGGTC
>ID=gene:ENSRNA049446495;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=63232;repeat_name=LTR_Al_scaffold_0003_561;repeat_type=LTRs::DS496128:1696616-1696771(-)
CACCGCCCGTCGCTCCTACCGATTGGGTGAGCTGGTGAAGTGTTCGGATTGAGCTTGGCTGGGGCAACCTGGCCTTGCTTGAGAAGTTCATTAAACCCTCCCACCTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAG
>ID=gene:ENSRNA049446512;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=63303;repeat_name=LTR_Al_scaffold_0183_279;repeat_type=LTRs::DS496128:1694212-1694617(+)
CAGGATAGCTGGAGCTTGATCAGTTTTATCGGGTAAAGCGAATGATTAGAGGTTCGGGGGATGAAACATCCTTCACCTATTCTCAAACTTTAAATAGGTAAGACGTGTCGGTTGCTTAATTGAACCGGCACATTCAATGTGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGATAGTCGAGTTAAGGTGCCAAACTACGCGCTAACCTAGATCCCACAAAGGGTGTTGATTGATATAAACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAATTAGCCCCGAAAATGGATGGCGCTTAAGCGCGTGACCTATACTCGGCCATGGAAGCAAGTGCGACGCTTCCATGAG
>ID=gene:ENSRNA049446890;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=63234;repeat_name=LTR_Al_scaffold_0003_561;repeat_type=LTRs::DS496108:973737-973977(+)
GACTCTAGTCCGACTTTGTGAAATAACTTAAGAGGTGTAGAATAAGTGGGAGCTTCGGCGACGGTGAAATACCACTACTTTTAACGTTGTTTTACTTATTCCATTACTTGGAGGCGGGACTCTGTCCCTGCTTCTAGCTCTAAGACGGCTTTTGCACGTCGATCCAGGTGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAG
>ID=gene:ENSRNA049446962;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=63212;repeat_name=LTR_Al_scaffold_0003_560;repeat_type=LTRs::DS496160:13911-14398(-)
TTCCCTCCGAAGTTTCCCCCAGGATAGCTGGAGCTTGATCAGTTTTATCGGGTAAAGCGAATGATTAGAGGTTCGGGGGATGAAACATCCTTCACCTATTCTCAAACTTTAAATAGGTAAGACGTGTCGGTTGCTTAATTGAACCGGCACATTCAATGTGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGATAGTCGAGTTAAGGTGCCAAACTACGCGCTAACCTAGATCCCACAAAGGGTGTTGATTGATATAAACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAATTAGCCCCGAAAATGGATGGCGCTTAAGCGCGTGACCTATACTCGGCCATGGAAGCAAGTGCGACGCTTCCATGAGTAGGAGGGCGTGGGTGTCGAGACTAAGCCTCTGGCGTGAGCCTGGGTGAATCGGCATCTAGTG
>ID=gene:ENSRNA049446981;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=63212;repeat_name=LTR_Al_scaffold_0003_560;repeat_type=LTRs::DS496160:13737-13858(-)
GGAGAAAGGTTCCATGTGAACAGCAATTGGACATGGGTTAGTCGATCCTAAGAGATGGGGTAATCCTGTGTGAAGAGCGCGATTCGCGCTGCCCATCGAAAGGGAAAAGGGTTAAGATTCC
>ID=gene:ENSRNA049437090;Name=tRNA-Ile;biotype=tRNA;description=tRNA-Ile for anticodon AAU overlaps with ID=64350;repeat_name=LTR_Al_scaffold_0002_362;repeat_type=LTRs::DS496135:1039949-1040023(-)
GGCCCCTTAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCATCGGTTCGATCCCGATAGGGGCCA
>ID=gene:ENSRNA049437104;Name=tRNA-Ile;biotype=tRNA;description=tRNA-Ile for anticodon AAU overlaps with ID=64351;repeat_name=LTR_Al_scaffold_0002_362;repeat_type=LTRs::DS496135:1040239-1040313(+)
GGCCCCTTAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCATCGGTTCGATCCCGATAGGGGCCA
>ID=gene:ENSRNA049435117;Name=tRNA-Lys;biotype=tRNA;description=tRNA-Lys for anticodon CUU overlaps with ID=64439;repeat_name=LTR_AC183412.5_672;repeat_type=LTRs::DS496143:724471-724544(+)
GCCCGGTTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACATTGGGCG
>ID=gene:ENSRNA049435136;Name=tRNA-Lys;biotype=tRNA;description=tRNA-Lys for anticodon CUU overlaps with ID=64438;repeat_name=LTR_AC183412.5_672;repeat_type=LTRs::DS496143:723277-723350(+)
GCCCGGTTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACATTGGGCG
>ID=gene:ENSRNA049435725;Name=tRNA-Ser;biotype=tRNA;description=tRNA-Ser for anticodon AGA overlaps with ID=62038;repeat_name=LTR_Al_scaffold_0001_223;repeat_type=LTRs::DS496115:751099-751180(-)
GCGGTCGTGCCCGAGTGGTTAAGGGGACTGACTAGAAATCAGTTGGGATCTCCCGCATAGGTTCGAATCCTGTCGACCGCG
>ID=gene:ENSRNA049435745;Name=tRNA-Ser;biotype=tRNA;description=tRNA-Ser for anticodon AGA overlaps with ID=62039;repeat_name=LTR_Al_scaffold_0001_223;repeat_type=LTRs::DS496115:747456-747537(+)
GCGGTCGTGCCCGAGTGGTTAAGGGGACTGACTAGAAATCAGTTGGGATCTCCCGCATAGGTTCGAATCCTGTCGACCGCG
>ID=gene:ENSRNA049437210;Name=tRNA-Asp;biotype=tRNA;description=tRNA-Asp for anticodon GUC overlaps with ID=63766;repeat_name=LTR_Gr_chr_11_2758;repeat_type=LTRs::DS496108:1148610-1148682(+)
GTCGTCATCGTATAGTGGTCAGTATCCCTGCCTGTCACGCAGGAGGCCGGGGTTCGATTCCCCGTGACGGCG
>ID=gene:ENSRNA049434296;Name=tRNA-Ile;biotype=tRNA;description=tRNA-Ile for anticodon GAU overlaps with ID=64357;repeat_name=LTR_Al_scaffold_0002_362;repeat_type=LTRs::BK000554:41186-41260(+)
GGGCTATTAGCTCAGTTGGTTAGAGCGTTGCTTTGATAAGGCAAAAGTCGAAAGTTCAAATCTTTCATAGCCCA
>ID=gene:ENSRNA049435794;Name=tRNA-Pro;biotype=tRNA;description=tRNA-Pro for anticodon CGG overlaps with ID=49878;repeat_name=LTR_Gr_chr_12_2845;repeat_type=LTRs::DS496112:2337069-2337141(-)
GGGAGTTTGGTCTAGTGGTATGATTCTCGCTTCGGGTGCGAGAGGTCACGGGTTCGATTCCCGTAACTCCCC
>ID=gene:ENSRNA049435833;Name=tRNA-Pro;biotype=tRNA;description=tRNA-Pro for anticodon CGG overlaps with ID=49874;repeat_name=LTR_Gr_chr_12_2845;repeat_type=LTRs::DS496112:2348650-2348722(+)
GGGAGTTTGGTCTAGTGGTATGATTCTCGCTTCGGGTGCGAGAGGTCACGGGTTCGATTCCCGTAACTCCCC
>ID=gene:ENSRNA049435915;Name=tRNA-Tyr;biotype=tRNA;description=tRNA-Tyr for anticodon GUA overlaps with ID=62040;repeat_name=LTR_Al_scaffold_0001_223;repeat_type=LTRs::DS496113:1656990-1657081(+)
CTCTCCATAGCTCAGCTGGAAGAGCGAAGGACTGTAATCGATGATACATGAAGACATCCTTAGGTCGCCCGTTCGATCCGGGCTGGGGAGA
>ID=gene:ENSRNA049435928;Name=tRNA-Tyr;biotype=tRNA;description=tRNA-Tyr for anticodon GUA overlaps with ID=62041;repeat_name=LTR_Al_scaffold_0001_223;repeat_type=LTRs::DS496113:1656814-1656905(+)
CTCTCCATAGCTCAGCTGGAAGAGCGAAGGACTGTAATCGATGATACATGAAGACATCCTTAGGTCGCCCGTTCGATCCGGGCTGGGGAGA
>ID=gene:ENSRNA049434573;Name=tRNA-Ile;biotype=tRNA;description=tRNA-Ile for anticodon AAU overlaps with ID=64356;repeat_name=LTR_Al_scaffold_0002_362;repeat_type=LTRs::DS496183:251703-251777(+)
GGCTTGTTAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCATCGGTTCGATCCCGATACGAGCCA
>ID=gene:ENSRNA049434820;Name=tRNA-Ile;biotype=tRNA;description=tRNA-Ile for anticodon AAU overlaps with ID=64355;repeat_name=LTR_Al_scaffold_0002_362;repeat_type=LTRs::DS496193:95365-95439(-)
GGCCTGTTAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCATCGGTTCGATCCCGATACGGGCCA
>ID=gene:ENSRNA049434833;Name=tRNA-Ile;biotype=tRNA;description=tRNA-Ile for anticodon AAU overlaps with ID=64354;repeat_name=LTR_Al_scaffold_0002_362;repeat_type=LTRs::DS496193:94643-94717(+)
GGCCTGTTAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCATCGGTTCGATCCCGATACGGGCCA
>ID=gene:ENSRNA049434841;Name=tRNA-Ile;biotype=tRNA;description=tRNA-Ile for anticodon AAU overlaps with ID=64353;repeat_name=LTR_Al_scaffold_0002_362;repeat_type=LTRs::DS496193:93394-93468(+)
GGCCTGTTAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCATCGGTTCGATCCCGATACGGGCCA
>ID=gene:ENSRNA049434858;Name=tRNA-Ile;biotype=tRNA;description=tRNA-Ile for anticodon AAU overlaps with ID=64352;repeat_name=LTR_Al_scaffold_0002_362;repeat_type=LTRs::DS496193:73245-73319(+)
GGCCTGTTAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCATCGGTTCGATCCCGATACGGGCCA
>ID=gene:ENSRNA049436459;Name=tRNA-Asp;biotype=tRNA;description=tRNA-Asp for anticodon GUC overlaps with ID=64787;repeat_name=LTR_AC190975.3_7128;repeat_type=LTRs::DS497267:2510-2584(-)
GGAGTGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCACTCCG
>ID=gene:ENSRNA049434239;Name=tRNA-Ile;biotype=tRNA;description=tRNA-Ile for anticodon GAU overlaps with ID=64358;repeat_name=LTR_Al_scaffold_0002_362;repeat_type=LTRs::BK000554:152942-153016(-)
GGGCTATTAGCTCAGTTGGTTAGAGCGTTGCTTTGATAAGGCAAAAGTCGAAAGTTCAAATCTTTCATAGCCCA
>ID=gene:ENSRNA049434210;Name=tRNA-Asp;biotype=tRNA;description=tRNA-Asp for anticodon GUC overlaps with ID=64784;repeat_name=LTR_AC190975.3_7128;repeat_type=LTRs::BK000554:82586-82660(-)
GGGATTGTAGTTCAATTGGTTAGAGCACCGCCCTGTCACGGCGGAAGTTGCGGGTTCGAGTCCCGTCAATCCCG
>ID=gene:ENSRNA049446302;Name=mir-598;biotype=pre_miRNA;description=microRNA mir-598 overlaps with ID=18907;repeat_name=Copia2-I_CR;repeat_type=LTRs::DS496136:1196278-1196307(-)
TGCTGCTGCTCCTGCTGCTGCTGCCGTTG
>ID=gene:ENSRNA049446302;Name=mir-598;biotype=pre_miRNA;description=microRNA mir-598 overlaps with ID=41136;repeat_name=LTR_Sb_chr_03_397;repeat_type=LTRs::DS496136:1196211-1196251(-)
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
>ID=gene:ENSRNA049446302;Name=mir-598;biotype=pre_miRNA;description=microRNA mir-598 overlaps with ID=45280;repeat_name=LTR_Sb_chr_03_385;repeat_type=LTRs::DS496136:1196254-1196307(-)
TGCTGCTGCTCCTGCTGCTGCTGCCGTTGCTGCTGCTCCTGCTGTTCCTGTTG
>ID=gene:ENSRNA049446302;Name=mir-598;biotype=pre_miRNA;description=microRNA mir-598 overlaps with ID=54556;repeat_name=LTR_Sb1_00020_927;repeat_type=LTRs::DS496136:1196211-1196307(-)
TGCTGCTGCTCCTGCTGCTGCTGCCGTTGCTGCTGCTCCTGCTGTTCCTGTTGGAAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
>ID=gene:ENSRNA049447096;Name=IsrR;biotype=antisense_RNA;description=Antisense RNA which regulates isiA expression overlaps with ID=64844;repeat_name=LTR_Gr_chr_04_953;repeat_type=LTRs::BK000554:187438-187625(-)
GGTAACCAAAAATAACAGCAGCATTTGTTGTTGGGTTAGTAATAACACGAACGTCACCACCACCTGGAGCCCAAGTATCGTAAACACCACCAAAGTACATAGCTTTCCAAACAAGTAACCATGCACCTAAGCCTAACATGATAAGGTGGTAACCTAAAATGTTAGTCATTTTGTTTTTGTCTTTCCA
>ID=gene:ENSRNA049447137;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=64800;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::BK000554:71493-71505(-)
ATGTACTTCCAT
>ID=gene:ENSRNA049447127;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=64812;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::BK000554:174384-174387(-)
GAC
