5	Ensembl_Plants	snRNA	13162500	13162696	.	-	.	ID=gene:ENSRNA049466917	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATGTGCCTACTTCGATATTAAATTTATTTTTTGTGGGGGAGGGTCCGCCACAGTGGCTTGCCACTGGGGCTCTCGCCTGTCGCCCAGGCGTTGCACTACAGCCTGGGCCTGGCGCACCCCAA	5	Ensembl_Plants	LTR/Gypsy	13162633	13162690	423	-	.	ID=19526	repeat_name=Os1_13_1L	repeat_type=LTRs	sequence=TTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCT
5	Ensembl_Plants	snRNA	13162500	13162696	.	-	.	ID=gene:ENSRNA049466917	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATGTGCCTACTTCGATATTAAATTTATTTTTTGTGGGGGAGGGTCCGCCACAGTGGCTTGCCACTGGGGCTCTCGCCTGTCGCCCAGGCGTTGCACTACAGCCTGGGCCTGGCGCACCCCAA	5	Ensembl_Plants	LTR/Gypsy	13162591	13162661	282	-	.	ID=19540	repeat_name=ATLANTYS-I_OS	repeat_type=LTRs	sequence=AGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATGTGCCTACTTCGATATTAAATTTATTTT
5	Ensembl_Plants	snRNA	13162500	13162696	.	-	.	ID=gene:ENSRNA049466917	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATGTGCCTACTTCGATATTAAATTTATTTTTTGTGGGGGAGGGTCCGCCACAGTGGCTTGCCACTGGGGCTCTCGCCTGTCGCCCAGGCGTTGCACTACAGCCTGGGCCTGGCGCACCCCAA	5	Ensembl_Plants	LTR	13162625	13162691	287	-	.	ID=267222	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=TTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTG
7	Ensembl_Plants	snRNA	1601805	1601891	.	-	.	ID=gene:ENSRNA049466790	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTTTTCGGAGACACCCGATAAAATTGGAACGACATGGCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTTCAAATTTTT	7	Ensembl_Plants	LTR	1601803	1601893	411	-	.	ID=298418	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TTGTCTTTTCGGAGACACCCGATAAAATTGGAACGACATGGCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTTCAAATTTTTT
super0207	Ensembl_Plants	snRNA	14834	15026	.	-	.	ID=gene:ENSRNA049467220	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATCGCTTCTCGGCCTTTTGGCTAAGATCAAAGTGTAGTATCTGTTCTTATCAGCTTAATATCTGGTACATACCGCATTGCGGTATCAGTATATTAAACTGATTTTTGGAACTCGGTGGAGTGTTCGGTGCTTGCACCACCTCCGCCACGGGTTGTCCGGGCATTGCAGTGCCGCCCGGTTCGGCCCACCATAA	super0207	Ensembl_Plants	LTR/Gypsy	14839	15026	699	-	.	ID=19535	repeat_name=Os1_13_1L	repeat_type=LTRs	sequence=ATCGCTTCTCGGCCTTTTGGCTAAGATCAAAGTGTAGTATCTGTTCTTATCAGCTTAATATCTGGTACATACCGCATTGCGGTATCAGTATATTAAACTGATTTTTGGAACTCGGTGGAGTGTTCGGTGCTTGCACCACCTCCGCCACGGGTTGTCCGGGCATTGCAGTGCCGCCCGGTTCGGCCCA
super0207	Ensembl_Plants	snRNA	14834	15026	.	-	.	ID=gene:ENSRNA049467220	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATCGCTTCTCGGCCTTTTGGCTAAGATCAAAGTGTAGTATCTGTTCTTATCAGCTTAATATCTGGTACATACCGCATTGCGGTATCAGTATATTAAACTGATTTTTGGAACTCGGTGGAGTGTTCGGTGCTTGCACCACCTCCGCCACGGGTTGTCCGGGCATTGCAGTGCCGCCCGGTTCGGCCCACCATAA	super0207	Ensembl_Plants	LTR/Gypsy	14999	15030	232	-	.	ID=19547	repeat_name=ATLANTYS-I_OS	repeat_type=LTRs	sequence=AGTTATCGCTTCTCGGCCTTTTGGCTAAGAT
JH370046.2	Ensembl_Plants	snRNA	12112	12208	.	-	.	ID=gene:ENSRNA049467108	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTCGGAGACATCCGATAAAATTGGAACGATACAGAGAAGATCGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTT	JH370046.2	Ensembl_Plants	LTR	12100	12209	570	-	.	ID=298464	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TGTCTCTTCGGAGACATCCGATAAAATTGGAACGATACAGAGAAGATCGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTTTGGATATTCTG
2	Ensembl_Plants	snRNA	26031322	26031513	.	-	.	ID=gene:ENSRNA049466507	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTATCTGTTTTTATCAGTTTAATATTTGATATTTGATACGTGGGCTATGTGCTCACTGTGATATTAAATTTATTTTTTATGGGAGAGAGCCGATCACATTGGCTTGCCAAGTCGTTGCACTGCTGTCCTGGCCTGGCGCACCCCAGTCAAAACAACGTTTA	2	Ensembl_Plants	LTR/Gypsy	26031455	26031507	284	-	.	ID=19522	repeat_name=Os1_13_1L	repeat_type=LTRs	sequence=TTCTCGGCCTTTTGGCTAAGATCAAGTATCTGTTTTTATCAGTTTAATATTT
2	Ensembl_Plants	snRNA	26179267	26179463	.	+	.	ID=gene:ENSRNA049466465	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATGTGTCCACTGTGATATTAAATTTATTTTTTGTGGGGAAGGACCCACTACATTGGCTTGCCAATGGGGTCCTCACGCGTTGCCTAGGCGTTGCACTGCTGCCTGGGCCTGGCGCACCCCAA	2	Ensembl_Plants	LTR/Gypsy	26179273	26179372	405	+	.	ID=19525	repeat_name=Os1_13_1L	repeat_type=LTRs	sequence=TCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATGTGTCCACTGTGATATTAAATTTATTTTT
2	Ensembl_Plants	snRNA	26179267	26179463	.	+	.	ID=gene:ENSRNA049466465	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATGTGTCCACTGTGATATTAAATTTATTTTTTGTGGGGAAGGACCCACTACATTGGCTTGCCAATGGGGTCCTCACGCGTTGCCTAGGCGTTGCACTGCTGCCTGGGCCTGGCGCACCCCAA	2	Ensembl_Plants	LTR/Gypsy	26179302	26179478	359	+	.	ID=19539	repeat_name=ATLANTYS-I_OS	repeat_type=LTRs	sequence=GTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATGTGTCCACTGTGATATTAAATTTATTTTTTGTGGGGAAGGACCCACTACATTGGCTTGCCAATGGGGTCCTCACGCGTTGCCTAGGCGTTGCACTGCTGCCTGGGCCTGGCGCACCCCAACGAAAACATTTTAAA
2	Ensembl_Plants	snRNA	26179267	26179463	.	+	.	ID=gene:ENSRNA049466465	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATGTGTCCACTGTGATATTAAATTTATTTTTTGTGGGGAAGGACCCACTACATTGGCTTGCCAATGGGGTCCTCACGCGTTGCCTAGGCGTTGCACTGCTGCCTGGGCCTGGCGCACCCCAA	2	Ensembl_Plants	LTR	26179272	26179338	287	+	.	ID=267211	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=TTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGG
6	Ensembl_Plants	snRNA	19156291	19156406	.	+	.	ID=gene:ENSRNA049465969	Name=U5	biotype=snRNA	description=U5 spliceosomal RNA	sequence=AGCTGCGTGGTGAGCACAAAGCGAACTATTCATTCGCCTTTTACTAAAGAATACCGTGTGCACGTCATAAATAGCAGCATACTATTTTTGGAGGGTGTTTTCTCTTTTGAGATTAT	6	Ensembl_Plants	LTR	19156293	19156384	508	+	.	ID=267216	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=TGCGTGGTGAGCACAAAGCGAACTATTCATTCGCCTTTTACTAAAGAATACCGTGTGCACGTCATAAATAGCAGCATACTATTTTTGGAGG
6	Ensembl_Plants	snRNA	19490185	19490296	.	-	.	ID=gene:ENSRNA049465932	Name=U5	biotype=snRNA	description=U5 spliceosomal RNA	sequence=AGCTGCGTGGTGAGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGGGCATGCCACAAATAGTAGCATACTATTATTTTTGGAGGGTGTTTATAACGCCC	6	Ensembl_Plants	LTR	19490200	19490294	457	-	.	ID=267215	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=CTGCGTGGTGAGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGGGCATGCCACAAATAGTAGCATACTATTATTTTTGGAG
7	Ensembl_Plants	snRNA	15270466	15270662	.	-	.	ID=gene:ENSRNA049465552	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTGGACCATGTGTCCACTTTGATATTAAATTTATTTTTTGTGGGGGAGGGCTCACCATCGTGGCTTGCCACTAGAGCTCTCGAGCGTCGCTTTGGCGTTGCACTACAGCCTTAGCCTGGCGCACCCCAA	7	Ensembl_Plants	LTR/Gypsy	15270567	15270656	409	-	.	ID=19531	repeat_name=Os1_13_1L	repeat_type=LTRs	sequence=TTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTGGACCATGTGTCCACTTTGATATTA
7	Ensembl_Plants	snRNA	15270466	15270662	.	-	.	ID=gene:ENSRNA049465552	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTGGACCATGTGTCCACTTTGATATTAAATTTATTTTTTGTGGGGGAGGGCTCACCATCGTGGCTTGCCACTAGAGCTCTCGAGCGTCGCTTTGGCGTTGCACTACAGCCTTAGCCTGGCGCACCCCAA	7	Ensembl_Plants	LTR/Gypsy	15270557	15270627	260	-	.	ID=19544	repeat_name=ATLANTYS-I_OS	repeat_type=LTRs	sequence=AGTATCTGTTCTTATCAGTTTAATATCTGATACGTGGACCATGTGTCCACTTTGATATTAAATTTATTTT
7	Ensembl_Plants	snRNA	14487561	14487757	.	-	.	ID=gene:ENSRNA049465562	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATGTGCCCACTTCGATATTAAATTTATTTTTTGTGGGGGAGGGTCCACAACAGTGGCTTGCCCCTGGGGCCCTCGCGTGTCGCCCGGGCGTTGCACTACAGCCCGGGCCTGGCGCACCCCAA	7	Ensembl_Plants	LTR/Gypsy	14487694	14487751	423	-	.	ID=19528	repeat_name=Os1_13_1L	repeat_type=LTRs	sequence=TTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCT
7	Ensembl_Plants	snRNA	14487561	14487757	.	-	.	ID=gene:ENSRNA049465562	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATGTGCCCACTTCGATATTAAATTTATTTTTTGTGGGGGAGGGTCCACAACAGTGGCTTGCCCCTGGGGCCCTCGCGTGTCGCCCGGGCGTTGCACTACAGCCCGGGCCTGGCGCACCCCAA	7	Ensembl_Plants	LTR/Gypsy	14487581	14487722	297	-	.	ID=19543	repeat_name=ATLANTYS-I_OS	repeat_type=LTRs	sequence=AGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATGTGCCCACTTCGATATTAAATTTATTTTTTGTGGGGGAGGGTCCACAACAGTGGCTTGCCCCTGGGGCCCTCGCGTGTCGCCCGGGCGTTGCACTACAG
7	Ensembl_Plants	snRNA	18121698	18121894	.	+	.	ID=gene:ENSRNA049465581	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATATGAGGTATATCCTCATGTGATATTAAATTTATTTTTTTAGGGGAGGACTGTCATCATAGTGGCTTGCCGCTAGAACACTCTTGTGTTGCCTTGGTGTTGCACTATCGTCGAGGCTTGGCACACCCCAA	7	Ensembl_Plants	LTR/Gypsy	18121704	18121889	414	+	.	ID=19532	repeat_name=Os1_13_1L	repeat_type=LTRs	sequence=TCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATATGAGGTATATCCTCATGTGATATTAAATTTATTTTTTTAGGGGAGGACTGTCATCATAGTGGCTTGCCGCTAGAACACTCTTGTGTTGCCTTGGTGTTGCACTATCGTCGAGGCTTGGCACAC
7	Ensembl_Plants	snRNA	15269216	15269417	.	-	.	ID=gene:ENSRNA049465595	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCTGCCTTTTGGCTAACATCAAGCGTAGTATCTGTTTTTATTAGTTTAATATCTGATATATGGACCATGTGTCCACTTTGATATTAATTTATTTTTTGTGGGGAAGAACTCACCACCGTGGCTTGCCACTAGAGTTCGAGTTCTCGAGCGTTGCTTTGGCGTTGCAGTACAGCCTTAGCCCAGTTTCACTTTG	7	Ensembl_Plants	LTR/Gypsy	15269311	15269411	276	-	.	ID=19530	repeat_name=Os1_13_1L	repeat_type=LTRs	sequence=TTCTCTGCCTTTTGGCTAACATCAAGCGTAGTATCTGTTTTTATTAGTTTAATATCTGATATATGGACCATGTGTCCACTTTGATATTAATTTATTTTTT
7	Ensembl_Plants	snRNA	16046387	16046504	.	-	.	ID=gene:ENSRNA049465668	Name=U5	biotype=snRNA	description=U5 spliceosomal RNA	sequence=AGCTGCGTGGTGAGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCGCGCCACATTAAGCAGCATACGCTAGTTTTTGGAGGGTCCTCTCTCTTTAAGAGGGC	7	Ensembl_Plants	LTR	16046403	16046507	601	-	.	ID=267214	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=CGCAGCTGCGTGGTGAGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCGCGCCACATTAAGCAGCATACGCTAGTTTTTGGAGGGTCC
10	Ensembl_Plants	snRNA	1475709	1475905	.	+	.	ID=gene:ENSRNA049466093	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATGTGCCTACTGTGATATTAAATTTATTTTTTGTGGGGGAGGGCCCTCTACATTGGCTTGCCAATGGGGTCTTCACGTGTCGCCCAGGCGTTGCACTGTTGTCTGGGCCTGGCACACCCCAA	10	Ensembl_Plants	LTR/Gypsy	1475715	1475772	394	+	.	ID=19534	repeat_name=Os1_13_1L	repeat_type=LTRs	sequence=TCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTG
10	Ensembl_Plants	snRNA	1475709	1475905	.	+	.	ID=gene:ENSRNA049466093	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATGTGCCTACTGTGATATTAAATTTATTTTTTGTGGGGGAGGGCCCTCTACATTGGCTTGCCAATGGGGTCTTCACGTGTCGCCCAGGCGTTGCACTGTTGTCTGGGCCTGGCACACCCCAA	10	Ensembl_Plants	LTR/Gypsy	1475744	1475782	264	+	.	ID=19546	repeat_name=ATLANTYS-I_OS	repeat_type=LTRs	sequence=GTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGC
6	Ensembl_Plants	snRNA	19152565	19152675	.	+	.	ID=gene:ENSRNA049465947	Name=U5	biotype=snRNA	description=U5 spliceosomal RNA	sequence=AGCTGCGTGGTGAGCACAAAGCGAATTATTCTTTCGCCTTTTACTAAAGAATAACGTGTGCGCGTCATAAATAGCAGCATACTCTTATTTTGAAATTCAAAATGTTAGAAT	6	Ensembl_Plants	LTR	19152567	19152655	521	+	.	ID=267217	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=TGCGTGGTGAGCACAAAGCGAATTATTCTTTCGCCTTTTACTAAAGAATAACGTGTGCGCGTCATAAATAGCAGCATACTCTTATTTT
4	Ensembl_Plants	snRNA	18042000	18042117	.	+	.	ID=gene:ENSRNA049465269	Name=U5	biotype=snRNA	description=U5 spliceosomal RNA	sequence=AGCTGCGCGGTGAGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCGCGCCGCAAATAGCAGCATACGCTAATTTTTATAGGGATCCTTCTAATAAGAAGGAC	4	Ensembl_Plants	LTR	18041997	18042104	513	+	.	ID=267210	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=GCAGCTGCGCGGTGAGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCGCGCCGCAAATAGCAGCATACGCTAATTTTTATAGGGATCCTTC
3	Ensembl_Plants	snRNA	8791380	8791531	.	-	.	ID=gene:ENSRNA049464797	Name=U4	biotype=snRNA	description=U4 spliceosomal RNA	sequence=ATCTTTGCGCTTGGGGCAATGACGCAGCTAGTGAGGTAATACCGAGGCGCGTCAATTGCTGGTTGAAAACTATTTCCAAACCCCCTCTTTGGCCCACCCGGGCCACTGAGAATTTCTGGAAGGGCTCCCTCTCCCTCGGGGAGGGTAAAGCC	3	Ensembl_Plants	MITE/MITE	8791448	8791532	273	-	.	ID=198205	repeat_name=Rufi_MITE1425	repeat_type=Unknown	sequence=CATCTTTGCGCTTGGGGCAATGACGCAGCTAGTGAGGTAATACCGAGGCGCGTCAATTGCTGGTTGAAAACTATTTCCAAACCC
3	Ensembl_Plants	snRNA	1427613	1427795	.	-	.	ID=gene:ENSRNA049464846	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=ATACTTACCTGGACGGGGTCGACGGGCGATCAGGAAGGTCCGTGGTCTAGATCAATGGCTCACATTGCACTTGGTGAGCGCGATGATTGCACTTGGTGAGCGCGATGGTTTACCATCTCCCCAGGTGGGAGAGTGGACGTCATAATTTGTGGCAAAGGGGGTACGCGTTCGCGCGGCCCCTGC	3	Ensembl_Plants	LTR	1427607	1427808	504	-	.	ID=238539	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=GCATCGTTGCAACATACTTACCTGGACGGGGTCGACGGGCGATCAGGAAGGTCCGTGGTCTAGATCAATGGCTCACATTGCACTTGGTGAGCGCGATGATTGCACTTGGTGAGCGCGATGGTTTACCATCTCCCCAGGTGGGAGAGTGGACGTCATAATTTGTGGCAAAGGGGGTACGCGTTCGCGCGGCCCCTGCTAATT
3	Ensembl_Plants	snRNA	1424409	1424569	.	-	.	ID=gene:ENSRNA049464857	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=ATACTTACCTGGACGGGGTCAACGGGCGATCAGGAAGGTTCGTGGCCTAGATCACTGGCTCACATTGCACTCGGTGAGCGCGTTGGTTTGCCATCTCCCCAAGTGGGAGAGTGGACGTCGTAATTTGTGGCAGAGGGGGTACGCGTTCGCGCGGCCCCAAC	3	Ensembl_Plants	LTR	1424404	1424582	615	-	.	ID=238541	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=GCATCGTTGTAACATACTTACCTGGACGGGGTCAACGGGCGATCAGGAAGGTTCGTGGCCTAGATCACTGGCTCACATTGCACTCGGTGAGCGCGTTGGTTTGCCATCTCCCCAAGTGGGAGAGTGGACGTCGTAATTTGTGGCAGAGGGGGTACGCGTTCGCGCGGCCCCAACCAAT
3	Ensembl_Plants	snRNA	1425540	1425700	.	-	.	ID=gene:ENSRNA049464866	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=ATACTTACCTGGACGGGGTCGACGGGCGATCAGCAAGGCCCGTGGCCTAGATCAATGGCTTACATTGCACTTGGTGAGCGCGTTGGTTTACCATCTCCCCAAGTGGGAGAGTGGACGTCATAATTTGTGGTAGAGGGGGTACGCGTTCGCGCGGCCCCTGC	3	Ensembl_Plants	LTR	1425535	1425713	727	-	.	ID=238540	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=GCATCGTTGCAACATACTTACCTGGACGGGGTCGACGGGCGATCAGCAAGGCCCGTGGCCTAGATCAATGGCTTACATTGCACTTGGTGAGCGCGTTGGTTTACCATCTCCCCAAGTGGGAGAGTGGACGTCATAATTTGTGGTAGAGGGGGTACGCGTTCGCGCGGCCCCTGCCAAT
3	Ensembl_Plants	snRNA	1607922	1608082	.	-	.	ID=gene:ENSRNA049464879	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=ATACTTACCTGGACGGGGTCGACGGGCGATCAAGAAGGCCCGTGGCCTAGATCAAATGCTCACATTGCACTTGGTGAGCGCGTTGGTTTACCATCTCCCCAAGTGGGAGAGTGGACGTCATAATTTGTGGTAGAGGGGGTACGCGTTCGCGCGGCCCCTGC	3	Ensembl_Plants	LTR	1607917	1608095	748	-	.	ID=238538	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=GCATCGTTGCAACATACTTACCTGGACGGGGTCGACGGGCGATCAAGAAGGCCCGTGGCCTAGATCAAATGCTCACATTGCACTTGGTGAGCGCGTTGGTTTACCATCTCCCCAAGTGGGAGAGTGGACGTCATAATTTGTGGTAGAGGGGGTACGCGTTCGCGCGGCCCCTGCCAAC
4	Ensembl_Plants	snRNA	20109539	20109659	.	-	.	ID=gene:ENSRNA049464998	Name=U5	biotype=snRNA	description=U5 spliceosomal RNA	sequence=AGCTGCGCAGTGGGCACATAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCTCGCTGCAAATAGCAGCATACTCAAATTTTTTGAGGGAATCTTCTGTATATAAGGAGAAT	4	Ensembl_Plants	LTR	20109555	20109695	446	-	.	ID=267208	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=CATAAAATAAGAGGCAACCAGCTTTTATAAGCAGGCAGCTGCGCAGTGGGCACATAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCTCGCTGCAAATAGCAGCATACTCAAATTTTTTGAGGGAATCTT
4	Ensembl_Plants	snRNA	17037203	17037367	.	-	.	ID=gene:ENSRNA049465086	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=ATACTTACCTGGACGGGGTCTATGGATGATCATGAAGGTCCATGGCCTAGGCTAGTGGCCTCCATTGCACTTGGGAGGAGCACTGGCTTACCATCTCCCTAAGTGGGAGAGTGGATGGACGTCATAATTTGTGGCAGAGGGGGTACGCGTTCGCGCGGCCCCTAC	4	Ensembl_Plants	LTR	17037206	17037410	798	-	.	ID=238531	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=AGAGAAGTGGGTATAAATTAAGAGGGAGGGGCAGCTTGCAAACATACTTACCTGGACGGGGTCTATGGATGATCATGAAGGTCCATGGCCTAGGCTAGTGGCCTCCATTGCACTTGGGAGGAGCACTGGCTTACCATCTCCCTAAGTGGGAGAGTGGATGGACGTCATAATTTGTGGCAGAGGGGGTACGCGTTCGCGCGGCCC
4	Ensembl_Plants	snRNA	17002948	17003109	.	-	.	ID=gene:ENSRNA049465106	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=ATACTTACCTGGATGGGGTCTATGGGTGATCAGGAAGGCTCATGGCCTAAGCTATTGACCTCCATTGCACAAAAGGAGGGACGATAGCTTACCATCTCCCCAAGTCGGAGAATGGACATCATAATTTGTGGTAGCGGGGGTACGCGTACGCGCGGCCCCTAC	4	Ensembl_Plants	LTR	17002935	17003120	874	-	.	ID=238532	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=AACACTGAAACATACTTACCTGGATGGGGTCTATGGGTGATCAGGAAGGCTCATGGCCTAAGCTATTGACCTCCATTGCACAAAAGGAGGGACGATAGCTTACCATCTCCCCAAGTCGGAGAATGGACATCATAATTTGTGGTAGCGGGGGTACGCGTACGCGCGGCCCCTACTAACTTAAGTTA
2	Ensembl_Plants	snRNA	14770945	14771141	.	+	.	ID=gene:ENSRNA049464601	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATGTGTCCACTTCGATATTAAATTTGTTTTTCGTGGGGGAGGGCCCACTGCAATGGCTTGCCACTGGGGCCCTCGCGCGTCGCCCTGGCGTTGCACTGCTGCCCGGGCCTGGCGCACCCCAA	2	Ensembl_Plants	LTR/Gypsy	14770951	14771136	353	+	.	ID=19519	repeat_name=Os1_13_1L	repeat_type=LTRs	sequence=TCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATGTGTCCACTTCGATATTAAATTTGTTTTTCGTGGGGGAGGGCCCACTGCAATGGCTTGCCACTGGGGCCCTCGCGCGTCGCCCTGGCGTTGCACTGCTGCCCGGGCCTGGCGCAC
2	Ensembl_Plants	snRNA	14770945	14771141	.	+	.	ID=gene:ENSRNA049464601	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATGTGTCCACTTCGATATTAAATTTGTTTTTCGTGGGGGAGGGCCCACTGCAATGGCTTGCCACTGGGGCCCTCGCGCGTCGCCCTGGCGTTGCACTGCTGCCCGGGCCTGGCGCACCCCAA	2	Ensembl_Plants	LTR	14770950	14771016	256	+	.	ID=267207	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=TTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGG
2	Ensembl_Plants	snRNA	13937442	13937602	.	-	.	ID=gene:ENSRNA049464616	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=ATACTTACCTGGACGGGGTCTATGGCCGATCAAGAAGGGTCATGGCCTAGGCCAGTGGCCCACATTGCACATGGTGGGTGCGCTGGCTTACCATCTCCCCAAGTGGGAGAGTGGACGTCATAATTTGTGGCAGAGGGGGTACGCGTTCGCGCGGCCCCTGC	2	Ensembl_Plants	LTR	13937436	13937611	607	-	.	ID=238535	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=CGTTGCAACATACTTACCTGGACGGGGTCTATGGCCGATCAAGAAGGGTCATGGCCTAGGCCAGTGGCCCACATTGCACATGGTGGGTGCGCTGGCTTACCATCTCCCCAAGTGGGAGAGTGGACGTCATAATTTGTGGCAGAGGGGGTACGCGTTCGCGCGGCCCCTGCCAATT
2	Ensembl_Plants	snRNA	16491411	16491607	.	+	.	ID=gene:ENSRNA049464583	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTAGGCCATGCGCCTACTTTGATATTAAATTTATTTTTTATGGGGGAGGACTCGCAACAGTAGCTTGCTACTGGGGTACTCGTGTGTCTACCTAGCGTTGCCCTACTGCTTGGGCCTGGCGCACCCCAA	2	Ensembl_Plants	LTR/Gypsy	16491417	16491474	394	+	.	ID=19520	repeat_name=Os1_13_1L	repeat_type=LTRs	sequence=TCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTG
2	Ensembl_Plants	snRNA	16491411	16491607	.	+	.	ID=gene:ENSRNA049464583	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTAGGCCATGCGCCTACTTTGATATTAAATTTATTTTTTATGGGGGAGGACTCGCAACAGTAGCTTGCTACTGGGGTACTCGTGTGTCTACCTAGCGTTGCCCTACTGCTTGGGCCTGGCGCACCCCAA	2	Ensembl_Plants	LTR/Gypsy	16491417	16491516	418	+	.	ID=19521	repeat_name=Os1_13_1L	repeat_type=LTRs	sequence=TCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTAGGCCATGCGCCTACTTTGATATTAAATTTATTTTT
2	Ensembl_Plants	snRNA	16491411	16491607	.	+	.	ID=gene:ENSRNA049464583	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTAGGCCATGCGCCTACTTTGATATTAAATTTATTTTTTATGGGGGAGGACTCGCAACAGTAGCTTGCTACTGGGGTACTCGTGTGTCTACCTAGCGTTGCCCTACTGCTTGGGCCTGGCGCACCCCAA	2	Ensembl_Plants	LTR/Gypsy	16491446	16491484	266	+	.	ID=19538	repeat_name=ATLANTYS-I_OS	repeat_type=LTRs	sequence=GTATCTGTTCTTATCAGTTTAATATCTGATATGTAGGC
2	Ensembl_Plants	snRNA	19811968	19812114	.	-	.	ID=gene:ENSRNA049464516	Name=U4	biotype=snRNA	description=U4 spliceosomal RNA	sequence=ATCTTTGCGCTTGGGGCAATGACGCAGCTAGTGAGGTAATACCGAGGCGCGTCAATTGCTGGTTGAAAACTATTTCCAATCCCCCTTTGTGGCCCTTTTGGGCCGCGGAGAATTTCTGGAAGGGTTCCCTCTAACCAGGGTAAAACC	2	Ensembl_Plants	MITE/MITE	19812030	19812116	336	-	.	ID=198204	repeat_name=Rufi_MITE1425	repeat_type=Unknown	sequence=TCATCTTTGCGCTTGGGGCAATGACGCAGCTAGTGAGGTAATACCGAGGCGCGTCAATTGCTGGTTGAAAACTATTTCCAATCCCC
6	Ensembl_Plants	snRNA	2866830	2866990	.	-	.	ID=gene:ENSRNA049464231	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=GCACTTACCTGGACGGGGTCGATGGGTGATCAAGGAGACCCATGGCCTAGATCAATGGCCCACATTGCACTTGGTTGGCGCGTTGGTCTACCATCTCCTCATGTAGGAGAGTGGACGTCGTAATTTGTGGTAGATGGGGTACGCGTTCGCGCGGCCCCTAC	6	Ensembl_Plants	LTR	2866806	2867003	773	-	.	ID=238529	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=GCAACCGTTGAAGGCACTTACCTGGACGGGGTCGATGGGTGATCAAGGAGACCCATGGCCTAGATCAATGGCCCACATTGCACTTGGTTGGCGCGTTGGTCTACCATCTCCTCATGTAGGAGAGTGGACGTCGTAATTTGTGGTAGATGGGGTACGCGTTCGCGCGGCCCCTACCAAGATTTTTAAATTTAAATTTA
6	Ensembl_Plants	snRNA	2323010	2323160	.	-	.	ID=gene:ENSRNA049464202	Name=U4	biotype=snRNA	description=U4 spliceosomal RNA	sequence=ATCTTTGCGCTTGGGGCAATGACGCAGCTAGTGAGGTAATACCGAGGCGCGTCAATTGCTGGTTGAAAACTATTTCCAAACCCCCTCTTTGGCCCACCCGGGCCACTGAGAATTTCTGGAAGGGCTCTTTCTCCTTGGAGAGAGTAAAGCC	6	Ensembl_Plants	MITE/MITE	2323077	2323161	273	-	.	ID=198207	repeat_name=Rufi_MITE1425	repeat_type=Unknown	sequence=CATCTTTGCGCTTGGGGCAATGACGCAGCTAGTGAGGTAATACCGAGGCGCGTCAATTGCTGGTTGAAAACTATTTCCAAACCC
6	Ensembl_Plants	snRNA	1640930	1641126	.	+	.	ID=gene:ENSRNA049464259	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTAGGCCATGTGTCTACTGTGATATTAAATTTATTTTTTGTGGGGGAGGGCCCACCACATTGGCTTGCCAATGGGGTCCTCATGTGTCGCCTAGGCGTGGCACTACTGCCTGGGCTTGGCACACCCCAA	6	Ensembl_Plants	LTR/Gypsy	1640936	1641035	423	+	.	ID=19527	repeat_name=Os1_13_1L	repeat_type=LTRs	sequence=TCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTAGGCCATGTGTCTACTGTGATATTAAATTTATTTTT
6	Ensembl_Plants	snRNA	1640930	1641126	.	+	.	ID=gene:ENSRNA049464259	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTAGGCCATGTGTCTACTGTGATATTAAATTTATTTTTTGTGGGGGAGGGCCCACCACATTGGCTTGCCAATGGGGTCCTCATGTGTCGCCTAGGCGTGGCACTACTGCCTGGGCTTGGCACACCCCAA	6	Ensembl_Plants	LTR/Gypsy	1640965	1641120	303	+	.	ID=19541	repeat_name=ATLANTYS-I_OS	repeat_type=LTRs	sequence=GTATCTGTTCTTATCAGTTTAATATCTGATACGTAGGCCATGTGTCTACTGTGATATTAAATTTATTTTTTGTGGGGGAGGGCCCACCACATTGGCTTGCCAATGGGGTCCTCATGTGTCGCCTAGGCGTGGCACTACTGCCTGGGCTTGGCACA
6	Ensembl_Plants	snRNA	1841626	1841776	.	-	.	ID=gene:ENSRNA049464216	Name=U4	biotype=snRNA	description=U4 spliceosomal RNA	sequence=ATCTTTGCGCTTGGGGCAATGACGCAGCTAGTGAGGTAATACCGAGGCGCGTCAATTGCTGGTTGAAAACTATTTCCAAACCCCCTCTTTGGCCCACCCGGGCCACTGAGAATTTCTGGAAGGGCTCTTTCTCTTCGGAGAGAGTAAAGCC	6	Ensembl_Plants	MITE/MITE	1841693	1841777	273	-	.	ID=198206	repeat_name=Rufi_MITE1425	repeat_type=Unknown	sequence=CATCTTTGCGCTTGGGGCAATGACGCAGCTAGTGAGGTAATACCGAGGCGCGTCAATTGCTGGTTGAAAACTATTTCCAAACCC
9	Ensembl_Plants	snRNA	4471015	4471117	.	+	.	ID=gene:ENSRNA049463757	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTCGGAGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATAGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTT	9	Ensembl_Plants	MITE/MITE	4471013	4471039	236	+	.	ID=198289	repeat_name=ORSgTEMT_687091	repeat_type=Unknown	sequence=CGTCTCTTCGGAGACATCCGATAAAA
9	Ensembl_Plants	snRNA	6567802	6567905	.	-	.	ID=gene:ENSRNA049463713	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=CTATAATATGCTAGCGGTACCAATAAAATTGGAACGATACAAACAATTAGTATGGCCCCTATGCAAGGATGACACGCATAAACCAAGAAATGGTCCAAATTTTT	9	Ensembl_Plants	LTR	6567800	6567880	403	-	.	ID=298270	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=AAATTGGAACGATACAAACAATTAGTATGGCCCCTATGCAAGGATGACACGCATAAACCAAGAAATGGTCCAAATTTTTC
11	Ensembl_Plants	snRNA	13752673	13752775	.	-	.	ID=gene:ENSRNA049463454	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTCGGAGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTT	11	Ensembl_Plants	LTR	13752660	13752841	720	-	.	ID=298224	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TAGTACCACCTCGTAAAGCTACCGAACTAAAGACCAGCTTATAAATCCACGCGCTGCGAACCAGTCGTCTCTTCGGAGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTTTTAAGAATTCTG
11	Ensembl_Plants	snRNA	11059634	11059736	.	-	.	ID=gene:ENSRNA049463439	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTCGGAGCCATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTT	11	Ensembl_Plants	LTR	11059632	11059802	655	-	.	ID=298335	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TAGTACCACCTTGGAAGCGAACAGAGGATGCGACCAGCTTATAAACACGCAAGCTGCTATCTAGTTGTCTCTTCGGAGCCATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTTT
10	Ensembl_Plants	snRNA	13068763	13068923	.	+	.	ID=gene:ENSRNA049462965	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=ATACTTACCTGGACGGGGTCGACGGGCGATCAGGAAGGCTCGTGGCCTAGGCCAATGGCCCACATTGCACTTGGTGGGCGCGTTGGCTTACCATCTCCCCGAGTGGGAGAGTGGACGTCATAATTTGTGATAGAGGGGGTACGCGTTCGCGCGGCCCCTGC	10	Ensembl_Plants	LTR	13068754	13068929	654	+	.	ID=238534	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=GTTGCAACATACTTACCTGGACGGGGTCGACGGGCGATCAGGAAGGCTCGTGGCCTAGGCCAATGGCCCACATTGCACTTGGTGGGCGCGTTGGCTTACCATCTCCCCGAGTGGGAGAGTGGACGTCATAATTTGTGATAGAGGGGGTACGCGTTCGCGCGGCCCCTGCCAAATT
3	Ensembl_Plants	snRNA	27928578	27928738	.	+	.	ID=gene:ENSRNA049462815	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=ATACTTACCTGGACGGGGTCAACGGGCGATCAGGAAGGCTCGTGGCCTAGGCCAGTGGCCCACATTGCACTTGGTGGGCGCGCTGGCTTACCATCTCCCCAAGTGGGAGAGTGGACGTCATAATTTGTGGTAGAGGGGGTACGCGTTCGCGCGGCCCCTGC	3	Ensembl_Plants	LTR	27928577	27928743	661	+	.	ID=238528	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=ATACTTACCTGGACGGGGTCAACGGGCGATCAGGAAGGCTCGTGGCCTAGGCCAGTGGCCCACATTGCACTTGGTGGGCGCGCTGGCTTACCATCTCCCCAAGTGGGAGAGTGGACGTCATAATTTGTGGTAGAGGGGGTACGCGTTCGCGCGGCCCCTGCCAATT
8	Ensembl_Plants	snRNA	16168133	16168251	.	+	.	ID=gene:ENSRNA049462494	Name=U5	biotype=snRNA	description=U5 spliceosomal RNA	sequence=AGCTGCGTGGTGAGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCGCGCCACAATTAGCAGCATACGCTAATTTTTGGAGGGAGCCTTCTCTTTGAGGAGGCC	8	Ensembl_Plants	LTR	16168120	16168183	398	-	.	ID=223667	repeat_name=LTR_Mt_chr_02_74	repeat_type=LTRs	sequence=TTCTTTAGTAAAAGGCGAAAGAATAGTTCGCTTTGTGCTCACCACGCAGCTGCGTGCTTACAA
8	Ensembl_Plants	snRNA	16168133	16168251	.	+	.	ID=gene:ENSRNA049462494	Name=U5	biotype=snRNA	description=U5 spliceosomal RNA	sequence=AGCTGCGTGGTGAGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCGCGCCACAATTAGCAGCATACGCTAATTTTTGGAGGGAGCCTTCTCTTTGAGGAGGCC	8	Ensembl_Plants	LTR	16168130	16168246	603	+	.	ID=267219	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=GCAGCTGCGTGGTGAGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCGCGCCACAATTAGCAGCATACGCTAATTTTTGGAGGGAGCCTTCTCTTTGAGG
8	Ensembl_Plants	snRNA	17893605	17893725	.	-	.	ID=gene:ENSRNA049462476	Name=U5	biotype=snRNA	description=U5 spliceosomal RNA	sequence=AGCTGCGCGGCGAGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCGCGCCGCAATTAGCAGCATACGCTAATTTTTGGAGGGTGGGTGCCCTGTTTAAGGGCCCC	8	Ensembl_Plants	LTR	17893629	17893728	450	-	.	ID=267221	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=CGCAGCTGCGCGGCGAGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCGCGCCGCAATTAGCAGCATACGCTAATTTTTGGAG
8	Ensembl_Plants	snRNA	728035	728223	.	+	.	ID=gene:ENSRNA049462017	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCCGTTCTTATCAGTTTAATATGCGAGCCATGCGCTCGCTTGATATTAAATTTATTTTTCGTGGGGGAGGATCCGTATTAGTGGCTTGCCACTAGGATTCTCGTGTGTCGCCTGAGCGTTGCACTAAAGCTCGGGCAAGGCACACCCCAA	8	Ensembl_Plants	LTR/Gypsy	728041	728094	361	+	.	ID=19533	repeat_name=Os1_13_1L	repeat_type=LTRs	sequence=TCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCCGTTCTTATCAGTTTAATA
8	Ensembl_Plants	snRNA	5001091	5001193	.	-	.	ID=gene:ENSRNA049461992	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTCGGAGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTT	8	Ensembl_Plants	MITE/MITE	5001169	5001195	248	-	.	ID=198288	repeat_name=ORSgTEMT_687091	repeat_type=Unknown	sequence=TTGTCTCTTCGGAGACATCCGATAAA
8	Ensembl_Plants	snRNA	5001091	5001193	.	-	.	ID=gene:ENSRNA049461992	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTCGGAGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTT	8	Ensembl_Plants	LTR	5001089	5001259	682	-	.	ID=298474	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TAGTACCACCTCGGAAAGCTAGTAAACAGAAGACTAATTTATAACCCCGCGCGCTGCGAACCGGTTGTCTCTTCGGAGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTTT
2	Ensembl_Plants	snRNA	4126984	4127180	.	-	.	ID=gene:ENSRNA049461296	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATGCGCCCACTACGATATTAAATTTATTTTTCGTGGGGGAGGGACAACCACAGTGGCTTGCCACTGGGGCCCTCGCGCGTCGCCCAGGCGTTGCACTGCTGCCCGGGCCTGGCGCACCCCAA	2	Ensembl_Plants	LTR/Gypsy	4127117	4127174	425	-	.	ID=19517	repeat_name=Os1_13_1L	repeat_type=LTRs	sequence=TTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCT
2	Ensembl_Plants	snRNA	4126984	4127180	.	-	.	ID=gene:ENSRNA049461296	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATGCGCCCACTACGATATTAAATTTATTTTTCGTGGGGGAGGGACAACCACAGTGGCTTGCCACTGGGGCCCTCGCGCGTCGCCCAGGCGTTGCACTGCTGCCCGGGCCTGGCGCACCCCAA	2	Ensembl_Plants	LTR/Gypsy	4126990	4127145	276	-	.	ID=19536	repeat_name=ATLANTYS-I_OS	repeat_type=LTRs	sequence=AGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATGCGCCCACTACGATATTAAATTTATTTTTCGTGGGGGAGGGACAACCACAGTGGCTTGCCACTGGGGCCCTCGCGCGTCGCCCAGGCGTTGCACTGCTGCCCGGGCCTGGCGC
2	Ensembl_Plants	snRNA	4126984	4127180	.	-	.	ID=gene:ENSRNA049461296	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATGCGCCCACTACGATATTAAATTTATTTTTCGTGGGGGAGGGACAACCACAGTGGCTTGCCACTGGGGCCCTCGCGCGTCGCCCAGGCGTTGCACTGCTGCCCGGGCCTGGCGCACCCCAA	2	Ensembl_Plants	LTR	4127121	4127260	259	+	.	ID=230648	repeat_name=LTR_AC190580.2_6272	repeat_type=LTRs	sequence=ATTAAACTGATAAGAACAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAAGGTATGAGTTGCTCCGTTGCTCTGTGCCGCCTCTTATACCTGCTCTCCCGCCTCCACCCGCTCAGAACCGGCGAGGCGGTACTAA
2	Ensembl_Plants	snRNA	4126984	4127180	.	-	.	ID=gene:ENSRNA049461296	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATGCGCCCACTACGATATTAAATTTATTTTTCGTGGGGGAGGGACAACCACAGTGGCTTGCCACTGGGGCCCTCGCGCGTCGCCCAGGCGTTGCACTGCTGCCCGGGCCTGGCGCACCCCAA	2	Ensembl_Plants	LTR	4127109	4127175	290	-	.	ID=267228	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=TTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTG
2	Ensembl_Plants	snRNA	4129509	4129705	.	-	.	ID=gene:ENSRNA049461285	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGAGCCATGCGCTCACTACGATATTAAATTTATTTTTTATGGGGGAGGGCCCACCACATTGGCTTGCCACTGGGGCCCTCGAGCGTCGCCCAGGCGTCGCACTATTGCTCGGGCCTGGCGCACCCCAA	2	Ensembl_Plants	LTR/Gypsy	4129600	4129699	424	-	.	ID=19518	repeat_name=Os1_13_1L	repeat_type=LTRs	sequence=TTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGAGCCATGCGCTCACTACGATATTAAATTTATTTT
2	Ensembl_Plants	snRNA	4129509	4129705	.	-	.	ID=gene:ENSRNA049461285	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGAGCCATGCGCTCACTACGATATTAAATTTATTTTTTATGGGGGAGGGCCCACCACATTGGCTTGCCACTGGGGCCCTCGAGCGTCGCCCAGGCGTCGCACTATTGCTCGGGCCTGGCGCACCCCAA	2	Ensembl_Plants	LTR/Gypsy	4129515	4129670	271	-	.	ID=19537	repeat_name=ATLANTYS-I_OS	repeat_type=LTRs	sequence=AGTATCTGTTCTTATCAGTTTAATATCTGATATGTGAGCCATGCGCTCACTACGATATTAAATTTATTTTTTATGGGGGAGGGCCCACCACATTGGCTTGCCACTGGGGCCCTCGAGCGTCGCCCAGGCGTCGCACTATTGCTCGGGCCTGGCGC
2	Ensembl_Plants	snRNA	4129509	4129705	.	-	.	ID=gene:ENSRNA049461285	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGAGCCATGCGCTCACTACGATATTAAATTTATTTTTTATGGGGGAGGGCCCACCACATTGGCTTGCCACTGGGGCCCTCGAGCGTCGCCCAGGCGTCGCACTATTGCTCGGGCCTGGCGCACCCCAA	2	Ensembl_Plants	LTR	4129646	4129792	274	+	.	ID=230647	repeat_name=LTR_AC190580.2_6272	repeat_type=LTRs	sequence=ATTAAACTGATAAGAACAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAAGGTATAAATTGCTCCGTCGGCCTGGGCCTCCTCTTATACCCGCTCTCCCGCCTCCGCTCGCTCTGAATTGGCGAGGCGGTACTAAACGGAGA
2	Ensembl_Plants	snRNA	4129509	4129705	.	-	.	ID=gene:ENSRNA049461285	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGAGCCATGCGCTCACTACGATATTAAATTTATTTTTTATGGGGGAGGGCCCACCACATTGGCTTGCCACTGGGGCCCTCGAGCGTCGCCCAGGCGTCGCACTATTGCTCGGGCCTGGCGCACCCCAA	2	Ensembl_Plants	LTR	4129636	4129700	288	-	.	ID=267227	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=TTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATG
JH592550.1	Ensembl_Plants	rRNA	378	496	.	+	.	ID=gene:ENSRNA049467489	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGATGCGATCATACCAGCACTCATGCACCGGATCCCATCAGAACTCCGAAGTTAAGCGGGCTTGGGCGAGACTAGTACTAGGATGGGTGACCTCTTGGGAAGTCCTCATGTTGCATCCC	JH592550.1	Ensembl_Plants	LTR/Gypsy	372	407	249	+	.	ID=33199	repeat_name=Os5_14_1L	repeat_type=LTRs	sequence=ATGCTGGATGCGATCATACCAGCACTCATGCACCG
JH592550.1	Ensembl_Plants	rRNA	378	496	.	+	.	ID=gene:ENSRNA049467489	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGATGCGATCATACCAGCACTCATGCACCGGATCCCATCAGAACTCCGAAGTTAAGCGGGCTTGGGCGAGACTAGTACTAGGATGGGTGACCTCTTGGGAAGTCCTCATGTTGCATCCC	JH592550.1	Ensembl_Plants	LTR	378	496	965	+	.	ID=33209	repeat_name=ebeuk_311G2-1	repeat_type=LTRs	sequence=GATGCGATCATACCAGCACTCATGCACCGGATCCCATCAGAACTCCGAAGTTAAGCGGGCTTGGGCGAGACTAGTACTAGGATGGGTGACCTCTTGGGAAGTCCTCATGTTGCATCCC
JH370107.2	Ensembl_Plants	rRNA	412	514	.	+	.	ID=gene:ENSRNA049467475	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGATGCGATCATACCAGCACTAAAGCACCGGATCGCATCAGAACTCTGAAGTTAAGCAGTACCAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCATCCC	JH370107.2	Ensembl_Plants	LTR/Gypsy	406	441	299	+	.	ID=33202	repeat_name=Os5_14_1L	repeat_type=LTRs	sequence=ATGCTGGATGCGATCATACCAGCACTAAAGCACCG
JH370107.2	Ensembl_Plants	rRNA	412	514	.	+	.	ID=gene:ENSRNA049467475	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGATGCGATCATACCAGCACTAAAGCACCGGATCGCATCAGAACTCTGAAGTTAAGCAGTACCAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCATCCC	JH370107.2	Ensembl_Plants	LTR	412	514	767	+	.	ID=33210	repeat_name=ebeuk_311G2-1	repeat_type=LTRs	sequence=GATGCGATCATACCAGCACTAAAGCACCGGATCGCATCAGAACTCTGAAGTTAAGCAGTACCAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCATCCC
JH370118.2	Ensembl_Plants	rRNA	468	585	.	-	.	ID=gene:ENSRNA049467365	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGATGCGATCATACCAGCACTAAAACACCGAATCCCATCGAAACTCCGATGTTAAGTGTGCTTGGGCGAGAGTAGTACTTGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCATCTT	JH370118.2	Ensembl_Plants	LTR/Gypsy	556	596	293	-	.	ID=33203	repeat_name=Os5_14_1L	repeat_type=LTRs	sequence=CAAGACATGCTGGATGCGATCATACCAGCACTAAAACACC
JH370118.2	Ensembl_Plants	rRNA	468	585	.	-	.	ID=gene:ENSRNA049467365	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGATGCGATCATACCAGCACTAAAACACCGAATCCCATCGAAACTCCGATGTTAAGTGTGCTTGGGCGAGAGTAGTACTTGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCATCTT	JH370118.2	Ensembl_Plants	LTR	470	585	923	-	.	ID=33212	repeat_name=ebeuk_311G2-1	repeat_type=LTRs	sequence=GGATGCGATCATACCAGCACTAAAACACCGAATCCCATCGAAACTCCGATGTTAAGTGTGCTTGGGCGAGAGTAGTACTTGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCAT
super0240	Ensembl_Plants	rRNA	10370	10487	.	+	.	ID=gene:ENSRNA049467240	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGATGCGATCATACCAGCAGTAAGCACCGGATCCCATCAGAACTCTGAAGTTATGCGTGCTTGGGCGATAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGATGCGTCCC	super0240	Ensembl_Plants	LTR	10370	10487	887	+	.	ID=33207	repeat_name=ebeuk_311G2-1	repeat_type=LTRs	sequence=GATGCGATCATACCAGCAGTAAGCACCGGATCCCATCAGAACTCTGAAGTTATGCGTGCTTGGGCGATAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGATGCGTCCC
super0161	Ensembl_Plants	rRNA	23247	23365	.	+	.	ID=gene:ENSRNA049467228	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGAAGCGTTCATACCAGCACTAAAGCACCGTATCCTATCAGAACACCGAAGTTCAGTGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCATCCC	super0161	Ensembl_Plants	LTR/Gypsy	23236	23276	231	+	.	ID=33196	repeat_name=Os5_14_1L	repeat_type=LTRs	sequence=GAGACATGCTGGAAGCGTTCATACCAGCACTAAAGCACCG
super0161	Ensembl_Plants	rRNA	23247	23365	.	+	.	ID=gene:ENSRNA049467228	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGAAGCGTTCATACCAGCACTAAAGCACCGTATCCTATCAGAACACCGAAGTTCAGTGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCATCCC	super0161	Ensembl_Plants	LTR	23247	23365	911	+	.	ID=33205	repeat_name=ebeuk_311G2-1	repeat_type=LTRs	sequence=GAAGCGTTCATACCAGCACTAAAGCACCGTATCCTATCAGAACACCGAAGTTCAGTGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCATCCC
super0161	Ensembl_Plants	rRNA	23247	23365	.	+	.	ID=gene:ENSRNA049467228	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGAAGCGTTCATACCAGCACTAAAGCACCGTATCCTATCAGAACACCGAAGTTCAGTGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCATCCC	super0161	Ensembl_Plants	LTR	23286	23352	275	+	.	ID=277354	repeat_name=LTR_Os_chr_11_2022	repeat_type=LTRs	sequence=GAACACCGAAGTTCAGTGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCT
super0520	Ensembl_Plants	rRNA	371	489	.	-	.	ID=gene:ENSRNA049467482	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGATGCGATCATACCAGCACCAAAGCAGCGGATCCCATCAGAACTCCGCAGTTAAGTGTGCTTGGGCGAGACTAGTACTGGGATGGGTGACCTCATGGGAAGTCCTCATGTTGCATCCC	super0520	Ensembl_Plants	LTR/Gypsy	460	495	251	-	.	ID=33198	repeat_name=Os5_14_1L	repeat_type=LTRs	sequence=CATGCTGGATGCGATCATACCAGCACCAAAGCAGC
super0520	Ensembl_Plants	rRNA	371	489	.	-	.	ID=gene:ENSRNA049467482	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGATGCGATCATACCAGCACCAAAGCAGCGGATCCCATCAGAACTCCGCAGTTAAGTGTGCTTGGGCGAGACTAGTACTGGGATGGGTGACCTCATGGGAAGTCCTCATGTTGCATCCC	super0520	Ensembl_Plants	LTR	371	489	929	-	.	ID=33208	repeat_name=ebeuk_311G2-1	repeat_type=LTRs	sequence=GGATGCGATCATACCAGCACCAAAGCAGCGGATCCCATCAGAACTCCGCAGTTAAGTGTGCTTGGGCGAGACTAGTACTGGGATGGGTGACCTCATGGGAAGTCCTCATGTTGCATCC
super0240	Ensembl_Plants	rRNA	9896	10014	.	+	.	ID=gene:ENSRNA049467233	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGATGCGATCATACCAGCACTAAAGCACCGGATCCCATCAGAACCCCGAAGTTAAGCCTGCTTGGGCGAGAGTAGTACTAGGATGGGTGTCCTCCTGGGAAGTCCTCGTGTTGCACTTT	super0240	Ensembl_Plants	LTR/Gypsy	9885	9925	281	+	.	ID=33197	repeat_name=Os5_14_1L	repeat_type=LTRs	sequence=GAGACATGCTGGATGCGATCATACCAGCACTAAAGCACCG
super0240	Ensembl_Plants	rRNA	9896	10014	.	+	.	ID=gene:ENSRNA049467233	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGATGCGATCATACCAGCACTAAAGCACCGGATCCCATCAGAACCCCGAAGTTAAGCCTGCTTGGGCGAGAGTAGTACTAGGATGGGTGTCCTCCTGGGAAGTCCTCGTGTTGCACTTT	super0240	Ensembl_Plants	LTR	9896	10010	947	+	.	ID=33206	repeat_name=ebeuk_311G2-1	repeat_type=LTRs	sequence=GATGCGATCATACCAGCACTAAAGCACCGGATCCCATCAGAACCCCGAAGTTAAGCCTGCTTGGGCGAGAGTAGTACTAGGATGGGTGTCCTCCTGGGAAGTCCTCGTGTTGCA
super0199	Ensembl_Plants	rRNA	7589	9469	.	-	.	ID=gene:ENSRNA049467163	Name=SSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic small subunit ribosomal RNA	sequence=TATCTGGTTGATTCTGCCAGTGACATATGCTTCTCTCAAAGATTAAGCCATGCATGTGCAAGTGCAAGCTATTTTTATGGTGAAACCGCGGAAGGCTCATTATATCAGTCATGGTTCATTGGATTGTACCCAGTTACTTGGATAACTGCGGAAATACTGGAGCTAATACATGCCAACGGAGTTCTGACCGGAGACGGGAGGAACGCTTTTATTAGATCAAAACCAATCGTTGGCTTCGGCCTTCGTGTTTTTGGTGACTCTGAATAACTTTGTGCAGATCGCATGGCCTCGCGCCAGCGACGCATCTTTCAAATGTCTGCCCTATCAACTTTCGATGGTAAGTTCTATGCTTACCATGGTTGTAACGGGTAACGGGGAATCAGGGTTCGATTCCGGAGAGGCAGCCTGAGACACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCACTCCCGGCACGGGGAGGTAGTGACGAAAGATAACAATACGGGACTCATCCGAGGCCTCGTAATTGGAATGGCAACACTTTAAATCCTTTATGGAGTATCTAACTGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCAGTTAGCGTATATCAAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTGCGTCTCGCACGGCTGGTTCACCGCCCGTCGGTGCTAACTGGTTCGTCGGGATGTCATGCCGGAGGCGCGTCAGCTACCCCTGCGGGGCGTGGGGGCGGTGCCCGTTGAAATCCTGCTCTGGTGCTCTTCACTGAGTGTCGAGGTGGGCCGGCACGTTTACTTTGAACAAATTAGAGTGCTCAAAGCAGGTCAAGTGATGGCCTTGAATATTTTTGCATGGAATAATGGAATAGGACTTCGGTCCCATTTTGTTGGTTTTAAGGACCTGAAGTAATGATAAATGGAGACAGGCGGGGGCATTCGTATTGCTACGTTAGAGGTGAAATTCTTGGATCGTAGCAAGACGGACTGAAGCGAAAGCATTTGCCAAGGATGTTCTCGTTGATCAAGAACGAAAGTTTGGGGCTCGAAGGCGATCAGATACCGCCCTAGTCCAAACCATAAACTATATAGACTGGTCCTCTGAGGGATGTCCATTGATGCATCCTCAGGTAGCCTCCGAGAAATCAAAGTTTTTGTATTCCGGGGGAAGTATGGTTGCAAAGCTGAAACTTAAAGAAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGAAATCTTACCAGGCCCAGACACTGGAAGGATTGACAGATTGAAAGCTCTTTCTTGATTCAGTGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGTGATTTGTCTGCTTAATTGCGATAACGAACGAGACTCTAACCTGCTAAATAGACGTACCCGGCTTCCAAGGCAGCCGGCGGTACTAAATCTTCTTAGAGGGACAGGCGGCTCTTAGCCGCACGAGATTGAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACAATGGAGGTGTCAGCGTGTCCTCCCTGGCCGAAAGGTCTGGGTAACCCGCTGAAACGCCTTCTTACTAGGGATTGTGGCTTGAAATTGTACCACATGAACGAGGAATTCCCAGTAAAGGCGTGTCATCAGCACGCCTTGATTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTACTACCGATTGAATGTTTTAGTGAGGTCTTTGGACCGGCGCGCGGAGTTCCTTCGGGAACACCGATGCCGCTGGGAAGATGCCCAAACTTGAATATTTAGAGGAAGTAAAAGTCGTAACAAGGTTGCTGTAGGTGAACCTGCAGCAGGATCATTA	super0199	Ensembl_Plants	LTR	8775	8933	722	-	.	ID=228013	repeat_name=LTR_Al_scaffold_0003_561	repeat_type=LTRs	sequence=TAAATCCTTTATGGAGTATCTAACTGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCAGTTAGCGTATATCAAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTGCGTCTCGCACGGCTGGTTCACCGCCCGTCGGTGCTAACTGG
super0199	Ensembl_Plants	rRNA	7589	9469	.	-	.	ID=gene:ENSRNA049467163	Name=SSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic small subunit ribosomal RNA	sequence=TATCTGGTTGATTCTGCCAGTGACATATGCTTCTCTCAAAGATTAAGCCATGCATGTGCAAGTGCAAGCTATTTTTATGGTGAAACCGCGGAAGGCTCATTATATCAGTCATGGTTCATTGGATTGTACCCAGTTACTTGGATAACTGCGGAAATACTGGAGCTAATACATGCCAACGGAGTTCTGACCGGAGACGGGAGGAACGCTTTTATTAGATCAAAACCAATCGTTGGCTTCGGCCTTCGTGTTTTTGGTGACTCTGAATAACTTTGTGCAGATCGCATGGCCTCGCGCCAGCGACGCATCTTTCAAATGTCTGCCCTATCAACTTTCGATGGTAAGTTCTATGCTTACCATGGTTGTAACGGGTAACGGGGAATCAGGGTTCGATTCCGGAGAGGCAGCCTGAGACACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCACTCCCGGCACGGGGAGGTAGTGACGAAAGATAACAATACGGGACTCATCCGAGGCCTCGTAATTGGAATGGCAACACTTTAAATCCTTTATGGAGTATCTAACTGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCAGTTAGCGTATATCAAAGTTGTTGCGGTTAAAAAGCTCGTAGTTGGATCTGCGTCTCGCACGGCTGGTTCACCGCCCGTCGGTGCTAACTGGTTCGTCGGGATGTCATGCCGGAGGCGCGTCAGCTACCCCTGCGGGGCGTGGGGGCGGTGCCCGTTGAAATCCTGCTCTGGTGCTCTTCACTGAGTGTCGAGGTGGGCCGGCACGTTTACTTTGAACAAATTAGAGTGCTCAAAGCAGGTCAAGTGATGGCCTTGAATATTTTTGCATGGAATAATGGAATAGGACTTCGGTCCCATTTTGTTGGTTTTAAGGACCTGAAGTAATGATAAATGGAGACAGGCGGGGGCATTCGTATTGCTACGTTAGAGGTGAAATTCTTGGATCGTAGCAAGACGGACTGAAGCGAAAGCATTTGCCAAGGATGTTCTCGTTGATCAAGAACGAAAGTTTGGGGCTCGAAGGCGATCAGATACCGCCCTAGTCCAAACCATAAACTATATAGACTGGTCCTCTGAGGGATGTCCATTGATGCATCCTCAGGTAGCCTCCGAGAAATCAAAGTTTTTGTATTCCGGGGGAAGTATGGTTGCAAAGCTGAAACTTAAAGAAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGAAATCTTACCAGGCCCAGACACTGGAAGGATTGACAGATTGAAAGCTCTTTCTTGATTCAGTGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGTGATTTGTCTGCTTAATTGCGATAACGAACGAGACTCTAACCTGCTAAATAGACGTACCCGGCTTCCAAGGCAGCCGGCGGTACTAAATCTTCTTAGAGGGACAGGCGGCTCTTAGCCGCACGAGATTGAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACAATGGAGGTGTCAGCGTGTCCTCCCTGGCCGAAAGGTCTGGGTAACCCGCTGAAACGCCTTCTTACTAGGGATTGTGGCTTGAAATTGTACCACATGAACGAGGAATTCCCAGTAAAGGCGTGTCATCAGCACGCCTTGATTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTACTACCGATTGAATGTTTTAGTGAGGTCTTTGGACCGGCGCGCGGAGTTCCTTCGGGAACACCGATGCCGCTGGGAAGATGCCCAAACTTGAATATTTAGAGGAAGTAAAAGTCGTAACAAGGTTGCTGTAGGTGAACCTGCAGCAGGATCATTA	super0199	Ensembl_Plants	LTR	7586	8669	4935	-	.	ID=228014	repeat_name=LTR_Al_scaffold_0003_561	repeat_type=LTRs	sequence=CCGGCACGTTTACTTTGAACAAATTAGAGTGCTCAAAGCAGGTCAAGTGATGGCCTTGAATATTTTTGCATGGAATAATGGAATAGGACTTCGGTCCCATTTTGTTGGTTTTAAGGACCTGAAGTAATGATAAATGGAGACAGGCGGGGGCATTCGTATTGCTACGTTAGAGGTGAAATTCTTGGATCGTAGCAAGACGGACTGAAGCGAAAGCATTTGCCAAGGATGTTCTCGTTGATCAAGAACGAAAGTTTGGGGCTCGAAGGCGATCAGATACCGCCCTAGTCCAAACCATAAACTATATAGACTGGTCCTCTGAGGGATGTCCATTGATGCATCCTCAGGTAGCCTCCGAGAAATCAAAGTTTTTGTATTCCGGGGGAAGTATGGTTGCAAAGCTGAAACTTAAAGAAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGAAATCTTACCAGGCCCAGACACTGGAAGGATTGACAGATTGAAAGCTCTTTCTTGATTCAGTGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGTGATTTGTCTGCTTAATTGCGATAACGAACGAGACTCTAACCTGCTAAATAGACGTACCCGGCTTCCAAGGCAGCCGGCGGTACTAAATCTTCTTAGAGGGACAGGCGGCTCTTAGCCGCACGAGATTGAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACAATGGAGGTGTCAGCGTGTCCTCCCTGGCCGAAAGGTCTGGGTAACCCGCTGAAACGCCTTCTTACTAGGGATTGTGGCTTGAAATTGTACCACATGAACGAGGAATTCCCAGTAAAGGCGTGTCATCAGCACGCCTTGATTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTACTACCGATTGAATGTTTTAGTGAGGTCTTTGGACCGGCGCGCGGAGTTCCTTCGGGAACACCGATGCCGCTGGGAAGATGCCCAAACTTGAATATTTAGAGGAAGTAAAAGTCGTAACAAGGTTGCTGTAGGTGAACCTGCAGCAGGATCATTACC
5	Ensembl_Plants	rRNA	8706584	8707015	.	+	.	ID=gene:ENSRNA049460662	Name=LSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic large subunit ribosomal RNA	sequence=TCGGGAGAGATGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATAACAGGTTGATCTTCCCCAAGAGTCCACATCGACGGGAAGTTTTGGCACCTCGATGTCGCCTCTTCGCCACCTGGAGCTATAGGTGGTTCCAAGGGTTGGGCTGTTCGCCCATTAATGCGGTATGTGAACTGGGTTCAGAACATCGTGAGACAATTCGGTCCATATCCGGTGTGGGCGTTAGAGCATTGAGAGGACCTTTCCCTAGTACGAGAGGACCGGGAAGGACGCACCTCTGGTGTACCAGTTATCGTGCCTACGGTAAACGCTGGGTAGCCAAGTGCGGAGAGGATAACTGCTGAAAGCATATAAGTAGTAAGCCCACCCCAAGATGAGTGCTCTCTCCTC	5	Ensembl_Plants	DNA/hAT	8706584	8707112	4731	-	.	ID=152575	repeat_name=JOUZHEN	repeat_type=Type II Transposons	sequence=ACCTTATCCTATTTCCATGCTTCTGTCGCTCCATCCCCGTATGGGTGGAGAACCCGTCGCTGTCTCGGCTGTGCTACCGGAGGCTCTAGGGAAGTCGGAGGAGAGAGCACTCATCTTGGGGTGGGCTTACTACTTATATGCTTTCAGCAGTTATCCTCTCCGCACTTGGCTACCCAGCGTTTACCGTAGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAATTGTCTCACGATGTTCTGAACCCAGTTCACATACCGCATTAATGGGCGAACAGCCCAACCCTTGGAACCACCTATAGCTCCAGGTGGCGAAGAGGCGACATCGAGGTGCCAAAACTTCCCGTCGATGTGGACTCTTGGGGAAGATCAACCTGTTATCCCTAGAGTAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGACTTTCATCTCTCCCG
5	Ensembl_Plants	tRNA	17344028	17344100	.	-	.	ID=gene:ENSRNA049445674	Name=tRNA-Val	biotype=tRNA	description=tRNA-Val for anticodon UAC	sequence=GTTGCTGTGGTGTAGTGGTTATCACGTCAGTCTTACACACTGAAGGTCTCCAGTTCGATCCTGGGCAGCAACA	5	Ensembl_Plants	MITE/MITE	17344028	17344100	371	-	.	ID=185431	repeat_name=ORSgTEMT_650716	repeat_type=Unknown	sequence=GTTGCTGTGGTGTAGTGGTTATCACGTCAGTCTTACACACTGAAGGTCTCCAGTTCGATCCTGGGCAGCAAC
5	Ensembl_Plants	tRNA	19781832	19781904	.	-	.	ID=gene:ENSRNA049445730	Name=tRNA-Val	biotype=tRNA	description=tRNA-Val for anticodon UAC	sequence=GTTGCTGTGGTGTAGTGGTTATCACGTCAGTCTTACACACTGAAGGTCTCCAGTTCGATCCTGGGCAGCAACA	5	Ensembl_Plants	MITE/MITE	19781832	19781904	375	-	.	ID=185432	repeat_name=ORSgTEMT_650716	repeat_type=Unknown	sequence=GTTGCTGTGGTGTAGTGGTTATCACGTCAGTCTTACACACTGAAGGTCTCCAGTTCGATCCTGGGCAGCAAC
JH593233.1	Ensembl_Plants	tRNA	63	135	.	-	.	ID=gene:ENSRNA049448015	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon UUU	sequence=GCCTGGCTAGCTCAGCCGGTAGAGCATTGGACTTTTAATCCAAGGGTCGTGGGTTCGAGTCCCCCGTCAGGCG	JH593233.1	Ensembl_Plants	DNA/unclassified	61	135	469	-	.	ID=170980	repeat_name=ORSgTETN001_675336	repeat_type=Type II Transposons	sequence=GCCTGGCTAGCTCAGCCGGTAGAGCATTGGACTTTTAATCCAAGGGTCGTGGGTTCGAGTCCCCCGTCAGGCGT
JH593233.1	Ensembl_Plants	tRNA	63	135	.	-	.	ID=gene:ENSRNA049448015	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon UUU	sequence=GCCTGGCTAGCTCAGCCGGTAGAGCATTGGACTTTTAATCCAAGGGTCGTGGGTTCGAGTCCCCCGTCAGGCG	JH593233.1	Ensembl_Plants	LTR	10	143	279	+	.	ID=235085	repeat_name=Zm_AC145262.7_1L	repeat_type=LTRs	sequence=GACAGGAAGGAAGAAAGTGACGCGGAAAGTGACAAAAAGACGAAAAAACAGACGCCTGACGGGGGACTCGAACCCACGACCCTTGGATTAAAAGTCCAATGCTCTACCGGCTGAGCTAGCCAGGCTCTGCGTA
JH593233.1	Ensembl_Plants	tRNA	63	135	.	-	.	ID=gene:ENSRNA049448015	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon UUU	sequence=GCCTGGCTAGCTCAGCCGGTAGAGCATTGGACTTTTAATCCAAGGGTCGTGGGTTCGAGTCCCCCGTCAGGCG	JH593233.1	Ensembl_Plants	LTR	61	145	352	-	.	ID=235097	repeat_name=LTR_AC183412.5_672	repeat_type=LTRs	sequence=CTTACGCAGAGCCTGGCTAGCTCAGCCGGTAGAGCATTGGACTTTTAATCCAAGGGTCGTGGGTTCGAGTCCCCCGTCAGGCGT
9	Ensembl_Plants	tRNA	5370320	5370392	.	-	.	ID=gene:ENSRNA049447614	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon CUU	sequence=GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCG	9	Ensembl_Plants	MITE/MITE	5370296	5370399	519	-	.	ID=171162	repeat_name=ORSgTEMT_622655	repeat_type=Unknown	sequence=ACAGATGGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCGCCATTTTTTTGTCGTTTTGTTTT
9	Ensembl_Plants	tRNA	5370320	5370392	.	-	.	ID=gene:ENSRNA049447614	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon CUU	sequence=GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCG	9	Ensembl_Plants	LTR	5370296	5370408	591	+	.	ID=224213	repeat_name=LTR_AC191331.2_7777	repeat_type=LTRs	sequence=AAAACAAAACGACAAAAAAATGGCGCCCACCGTGGGGCTCGAACCCACGACCACAAGGTTAAGAGCCTTGCGCTCTACCGACTGAGCTAGACGGGCCATCTGTTTCAAATAG
9	Ensembl_Plants	tRNA	5370320	5370392	.	-	.	ID=gene:ENSRNA049447614	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon CUU	sequence=GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCG	9	Ensembl_Plants	LTR	5370282	5370400	599	-	.	ID=235092	repeat_name=LTR_AC183412.5_672	repeat_type=LTRs	sequence=AACAGATGGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCGCCATTTTTTTGTCGTTTTGTTTTTTTAAATCCAATTT
9	Ensembl_Plants	tRNA	7436933	7437006	.	-	.	ID=gene:ENSRNA049447667	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA	9	Ensembl_Plants	DNA/MuDR	7436933	7437006	436	-	.	ID=172850	repeat_name=MUDRN2_OS	repeat_type=Type II Transposons	sequence=GGCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCC
9	Ensembl_Plants	tRNA	7436933	7437006	.	-	.	ID=gene:ENSRNA049447667	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA	9	Ensembl_Plants	LTR	7436927	7437008	562	+	.	ID=236407	repeat_name=LTR_Al_scaffold_0002_362	repeat_type=LTRs	sequence=AAAATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATAGGCCTT
9	Ensembl_Plants	tRNA	12781772	12781844	.	-	.	ID=gene:ENSRNA049447759	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	9	Ensembl_Plants	MITE/MITE	12781758	12781873	648	-	.	ID=166432	repeat_name=ORSgTEMT_761479	repeat_type=Unknown	sequence=ATGTTGGTTGTAGCTTGAACATTCAAGTTGGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCATTTTCAATTTTTT
9	Ensembl_Plants	tRNA	12781772	12781844	.	-	.	ID=gene:ENSRNA049447759	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	9	Ensembl_Plants	LTR	12781687	12781845	731	+	.	ID=261594	repeat_name=LTR_Gm_18_6105	repeat_type=LTRs	sequence=AAAACAAAAAAGAGGAAGCAAGCACATCAAACAAACAAATAGGTGAAGGATTAGAAAAGATAATTCTGACAAAAAAATTGAAAATGGAGATGCGGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCA
9	Ensembl_Plants	tRNA	13658813	13658885	.	-	.	ID=gene:ENSRNA049447771	Name=tRNA-Arg	biotype=tRNA	description=tRNA-Arg for anticodon CCG	sequence=GACCGCGTGGCCTAATGGATAAGGCGCTCGCCTCCGGAGCGGGAGATTGTGGGTTCGAGTCCCATCGTGGTCG	9	Ensembl_Plants	LTR/Gypsy	13658813	13658885	407	-	.	ID=211146	repeat_name=ORSgTERT002_674503	repeat_type=LTRs	sequence=GACCGCGTGGCCTAATGGATAAGGCGCTCGCCTCCGGAGCGGGAGATTGTGGGTTCGAGTCCCATCGTGGTC
9	Ensembl_Plants	tRNA	10333490	10333563	.	+	.	ID=gene:ENSRNA049447872	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA	9	Ensembl_Plants	DNA/MuDR	10333490	10333563	491	+	.	ID=172851	repeat_name=MUDRN2_OS	repeat_type=Type II Transposons	sequence=GCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA
9	Ensembl_Plants	tRNA	10333490	10333563	.	+	.	ID=gene:ENSRNA049447872	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA	9	Ensembl_Plants	LTR	10333475	10333579	609	-	.	ID=236402	repeat_name=LTR_Al_scaffold_0002_362	repeat_type=LTRs	sequence=AAAAAAGTTCATATTTTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCCAGTTGATGATTTCG
12	Ensembl_Plants	tRNA	1760024	1760096	.	-	.	ID=gene:ENSRNA049443869	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	12	Ensembl_Plants	MITE/MITE	1760015	1760096	609	-	.	ID=166442	repeat_name=ORSgTEMT_761479	repeat_type=Unknown	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCAAAGTTTTT
12	Ensembl_Plants	tRNA	1760024	1760096	.	-	.	ID=gene:ENSRNA049443869	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	12	Ensembl_Plants	LTR	1760010	1760100	667	+	.	ID=241190	repeat_name=LTR_Mt_chr_02_162	repeat_type=LTRs	sequence=ACAGAAAAAACTTTGGAGATGCGGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCGTAT
12	Ensembl_Plants	tRNA	14714989	14715059	.	+	.	ID=gene:ENSRNA049444167	Name=tRNA-Gly	biotype=tRNA	description=tRNA-Gly for anticodon GCC	sequence=GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGTGCA	12	Ensembl_Plants	MITE/MITE	14714989	14715065	348	+	.	ID=103140	repeat_name=ORSgTEMT_717204	repeat_type=Unknown	sequence=CACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGTGCATTTTTT
12	Ensembl_Plants	tRNA	210801	210874	.	+	.	ID=gene:ENSRNA049444405	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA	12	Ensembl_Plants	DNA/MuDR	210801	210874	436	+	.	ID=172853	repeat_name=MUDRN2_OS	repeat_type=Type II Transposons	sequence=GCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA
JH370054.2	Ensembl_Plants	tRNA	177	258	.	-	.	ID=gene:ENSRNA049437844	Name=tRNA-Ser	biotype=tRNA	description=tRNA-Ser for anticodon GCU	sequence=GACGAGGTGGCCGAGTGGTTAAGGCGTTGGACTGCTAATCCAATGGGCTCTGCCCGCGTGAGTTCGAATCTCATCCTCGTCG	JH370054.2	Ensembl_Plants	MITE/MITE	175	258	579	-	.	ID=144656	repeat_name=ORSgTEMT_694693	repeat_type=Unknown	sequence=GACGAGGTGGCCGAGTGGTTAAGGCGTTGGACTGCTAATCCAATGGGCTCTGCCCGCGTGAGTTCGAATCTCATCCTCGTCGT
super0638	Ensembl_Plants	tRNA	101	182	.	-	.	ID=gene:ENSRNA049438006	Name=tRNA-Ser	biotype=tRNA	description=tRNA-Ser for anticodon AGA	sequence=GCAGTCGTGGCCGAGTGGTTAAGGCGACTGACTAGAAATCAGTTTCCCTCTGGGAGCGTAGGTTCGAGTCCTACCGACTGCG	super0638	Ensembl_Plants	DNATE/EnSPm	100	182	462	-	.	ID=178914	repeat_name=O_DNATE5403	repeat_type=Type II Transposons	sequence=GCAGTCGTGGCCGAGTGGTTAAGGCGACTGACTAGAAATCAGTTTCCCTCTGGGAGCGTAGGTTCGAGTCCTACCGACTGCG
JH369869.2	Ensembl_Plants	tRNA	25258	25330	.	-	.	ID=gene:ENSRNA049438199	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon CUU	sequence=GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCG	JH369869.2	Ensembl_Plants	MITE/MITE	25208	25335	577	-	.	ID=171173	repeat_name=ORSgTEMT_622655	repeat_type=Unknown	sequence=AAAAAGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCGTTCGTAGTTTTTTGCTTTTCTTTTTTTTTTGTCTCTAAACATTTCCGTT
4	Ensembl_Plants	tRNA	13178621	13178694	.	-	.	ID=gene:ENSRNA049446504	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA	4	Ensembl_Plants	DNA/MuDR	13178621	13178694	436	-	.	ID=172844	repeat_name=MUDRN2_OS	repeat_type=Type II Transposons	sequence=GGCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCC
4	Ensembl_Plants	tRNA	13178621	13178694	.	-	.	ID=gene:ENSRNA049446504	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA	4	Ensembl_Plants	LTR	13178602	13178694	568	+	.	ID=236405	repeat_name=LTR_Al_scaffold_0002_362	repeat_type=LTRs	sequence=AAAGAATTAAAAAAAATATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATAGGCC
4	Ensembl_Plants	tRNA	17798311	17798383	.	-	.	ID=gene:ENSRNA049446575	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon CGC	sequence=GGGGGTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAGGCACGGGGTTCGATTCCCCGCACCTCCA	4	Ensembl_Plants	MITE/MITE	17798311	17798383	480	-	.	ID=166415	repeat_name=ORSgTEMT_761479	repeat_type=Unknown	sequence=GGGGGTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAGGCACGGGGTTCGATTCCCCGCACCTCC
4	Ensembl_Plants	tRNA	17798311	17798383	.	-	.	ID=gene:ENSRNA049446575	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon CGC	sequence=GGGGGTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAGGCACGGGGTTCGATTCCCCGCACCTCCA	4	Ensembl_Plants	LTR	17798283	17798383	492	+	.	ID=241180	repeat_name=LTR_Mt_chr_02_162	repeat_type=LTRs	sequence=TGGCGAGCAAAAAGGGATTTTTATTGGTGGAGGTGCGGGGAATCGAACCCCGTGCCTCTCGCATGCGAAGCGAGCGCTCTACCATATGAGCTACACCCCC
4	Ensembl_Plants	tRNA	13786405	13786477	.	+	.	ID=gene:ENSRNA049446802	Name=tRNA-Arg	biotype=tRNA	description=tRNA-Arg for anticodon CCG	sequence=GGTCGCGTGGCCTAATGGATAAGGCGCTCGCCTCCGGAGCGGGAGATTGTGGGTTCGAGTCCCACCGTGATCG	4	Ensembl_Plants	LTR/Gypsy	13786405	13786477	391	+	.	ID=211141	repeat_name=ORSgTERT002_674503	repeat_type=LTRs	sequence=GTCGCGTGGCCTAATGGATAAGGCGCTCGCCTCCGGAGCGGGAGATTGTGGGTTCGAGTCCCACCGTGATCG
4	Ensembl_Plants	tRNA	8550771	8550851	.	+	.	ID=gene:ENSRNA049446939	Name=tRNA-Leu	biotype=tRNA	description=tRNA-Leu for anticodon AAG	sequence=GTTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACA	4	Ensembl_Plants	DNA/unclassified	8550771	8550851	396	+	.	ID=150309	repeat_name=ORSgTETNOOT_623591	repeat_type=Type II Transposons	sequence=TTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACA
11	Ensembl_Plants	tRNA	864574	864646	.	-	.	ID=gene:ENSRNA049445047	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon UGC	sequence=GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGCACGGGGTTCGATCCCCCGCATCTCCA	11	Ensembl_Plants	MITE/MITE	864574	864647	509	-	.	ID=166436	repeat_name=ORSgTEMT_761479	repeat_type=Unknown	sequence=AGGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGCACGGGGTTCGATCCCCCGCATCTCC
11	Ensembl_Plants	tRNA	864574	864646	.	-	.	ID=gene:ENSRNA049445047	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon UGC	sequence=GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGCACGGGGTTCGATCCCCCGCATCTCCA	11	Ensembl_Plants	LTR	864541	864646	558	+	.	ID=241191	repeat_name=LTR_Mt_chr_02_162	repeat_type=LTRs	sequence=AAAAATAAATTAATTTAAAAAGAGTAAAACAGTGGAGATGCGGGGGATCGAACCCCGTGCCTCTCGCATGCAAAGCGAGCGCTCTACCATTTGAGCTACATCCCC
11	Ensembl_Plants	tRNA	13701746	13701818	.	+	.	ID=gene:ENSRNA049445232	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	11	Ensembl_Plants	MITE/MITE	13701746	13701819	584	+	.	ID=166440	repeat_name=ORSgTEMT_761479	repeat_type=Unknown	sequence=GGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCAA
11	Ensembl_Plants	tRNA	13701746	13701818	.	+	.	ID=gene:ENSRNA049445232	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	11	Ensembl_Plants	LTR	13701744	13701836	667	-	.	ID=261601	repeat_name=LTR_Gm_18_6105	repeat_type=LTRs	sequence=CTGATTAACTAAAAAACTTGGAGATGCGGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCA
10	Ensembl_Plants	tRNA	10855462	10855534	.	-	.	ID=gene:ENSRNA049443467	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	10	Ensembl_Plants	MITE/MITE	10855447	10855534	678	-	.	ID=166433	repeat_name=ORSgTEMT_761479	repeat_type=Unknown	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCAAATTTTATGTTTTT
10	Ensembl_Plants	tRNA	10855462	10855534	.	-	.	ID=gene:ENSRNA049443467	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	10	Ensembl_Plants	LTR	10855439	10855540	712	+	.	ID=261608	repeat_name=LTR_Gm_18_6105	repeat_type=LTRs	sequence=TTTAAATAAAAAACATAAAATTTGGAGATGCGGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCATTTTG
10	Ensembl_Plants	tRNA	13355952	13356022	.	+	.	ID=gene:ENSRNA049443588	Name=tRNA-Gly	biotype=tRNA	description=tRNA-Gly for anticodon GCC	sequence=GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGTGCA	10	Ensembl_Plants	MITE/MITE	13355949	13356022	351	-	.	ID=160099	repeat_name=BR_MITE1500	repeat_type=Unknown	sequence=TGCACCAGCCGGGAATCGAACCCGGGTCTGTACCGTGGCAGGGTACTATTCTACCACTAGACCACTGGTGCTG
6	Ensembl_Plants	tRNA	1393456	1393528	.	-	.	ID=gene:ENSRNA049445981	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	6	Ensembl_Plants	MITE/MITE	1393438	1393529	687	-	.	ID=166421	repeat_name=ORSgTEMT_761479	repeat_type=Unknown	sequence=AGGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCAAATCTATTTTATTATTC
6	Ensembl_Plants	tRNA	1393456	1393528	.	-	.	ID=gene:ENSRNA049445981	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	6	Ensembl_Plants	LTR	1393421	1393528	711	+	.	ID=241188	repeat_name=LTR_Mt_chr_02_162	repeat_type=LTRs	sequence=AACAAAAAGATTTGTTAGAATAATAAAATAGATTTGGAGATGCGGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCC
6	Ensembl_Plants	tRNA	8573806	8573887	.	-	.	ID=gene:ENSRNA049446070	Name=tRNA-Ser	biotype=tRNA	description=tRNA-Ser for anticodon CGA	sequence=GTCGATATGTCCGAGTGGTTAAGGAGGTAGACTCGAAATCTACTGGGCTCTGCCCGCGCAGGTTCGAATCCTGCTGTCGACG	6	Ensembl_Plants	DNATE/EnSPm	8573799	8573890	505	-	.	ID=178906	repeat_name=O_DNATE5403	repeat_type=Type II Transposons	sequence=GTGGTCGATATGTCCGAGTGGTTAAGGAGGTAGACTCGAAATCTACTGGGCTCTGCCCGCGCAGGTTCGAATCCTGCTGTCGACGCATTTT
6	Ensembl_Plants	tRNA	15513596	15513666	.	-	.	ID=gene:ENSRNA049446163	Name=tRNA-Gly	biotype=tRNA	description=tRNA-Gly for anticodon GCC	sequence=GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGTGCA	6	Ensembl_Plants	MITE/MITE	15513596	15513666	347	+	.	ID=160095	repeat_name=BR_MITE1500	repeat_type=Unknown	sequence=GCACCAGCCGGGAATCGAACCCGGGTCTGTACCGTGGCAGGGTACTATTCTACCACTAGACCACTGGTGC
6	Ensembl_Plants	tRNA	15513596	15513666	.	-	.	ID=gene:ENSRNA049446163	Name=tRNA-Gly	biotype=tRNA	description=tRNA-Gly for anticodon GCC	sequence=GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGTGCA	6	Ensembl_Plants	MITE/MITE	15513596	15513666	354	+	.	ID=160096	repeat_name=BR_MITE1500	repeat_type=Unknown	sequence=GCACCAGCCGGGAATCGAACCCGGGTCTGTACCGTGGCAGGGTACTATTCTACCACTAGACCACTGGTGC
6	Ensembl_Plants	tRNA	17220842	17220922	.	+	.	ID=gene:ENSRNA049446287	Name=tRNA-Leu	biotype=tRNA	description=tRNA-Leu for anticodon CAG	sequence=GTCAAGATGGCCGAGTTGGTCTAAGGCGCCAGTTTCAGGTACTGGTCCGAAAGGGCATGGGTTCGAATCCCATTCTTGACA	6	Ensembl_Plants	DNA/unclassified	17220842	17220922	449	+	.	ID=150315	repeat_name=ORSgTETNOOT_623591	repeat_type=Type II Transposons	sequence=TCAAGATGGCCGAGTTGGTCTAAGGCGCCAGTTTCAGGTACTGGTCCGAAAGGGCATGGGTTCGAATCCCATTCTTGACA
8	Ensembl_Plants	tRNA	11077758	11077828	.	-	.	ID=gene:ENSRNA049444593	Name=tRNA-Gly	biotype=tRNA	description=tRNA-Gly for anticodon GCC	sequence=GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGTGCA	8	Ensembl_Plants	MITE/MITE	11077758	11077829	334	+	.	ID=160098	repeat_name=BR_MITE1500	repeat_type=Unknown	sequence=GCACCAGCCGGGAATCGAACCCGGGTCTGTACCGTGGCAGGGTACTATTCTACCACTAGACCACTGGTGCT
8	Ensembl_Plants	tRNA	13492219	13492291	.	+	.	ID=gene:ENSRNA049444816	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon CGC	sequence=GGGGACGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAGGCACGGGGTTCGATTCCCCGCGTCTCCA	8	Ensembl_Plants	MITE/MITE	13492218	13492291	453	+	.	ID=166430	repeat_name=ORSgTEMT_761479	repeat_type=Unknown	sequence=GGGGACGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAGGCACGGGGTTCGATTCCCCGCGTCTCCA
8	Ensembl_Plants	tRNA	3264188	3264268	.	+	.	ID=gene:ENSRNA049444929	Name=tRNA-Leu	biotype=tRNA	description=tRNA-Leu for anticodon AAG	sequence=GTTGAGATGGCCGAGTTGGTCTAAAGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACA	8	Ensembl_Plants	DNA/unclassified	3264188	3264278	419	+	.	ID=150318	repeat_name=ORSgTETNOOT_623591	repeat_type=Type II Transposons	sequence=TTGAGATGGCCGAGTTGGTCTAAAGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACAGATTATTTTT
9	Ensembl_Plants	tRNA	11580840	11580920	.	+	.	ID=gene:ENSRNA049447822	Name=tRNA-Leu	biotype=tRNA	description=tRNA-Leu for anticodon AAG	sequence=GTTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACA	9	Ensembl_Plants	DNA/unclassified	11580840	11580920	396	+	.	ID=150321	repeat_name=ORSgTETNOOT_623591	repeat_type=Type II Transposons	sequence=TTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACA
9	Ensembl_Plants	tRNA	6534123	6534195	.	+	.	ID=gene:ENSRNA049447923	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon CUU	sequence=GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCG	9	Ensembl_Plants	MITE/MITE	6534120	6534213	557	+	.	ID=171163	repeat_name=ORSgTEMT_622655	repeat_type=Unknown	sequence=AAGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCGCTGTTACTAATTATTTTT
9	Ensembl_Plants	tRNA	6534123	6534195	.	+	.	ID=gene:ENSRNA049447923	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon CUU	sequence=GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCG	9	Ensembl_Plants	LTR	6534119	6534196	616	+	.	ID=235089	repeat_name=LTR_AC183412.5_672	repeat_type=LTRs	sequence=AAAGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCGC
12	Ensembl_Plants	tRNA	1036480	1036552	.	-	.	ID=gene:ENSRNA049443821	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon UGC	sequence=GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGTACGGGGTTCGATCCCCCGCATCTCCA	12	Ensembl_Plants	MITE/MITE	1036480	1036553	500	-	.	ID=166441	repeat_name=ORSgTEMT_761479	repeat_type=Unknown	sequence=AGGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGTACGGGGTTCGATCCCCCGCATCTCC
12	Ensembl_Plants	tRNA	1036480	1036552	.	-	.	ID=gene:ENSRNA049443821	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon UGC	sequence=GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGTACGGGGTTCGATCCCCCGCATCTCCA	12	Ensembl_Plants	LTR	1036477	1036561	285	-	.	ID=261592	repeat_name=LTR_Pp_scaffold_0002_25	repeat_type=LTRs	sequence=ATCATGCGAGGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGTACGGGGTTCGATCCCCCGCATCTCCACT
12	Ensembl_Plants	tRNA	1036480	1036552	.	-	.	ID=gene:ENSRNA049443821	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon UGC	sequence=GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGTACGGGGTTCGATCCCCCGCATCTCCA	12	Ensembl_Plants	LTR	1036462	1036552	600	+	.	ID=261613	repeat_name=LTR_Gm_18_6105	repeat_type=LTRs	sequence=AAATGAATAAAAATAAGTGGAGATGCGGGGGATCGAACCCCGTACCTCTCGCATGCAAAGCGAGCGCTCTACCATTTGAGCTACATCCCC
12	Ensembl_Plants	tRNA	12435434	12435506	.	+	.	ID=gene:ENSRNA049444200	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon CUU	sequence=GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCG	12	Ensembl_Plants	MITE/MITE	12435425	12435506	506	+	.	ID=171171	repeat_name=ORSgTEMT_622655	repeat_type=Unknown	sequence=CAGCCAAAGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCG
12	Ensembl_Plants	tRNA	12435434	12435506	.	+	.	ID=gene:ENSRNA049444200	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon CUU	sequence=GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCG	12	Ensembl_Plants	LTR	12435425	12435538	609	-	.	ID=224210	repeat_name=LTR_AC191331.2_7777	repeat_type=LTRs	sequence=TGCAAAAGAAAATAAAAATTAGAATTTAGCATCGCCCACCGTGGGGCTCGAACCCACGACCACAAGGTTAAGAGCCTTGCGCTCTACCGACTGAGCTAGACGGGCTTTGGCTG
12	Ensembl_Plants	tRNA	3479847	3479919	.	+	.	ID=gene:ENSRNA049444289	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon UGC	sequence=GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGCACGGGGTTCGATCCCCCGCATCTCCA	12	Ensembl_Plants	MITE/MITE	3479846	3479919	509	+	.	ID=166443	repeat_name=ORSgTEMT_761479	repeat_type=Unknown	sequence=GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGCACGGGGTTCGATCCCCCGCATCTCCA
12	Ensembl_Plants	tRNA	3479847	3479919	.	+	.	ID=gene:ENSRNA049444289	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon UGC	sequence=GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGCACGGGGTTCGATCCCCCGCATCTCCA	12	Ensembl_Plants	LTR	3479847	3479933	581	-	.	ID=241186	repeat_name=LTR_Mt_chr_02_162	repeat_type=LTRs	sequence=AAAAAGGTGAATAATGGAGATGCGGGGGATCGAACCCCGTGCCTCTCGCATGCAAAGCGAGCGCTCTACCATTTGAGCTACATCCC
12	Ensembl_Plants	tRNA	230189	230262	.	+	.	ID=gene:ENSRNA049444389	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA	12	Ensembl_Plants	DNA/MuDR	230189	230262	436	+	.	ID=172854	repeat_name=MUDRN2_OS	repeat_type=Type II Transposons	sequence=GCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA
12	Ensembl_Plants	tRNA	230189	230262	.	+	.	ID=gene:ENSRNA049444389	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA	12	Ensembl_Plants	LTR	230186	230276	575	-	.	ID=236412	repeat_name=LTR_Al_scaffold_0002_362	repeat_type=LTRs	sequence=AGTAAAAAATAAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATAGGCCCT
JH370054.2	Ensembl_Plants	tRNA	5	76	.	-	.	ID=gene:ENSRNA049437711	Name=tRNA-Gln	biotype=tRNA	description=tRNA-Gln for anticodon CUG	sequence=GGCCCCATGGTGTAATGGTTAGCACTCAGGACTCTGAATCCTGCGATCCGAGTTCAAATCTCGGTGGGACCT	JH370054.2	Ensembl_Plants	MITE/MITE	5	76	540	-	.	ID=199157	repeat_name=ORSgTEMT_717036	repeat_type=Unknown	sequence=GGCCCCATGGTGTAATGGTTAGCACTCAGGACTCTGAATCCTGCGATCCGAGTTCAAATCTCGGTGGGACC
JH370054.2	Ensembl_Plants	tRNA	491	563	.	-	.	ID=gene:ENSRNA049437891	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon CUU	sequence=GCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCG	JH370054.2	Ensembl_Plants	DNA/unclassified	491	563	580	-	.	ID=170979	repeat_name=ORSgTETN001_675336	repeat_type=Type II Transposons	sequence=GCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGGGTCGTGGGTTCGAGCCCCACGTTGGGC
JH370054.2	Ensembl_Plants	tRNA	491	563	.	-	.	ID=gene:ENSRNA049437891	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon CUU	sequence=GCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCG	JH370054.2	Ensembl_Plants	LTR	491	565	411	-	.	ID=235094	repeat_name=LTR_AC183412.5_672	repeat_type=LTRs	sequence=AAGCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGGGTCGTGGGTTCGAGCCCCACGTTGGGC
JH369872.2	Ensembl_Plants	tRNA	74617	74698	.	+	.	ID=gene:ENSRNA049438214	Name=tRNA-Ser	biotype=tRNA	description=tRNA-Ser for anticodon UGA	sequence=GTCGATATGTCCGAGTGGTTAAGGAGACAGACTTGAAATCTGTTGGGCTTCGCCCGCGCAGGTTCGAACCCTGCTGTCGACG	JH369872.2	Ensembl_Plants	DNATE/EnSPm	74614	74705	443	+	.	ID=178913	repeat_name=O_DNATE5403	repeat_type=Type II Transposons	sequence=TGGTCGATATGTCCGAGTGGTTAAGGAGACAGACTTGAAATCTGTTGGGCTTCGCCCGCGCAGGTTCGAACCCTGCTGTCGACGTTTTTTT
JH369872.2	Ensembl_Plants	tRNA	74617	74698	.	+	.	ID=gene:ENSRNA049438214	Name=tRNA-Ser	biotype=tRNA	description=tRNA-Ser for anticodon UGA	sequence=GTCGATATGTCCGAGTGGTTAAGGAGACAGACTTGAAATCTGTTGGGCTTCGCCCGCGCAGGTTCGAACCCTGCTGTCGACG	JH369872.2	Ensembl_Plants	LTR	74616	74703	333	-	.	ID=239242	repeat_name=LTR_Al_scaffold_0001_223	repeat_type=LTRs	sequence=AAAAACGTCGACAGCAGGGTTCGAACCTGCGCGGGCGAAGCCCAACAGATTTCAAGTCTGTCTCCTTAACCACTCGGACATATCGAC
4	Ensembl_Plants	tRNA	11409716	11409796	.	-	.	ID=gene:ENSRNA049446435	Name=tRNA-Leu	biotype=tRNA	description=tRNA-Leu for anticodon CAG	sequence=GTCAAGATGGCCGAGTTGGTCTAAGGCGCCAGTTTCAGGTACTGGTCCGAAAGGGCATGGGTTCGAATCCCATTCTTGACA	4	Ensembl_Plants	DNA/unclassified	11409706	11409796	449	-	.	ID=150310	repeat_name=ORSgTETNOOT_623591	repeat_type=Type II Transposons	sequence=GTCAAGATGGCCGAGTTGGTCTAAGGCGCCAGTTTCAGGTACTGGTCCGAAAGGGCATGGGTTCGAATCCCATTCTTGACATTCTCTTTT
4	Ensembl_Plants	tRNA	13631352	13631422	.	-	.	ID=gene:ENSRNA049446525	Name=tRNA-Gly	biotype=tRNA	description=tRNA-Gly for anticodon GCC	sequence=GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGGGCA	4	Ensembl_Plants	MITE/MITE	13631344	13631422	322	-	.	ID=103129	repeat_name=ORSgTEMT_717204	repeat_type=Unknown	sequence=GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGGGCAGTATTTT
4	Ensembl_Plants	tRNA	14187804	14187876	.	+	.	ID=gene:ENSRNA049446782	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon UGC	sequence=GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGCACGGGGTTCGATCCCCCGCATCTCCA	4	Ensembl_Plants	MITE/MITE	14187803	14187876	550	+	.	ID=166414	repeat_name=ORSgTEMT_761479	repeat_type=Unknown	sequence=GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGCACGGGGTTCGATCCCCCGCATCTCCA
4	Ensembl_Plants	tRNA	13734708	13734781	.	+	.	ID=gene:ENSRNA049446821	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCATGTTCGAGACCTGCATGGGCCA	4	Ensembl_Plants	DNA/MuDR	13734708	13734781	446	+	.	ID=172846	repeat_name=MUDRN2_OS	repeat_type=Type II Transposons	sequence=GCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCATGTTCGAGACCTGCATGGGCCA
4	Ensembl_Plants	tRNA	7570982	7571054	.	+	.	ID=gene:ENSRNA049446975	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	4	Ensembl_Plants	MITE/MITE	7570982	7571055	613	+	.	ID=166412	repeat_name=ORSgTEMT_761479	repeat_type=Unknown	sequence=GGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCAA
4	Ensembl_Plants	tRNA	7570982	7571054	.	+	.	ID=gene:ENSRNA049446975	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	4	Ensembl_Plants	LTR	7570981	7571083	699	-	.	ID=241189	repeat_name=LTR_Mt_chr_02_162	repeat_type=LTRs	sequence=AAAAAATAGGTTTAACAAAATAAAAAAATTGGAGATGCGGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCC
11	Ensembl_Plants	tRNA	3713474	3713546	.	-	.	ID=gene:ENSRNA049445104	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon UGC	sequence=GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGCACGGGGTTCGATCCCCCGCATCTCCA	11	Ensembl_Plants	MITE/MITE	3713461	3713546	553	-	.	ID=166438	repeat_name=ORSgTEMT_761479	repeat_type=Unknown	sequence=GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGCACGGGGTTCGATCCCCCGCATCTCCAAATTTTTATTTT
11	Ensembl_Plants	tRNA	579834	579916	.	+	.	ID=gene:ENSRNA049445324	Name=tRNA-Leu	biotype=tRNA	description=tRNA-Leu for anticodon CAA	sequence=GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCGATGAGGGCGTGGGTTCAAATCCCACTTCTGACA	11	Ensembl_Plants	DNA/unclassified	579834	579916	644	+	.	ID=150324	repeat_name=ORSgTETNOOT_623591	repeat_type=Type II Transposons	sequence=TCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCGATGAGGGCGTGGGTTCAAATCCCACTTCTGACA
10	Ensembl_Plants	tRNA	9686181	9686253	.	-	.	ID=gene:ENSRNA049443421	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon CUU	sequence=GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCG	10	Ensembl_Plants	MITE/MITE	9686144	9686256	566	-	.	ID=171165	repeat_name=ORSgTEMT_622655	repeat_type=Unknown	sequence=AAAGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCGTTCTTTTTCAATTTTCCCATTCTTTTTTGTTGCTCC
10	Ensembl_Plants	tRNA	9686181	9686253	.	-	.	ID=gene:ENSRNA049443421	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon CUU	sequence=GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCG	10	Ensembl_Plants	LTR	9686166	9686258	426	+	.	ID=226653	repeat_name=LTR_AC196368.2_8628	repeat_type=LTRs	sequence=AAATTGAAAAAGAACGCCCACCGTGGGGCTCGAACCCACGACCACAAGGTTAAGAGCCTTGCGCTCTACCGACTGAGCTAGACGGGCTTTGT
10	Ensembl_Plants	tRNA	14297201	14297271	.	+	.	ID=gene:ENSRNA049443546	Name=tRNA-Gly	biotype=tRNA	description=tRNA-Gly for anticodon GCC	sequence=GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGTGCA	10	Ensembl_Plants	MITE/MITE	14297201	14297285	356	+	.	ID=103139	repeat_name=ORSgTEMT_717204	repeat_type=Unknown	sequence=CACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGTGCAGGTCGATTTTTTTT
10	Ensembl_Plants	tRNA	14297201	14297271	.	+	.	ID=gene:ENSRNA049443546	Name=tRNA-Gly	biotype=tRNA	description=tRNA-Gly for anticodon GCC	sequence=GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGTGCA	10	Ensembl_Plants	MITE/MITE	14297200	14297271	367	-	.	ID=160100	repeat_name=BR_MITE1500	repeat_type=Unknown	sequence=TGCACCAGCCGGGAATCGAACCCGGGTCTGTACCGTGGCAGGGTACTATTCTACCACTAGACCACTGGTGC
10	Ensembl_Plants	tRNA	14176173	14176245	.	+	.	ID=gene:ENSRNA049443565	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon UGC	sequence=GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGCACGGGGTTCGATCCCCCGCATCTCCA	10	Ensembl_Plants	MITE/MITE	14176170	14176252	529	+	.	ID=166435	repeat_name=ORSgTEMT_761479	repeat_type=Unknown	sequence=ACGGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGCACGGGGTTCGATCCCCCGCATCTCCATTTTTTT
10	Ensembl_Plants	tRNA	14176173	14176245	.	+	.	ID=gene:ENSRNA049443565	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon UGC	sequence=GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGCACGGGGTTCGATCCCCCGCATCTCCA	10	Ensembl_Plants	LTR	14176173	14176253	568	-	.	ID=261607	repeat_name=LTR_Gm_18_6105	repeat_type=LTRs	sequence=AAAAAAAATGGAGATGCGGGGGATCGAACCCCGTGCCTCTCGCATGCAAAGCGAGCGCTCTACCATTTGAGCTACATCCC
10	Ensembl_Plants	tRNA	10329908	10329981	.	+	.	ID=gene:ENSRNA049443702	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA	10	Ensembl_Plants	DNA/MuDR	10329908	10329981	436	+	.	ID=172852	repeat_name=MUDRN2_OS	repeat_type=Type II Transposons	sequence=GCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA
10	Ensembl_Plants	tRNA	10329908	10329981	.	+	.	ID=gene:ENSRNA049443702	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA	10	Ensembl_Plants	LTR	10329908	10330021	572	-	.	ID=236410	repeat_name=LTR_Al_scaffold_0002_362	repeat_type=LTRs	sequence=AGAAATTTGAAAAAAAGCAAAAAAAAAAACTAAAAATAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATAGGC
6	Ensembl_Plants	tRNA	43021	43093	.	-	.	ID=gene:ENSRNA049445945	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon CGC	sequence=GGGGGTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAGGCACGGGGTTCGATTCCCCGCACCTCCA	6	Ensembl_Plants	MITE/MITE	43021	43108	464	-	.	ID=166420	repeat_name=ORSgTEMT_761479	repeat_type=Unknown	sequence=GCACGGTAGTAATAAGGGGGTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAGGCACGGGGTTCGATTCCCCGCACCTCC
6	Ensembl_Plants	tRNA	43021	43093	.	-	.	ID=gene:ENSRNA049445945	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon CGC	sequence=GGGGGTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAGGCACGGGGTTCGATTCCCCGCACCTCCA	6	Ensembl_Plants	LTR	43013	43093	495	+	.	ID=261612	repeat_name=LTR_Gm_18_6105	repeat_type=LTRs	sequence=AAACGAATGGAGGTGCGGGGAATCGAACCCCGTGCCTCTCGCATGCGAAGCGAGCGCTCTACCATATGAGCTACACCCCC
6	Ensembl_Plants	tRNA	2456396	2456468	.	-	.	ID=gene:ENSRNA049446007	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	6	Ensembl_Plants	MITE/MITE	2456396	2456468	573	-	.	ID=166422	repeat_name=ORSgTEMT_761479	repeat_type=Unknown	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCC
6	Ensembl_Plants	tRNA	2456396	2456468	.	-	.	ID=gene:ENSRNA049446007	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	6	Ensembl_Plants	LTR	2456381	2456468	668	+	.	ID=241178	repeat_name=LTR_Mt_chr_02_162	repeat_type=LTRs	sequence=CAAAAACAGAAGAATGGAGATGCGGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCC
6	Ensembl_Plants	tRNA	13816830	13816901	.	-	.	ID=gene:ENSRNA049446111	Name=tRNA-Gln	biotype=tRNA	description=tRNA-Gln for anticodon CUG	sequence=GGTCCCATGGTCTAGCGGTTAGGACATTGGACTCTGAATCCAGTAACCCGAGTTCAAATCTCGGTGGGACCT	6	Ensembl_Plants	HELITRON/HELITRON	13816830	13816901	450	-	.	ID=177116	repeat_name=MB_HELITRON3506	repeat_type=Unknown	sequence=GGTCCCATGGTCTAGCGGTTAGGACATTGGACTCTGAATCCAGTAACCCGAGTTCAAATCTCGGTGGGACC
6	Ensembl_Plants	tRNA	16343513	16343593	.	-	.	ID=gene:ENSRNA049446202	Name=tRNA-Leu	biotype=tRNA	description=tRNA-Leu for anticodon AAG	sequence=GTTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACA	6	Ensembl_Plants	DNA/unclassified	16343504	16343593	396	-	.	ID=150313	repeat_name=ORSgTETNOOT_623591	repeat_type=Type II Transposons	sequence=GTTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACAATTATTTT
6	Ensembl_Plants	tRNA	1596153	1596223	.	+	.	ID=gene:ENSRNA049446312	Name=tRNA-Gly	biotype=tRNA	description=tRNA-Gly for anticodon GCC	sequence=GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGTGCA	6	Ensembl_Plants	MITE/MITE	1596153	1596225	354	-	.	ID=160094	repeat_name=BR_MITE1500	repeat_type=Unknown	sequence=GATGCACCAGCCGGGAATCGAACCCGGGTCTGTACCGTGGCAGGGTACTATTCTACCACTAGACCACTGGTG
8	Ensembl_Plants	tRNA	18120864	18120944	.	-	.	ID=gene:ENSRNA049444703	Name=tRNA-Leu	biotype=tRNA	description=tRNA-Leu for anticodon AAG	sequence=GTTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACA	8	Ensembl_Plants	DNA/unclassified	18120862	18120944	403	-	.	ID=150319	repeat_name=ORSgTETNOOT_623591	repeat_type=Type II Transposons	sequence=GTTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACAT
8	Ensembl_Plants	tRNA	11423455	11423527	.	+	.	ID=gene:ENSRNA049444843	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon CUU	sequence=GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCG	8	Ensembl_Plants	MITE/MITE	11423453	11423527	508	-	.	ID=171159	repeat_name=ORSgTEMT_622655	repeat_type=Unknown	sequence=CGCCCACCGTGGGGCTCGAACCCACGACCACAAGGTTAAGAGCCTTGCGCTCTACCGACTGAGCTAGACGGGCT
8	Ensembl_Plants	tRNA	11423455	11423527	.	+	.	ID=gene:ENSRNA049444843	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon CUU	sequence=GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCG	8	Ensembl_Plants	LTR	11423453	11423546	482	-	.	ID=235083	repeat_name=Zm_AC145262.7_1L	repeat_type=LTRs	sequence=CAATAAAAAGGAGAACACGCGCCCACCGTGGGGCTCGAACCCACGACCACAAGGTTAAGAGCCTTGCGCTCTACCGACTGAGCTAGACGGGCT
5	Ensembl_Plants	tRNA	16759038	16759110	.	-	.	ID=gene:ENSRNA049445627	Name=tRNA-Arg	biotype=tRNA	description=tRNA-Arg for anticodon ACG	sequence=GACTCCGTGGCCCAATGGATAAGGCGCTGGTCTACGGAACCAGAGATTCTGGGTTCGATCCCCAGCGGAGTCG	5	Ensembl_Plants	MITE/MITE	16759037	16759110	244	-	.	ID=127403	repeat_name=ORSgTEMT_628878	repeat_type=Unknown	sequence=GACTCCGTGGCCCAATGGATAAGGCGCTGGTCTACGGAACCAGAGATTCTGGGTTCGATCCCCAGCGGAGTCG
5	Ensembl_Plants	tRNA	15338298	15338371	.	-	.	ID=gene:ENSRNA049445569	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATCGGCCA	5	Ensembl_Plants	DNA/MuDR	15338298	15338371	448	-	.	ID=172847	repeat_name=MUDRN2_OS	repeat_type=Type II Transposons	sequence=GGCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATCGGCC
5	Ensembl_Plants	tRNA	15338298	15338371	.	-	.	ID=gene:ENSRNA049445569	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATCGGCCA	5	Ensembl_Plants	LTR	15338246	15338403	611	+	.	ID=236406	repeat_name=LTR_Al_scaffold_0002_362	repeat_type=LTRs	sequence=AAATGAAAAATTGATATTAGGGGGATCAAAATAACTTGAAACTGAAAAAACTGGCCGATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATAGGCCATTTTGTTGTTGGTAAAAAGTGATTAGTATAA
5	Ensembl_Plants	tRNA	14482422	14482502	.	-	.	ID=gene:ENSRNA049445523	Name=tRNA-Leu	biotype=tRNA	description=tRNA-Leu for anticodon CAG	sequence=GTCAAGATGGCCGAGTTGGTCTAAGGCGCCAGTTTCAGGTACTGGTCCGAAAGGGCATGGGTTCGAATCCCATTCTTGACA	5	Ensembl_Plants	DNA/unclassified	14482411	14482502	449	-	.	ID=150311	repeat_name=ORSgTETNOOT_623591	repeat_type=Type II Transposons	sequence=GTCAAGATGGCCGAGTTGGTCTAAGGCGCCAGTTTCAGGTACTGGTCCGAAAGGGCATGGGTTCGAATCCCATTCTTGACATTTATCTTTT
5	Ensembl_Plants	tRNA	3516020	3516090	.	-	.	ID=gene:ENSRNA049445405	Name=tRNA-Gly	biotype=tRNA	description=tRNA-Gly for anticodon GCC	sequence=GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGTGCA	5	Ensembl_Plants	MITE/MITE	3516019	3516091	374	+	.	ID=160093	repeat_name=BR_MITE1500	repeat_type=Unknown	sequence=TGCACCAGCCGGGAATCGAACCCGGGTCTGTACCGTGGCAGGGTACTATTCTACCACTAGACCACTGGTGCT
3	Ensembl_Plants	tRNA	2634146	2634229	.	+	.	ID=gene:ENSRNA049443124	Name=tRNA-Leu	biotype=tRNA	description=tRNA-Leu for anticodon CAA	sequence=GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGGCGTGGGTTCAAATCCCACTTCTGACA	3	Ensembl_Plants	DNA/unclassified	2634146	2634232	659	+	.	ID=150305	repeat_name=ORSgTETNOOT_623591	repeat_type=Type II Transposons	sequence=TCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGGCGTGGGTTCAAATCCCACTTCTGACATTA
3	Ensembl_Plants	tRNA	10132881	10132953	.	+	.	ID=gene:ENSRNA049443042	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon CGC	sequence=GGGGGTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAGGCACGGGGTTCGATTCCCCGCACCTCCA	3	Ensembl_Plants	MITE/MITE	10132880	10132953	482	+	.	ID=166409	repeat_name=ORSgTEMT_761479	repeat_type=Unknown	sequence=GGGGGTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAGGCACGGGGTTCGATTCCCCGCACCTCCA
3	Ensembl_Plants	tRNA	10132881	10132953	.	+	.	ID=gene:ENSRNA049443042	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon CGC	sequence=GGGGGTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAGGCACGGGGTTCGATTCCCCGCACCTCCA	3	Ensembl_Plants	LTR	10132871	10132987	606	-	.	ID=261609	repeat_name=LTR_Gm_18_6105	repeat_type=LTRs	sequence=AAAAAAAAAAAACTGTGTGAATAGCAAAAATAAATGGAGGTGCGGGGAATCGAACCCCGTGCCTCTCGCATGCGAAGCGAGCGCTCTACCATATGAGCTACACCCCCTTTTACGTT
3	Ensembl_Plants	tRNA	13051929	13052009	.	+	.	ID=gene:ENSRNA049442935	Name=tRNA-Leu	biotype=tRNA	description=tRNA-Leu for anticodon CAG	sequence=GTCAAGATGGCCGAGTTGGTCTAAGGCGCCAGTTTCAGGTACTGGTCCGAAAGGGCATGGGTTCGAATCCCATTCTTGACA	3	Ensembl_Plants	DNA/unclassified	13051929	13052009	416	+	.	ID=150307	repeat_name=ORSgTETNOOT_623591	repeat_type=Type II Transposons	sequence=TCAAGATGGCCGAGTTGGTCTAAGGCGCCAGTTTCAGGTACTGGTCCGAAAGGGCATGGGTTCGAATCCCATTCTTGACA
3	Ensembl_Plants	tRNA	14593834	14593906	.	+	.	ID=gene:ENSRNA049442904	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon CUU	sequence=GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCG	3	Ensembl_Plants	MITE/MITE	14593825	14593945	545	+	.	ID=171147	repeat_name=ORSgTEMT_622655	repeat_type=Unknown	sequence=GTACAGAAGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCGTGTTTGATTTTTAATATCGAGGTCAATTTTTTTTTTTTG
3	Ensembl_Plants	tRNA	14593834	14593906	.	+	.	ID=gene:ENSRNA049442904	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon CUU	sequence=GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCG	3	Ensembl_Plants	LTR	14593832	14593906	554	+	.	ID=235086	repeat_name=LTR_AC183412.5_672	repeat_type=LTRs	sequence=AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCG
3	Ensembl_Plants	tRNA	20563685	20563755	.	+	.	ID=gene:ENSRNA049442827	Name=tRNA-Gly	biotype=tRNA	description=tRNA-Gly for anticodon GCC	sequence=GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGTGCA	3	Ensembl_Plants	MITE/MITE	20563685	20563755	354	-	.	ID=160092	repeat_name=BR_MITE1500	repeat_type=Unknown	sequence=TGCACCAGCCGGGAATCGAACCCGGGTCTGTACCGTGGCAGGGTACTATTCTACCACTAGACCACTGGTG
3	Ensembl_Plants	tRNA	21147230	21147301	.	+	.	ID=gene:ENSRNA049442781	Name=tRNA-Gln	biotype=tRNA	description=tRNA-Gln for anticodon CUG	sequence=GGTCCCATGGTCTAGCGGTTAGGACATTGGACTCTGAATCCAGTAACCCGAGTTCAAATCTCGGTGGGACCT	3	Ensembl_Plants	HELITRON/HELITRON	21147230	21147330	476	+	.	ID=177113	repeat_name=MB_HELITRON3506	repeat_type=Unknown	sequence=GTCCCATGGTCTAGCGGTTAGGACATTGGACTCTGAATCCAGTAACCCGAGTTCAAATCTCGGTGGGACCTTGCTTTTTTTTATTTTTTTTTATCCTTCG
3	Ensembl_Plants	tRNA	25295750	25295822	.	+	.	ID=gene:ENSRNA049442732	Name=tRNA-Arg	biotype=tRNA	description=tRNA-Arg for anticodon ACG	sequence=GACTCCGTGGCCCAATGGATAAGGCGTTGGTCTACGGAACCAGAGATTCTGGGTTCGATCCCCAGCGGAGTCG	3	Ensembl_Plants	MITE/MITE	25295750	25295825	260	+	.	ID=127399	repeat_name=ORSgTEMT_628878	repeat_type=Unknown	sequence=ACTCCGTGGCCCAATGGATAAGGCGTTGGTCTACGGAACCAGAGATTCTGGGTTCGATCCCCAGCGGAGTCGTTA
3	Ensembl_Plants	tRNA	26760094	26760164	.	+	.	ID=gene:ENSRNA049442698	Name=tRNA-Gly	biotype=tRNA	description=tRNA-Gly for anticodon GCC	sequence=GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGTGCA	3	Ensembl_Plants	MITE/MITE	26760094	26760173	392	+	.	ID=103126	repeat_name=ORSgTEMT_717204	repeat_type=Unknown	sequence=CACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGTGCATTTCTTTTT
3	Ensembl_Plants	tRNA	27787514	27787597	.	+	.	ID=gene:ENSRNA049442673	Name=tRNA-Leu	biotype=tRNA	description=tRNA-Leu for anticodon CAA	sequence=GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGGCGTGGGTTCAAATCCCACTTCTGACA	3	Ensembl_Plants	DNA/unclassified	27787514	27787597	653	+	.	ID=150308	repeat_name=ORSgTETNOOT_623591	repeat_type=Type II Transposons	sequence=TCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGGCGTGGGTTCAAATCCCACTTCTGACA
3	Ensembl_Plants	tRNA	25891562	25891635	.	-	.	ID=gene:ENSRNA049442513	Name=tRNA-Glu	biotype=tRNA	description=tRNA-Glu for anticodon UUC	sequence=TCCATTGTCGTCTAGTCCGGTTAGGATACCTGGCTTTCACCCAGGCGACCCGGGTTCAAATCCCGGCAATGGAA	3	Ensembl_Plants	DNATE/MuDR	25891553	25891645	252	+	.	ID=176866	repeat_name=Rufi_InComplete_DNATE48	repeat_type=Type II Transposons	sequence=AAAAAAAGTTCCATTGCCGGGATTTGAACCCGGGTCGCCTGGGTGAAAGCCAGGTATCCTAACCGGACTAGACGACAATGGATTTGTTGTGT
3	Ensembl_Plants	tRNA	12986998	12987071	.	-	.	ID=gene:ENSRNA049442317	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA	3	Ensembl_Plants	DNA/MuDR	12986998	12987071	436	-	.	ID=172842	repeat_name=MUDRN2_OS	repeat_type=Type II Transposons	sequence=GGCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCC
3	Ensembl_Plants	tRNA	12986998	12987071	.	-	.	ID=gene:ENSRNA049442317	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA	3	Ensembl_Plants	LTR	12986979	12987082	622	+	.	ID=236408	repeat_name=LTR_Al_scaffold_0002_362	repeat_type=LTRs	sequence=ATAAAAAAAAGGAAAAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATAGGCCATGTGATATTT
3	Ensembl_Plants	tRNA	12530322	12530394	.	-	.	ID=gene:ENSRNA049442214	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	3	Ensembl_Plants	MITE/MITE	12530307	12530395	624	-	.	ID=166411	repeat_name=ORSgTEMT_761479	repeat_type=Unknown	sequence=AGGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCAATTCTAATTTTTTA
3	Ensembl_Plants	tRNA	9194661	9194741	.	-	.	ID=gene:ENSRNA049442070	Name=tRNA-Leu	biotype=tRNA	description=tRNA-Leu for anticodon AAG	sequence=GTTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACA	3	Ensembl_Plants	DNA/unclassified	9194661	9194741	396	-	.	ID=150306	repeat_name=ORSgTETNOOT_623591	repeat_type=Type II Transposons	sequence=GTTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAAC
3	Ensembl_Plants	tRNA	2245786	2245856	.	-	.	ID=gene:ENSRNA049441858	Name=tRNA-Gly	biotype=tRNA	description=tRNA-Gly for anticodon GCC	sequence=GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGTGCA	3	Ensembl_Plants	MITE/MITE	2245786	2245857	360	+	.	ID=160089	repeat_name=BR_MITE1500	repeat_type=Unknown	sequence=GCACCAGCCGGGAATCGAACCCGGGTCTGTACCGTGGCAGGGTACTATTCTACCACTAGACCACTGGTGCT
7	Ensembl_Plants	tRNA	2283705	2283775	.	+	.	ID=gene:ENSRNA049447453	Name=tRNA-Gly	biotype=tRNA	description=tRNA-Gly for anticodon GCC	sequence=GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGTGCA	7	Ensembl_Plants	MITE/MITE	2283705	2283775	322	-	.	ID=160097	repeat_name=BR_MITE1500	repeat_type=Unknown	sequence=TGCACCAGCCGGGAATCGAACCCGGGTCTGTACCGTGGCAGGGTACTATTCTACCACTAGACCACTGGTG
7	Ensembl_Plants	tRNA	15978241	15978314	.	+	.	ID=gene:ENSRNA049447313	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA	7	Ensembl_Plants	DNA/MuDR	15978241	15978314	436	+	.	ID=172848	repeat_name=MUDRN2_OS	repeat_type=Type II Transposons	sequence=GCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA
7	Ensembl_Plants	tRNA	15978241	15978314	.	+	.	ID=gene:ENSRNA049447313	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA	7	Ensembl_Plants	LTR	15978219	15978323	539	-	.	ID=236403	repeat_name=LTR_Al_scaffold_0002_362	repeat_type=LTRs	sequence=AAAAATAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATAGGCCAATTGTTAAATTCATTAAACT
7	Ensembl_Plants	tRNA	16381424	16381496	.	+	.	ID=gene:ENSRNA049447292	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	7	Ensembl_Plants	MITE/MITE	16381424	16381525	634	+	.	ID=166423	repeat_name=ORSgTEMT_761479	repeat_type=Unknown	sequence=GGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCATTTAGCAATGTTAGTTTTTAAACTTCCAT
7	Ensembl_Plants	tRNA	16381424	16381496	.	+	.	ID=gene:ENSRNA049447292	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	7	Ensembl_Plants	MITE/MITE	16381424	16381525	682	+	.	ID=166424	repeat_name=ORSgTEMT_761479	repeat_type=Unknown	sequence=GGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCATTTAGCAATGTTAGTTTTTAAACTTCCAT
7	Ensembl_Plants	tRNA	16381424	16381496	.	+	.	ID=gene:ENSRNA049447292	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	7	Ensembl_Plants	LTR	16381409	16381497	721	-	.	ID=261599	repeat_name=LTR_Gm_18_6105	repeat_type=LTRs	sequence=ATGGAGATGCGGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCAATTTGTCTAAAAT
7	Ensembl_Plants	tRNA	18429785	18429855	.	-	.	ID=gene:ENSRNA049447214	Name=tRNA-Gly	biotype=tRNA	description=tRNA-Gly for anticodon GCC	sequence=GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGTGCA	7	Ensembl_Plants	MITE/MITE	18429775	18429855	362	-	.	ID=103138	repeat_name=ORSgTEMT_717204	repeat_type=Unknown	sequence=GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGTGCATTTTCTTTT
7	Ensembl_Plants	tRNA	18225777	18225849	.	-	.	ID=gene:ENSRNA049447199	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon CGC	sequence=GGGGGTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAGGCACGGGGTTCGATTCCCCGCACCTCCA	7	Ensembl_Plants	MITE/MITE	18225777	18225849	440	-	.	ID=166425	repeat_name=ORSgTEMT_761479	repeat_type=Unknown	sequence=GGGGGTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAGGCACGGGGTTCGATTCCCCGCACCTCC
7	Ensembl_Plants	tRNA	18225777	18225849	.	-	.	ID=gene:ENSRNA049447199	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon CGC	sequence=GGGGGTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAGGCACGGGGTTCGATTCCCCGCACCTCCA	7	Ensembl_Plants	LTR	18225761	18225856	596	+	.	ID=261598	repeat_name=LTR_Gm_18_6105	repeat_type=LTRs	sequence=TGAAAAATTGATGAATGGAGGTGCGGGGAATCGAACCCCGTGCCTCTCGCATGCGAAGCGAGCGCTCTACCATATGAGCTACACCCCCATTTTGT
7	Ensembl_Plants	tRNA	15938667	15938747	.	-	.	ID=gene:ENSRNA049447163	Name=tRNA-Leu	biotype=tRNA	description=tRNA-Leu for anticodon CAG	sequence=GTCAAGATGGCCGAGTTGGTCTAAGGCGCCAGTTTCAGGTACTGGTCCGAAAGGGCATGGGTTCGAATCCCATTCTTGACA	7	Ensembl_Plants	DNA/unclassified	15938664	15938747	433	-	.	ID=150317	repeat_name=ORSgTETNOOT_623591	repeat_type=Type II Transposons	sequence=GTCAAGATGGCCGAGTTGGTCTAAGGCGCCAGTTTCAGGTACTGGTCCGAAAGGGCATGGGTTCGAATCCCATTCTTGACATC
2	Ensembl_Plants	tRNA	4436001	4436081	.	+	.	ID=gene:ENSRNA049441555	Name=tRNA-Leu	biotype=tRNA	description=tRNA-Leu for anticodon AAG	sequence=GTTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACA	2	Ensembl_Plants	DNA/unclassified	4436001	4436094	435	+	.	ID=150301	repeat_name=ORSgTETNOOT_623591	repeat_type=Type II Transposons	sequence=TTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACATCCAATTTTTTTT
2	Ensembl_Plants	tRNA	15477844	15477916	.	+	.	ID=gene:ENSRNA049441366	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon CGC	sequence=GGGGACGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAGGCACGGGGTTCGATTCCCCGCGTCTCCA	2	Ensembl_Plants	MITE/MITE	15477844	15477927	507	+	.	ID=166405	repeat_name=ORSgTEMT_761479	repeat_type=Unknown	sequence=GGGACGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAGGCACGGGGTTCGATTCCCCGCGTCTCCATTCATTTTTTT
2	Ensembl_Plants	tRNA	15477844	15477916	.	+	.	ID=gene:ENSRNA049441366	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon CGC	sequence=GGGGACGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAGGCACGGGGTTCGATTCCCCGCGTCTCCA	2	Ensembl_Plants	LTR	15477840	15477975	595	-	.	ID=261605	repeat_name=LTR_Gm_18_6105	repeat_type=LTRs	sequence=TAAAAAAGAAAAATGGCACAATTCCTAAACATTGTGAATGATCTAAGTAAAAAAATGAATGGAGACGCGGGGAATCGAACCCCGTGCCTCTCGCATGCGAAGCGAGCGCTCTACCATATGAGCTACGTCCCCACT
2	Ensembl_Plants	tRNA	15534557	15534638	.	+	.	ID=gene:ENSRNA049441328	Name=tRNA-Ser	biotype=tRNA	description=tRNA-Ser for anticodon AGA	sequence=GTGGTCGTGCCGGAGTGGTTATCGGGCATGACTAGAAATCATGTGGGCTTTGCCCGCGCAGGTTCGAATCCTGCCGACCACG	2	Ensembl_Plants	DNATE/EnSPm	15534556	15534647	426	+	.	ID=178897	repeat_name=O_DNATE5403	repeat_type=Type II Transposons	sequence=GTGGTCGTGCCGGAGTGGTTATCGGGCATGACTAGAAATCATGTGGGCTTTGCCCGCGCAGGTTCGAATCCTGCCGACCACGTTTCTTTTT
2	Ensembl_Plants	tRNA	15534557	15534638	.	+	.	ID=gene:ENSRNA049441328	Name=tRNA-Ser	biotype=tRNA	description=tRNA-Ser for anticodon AGA	sequence=GTGGTCGTGCCGGAGTGGTTATCGGGCATGACTAGAAATCATGTGGGCTTTGCCCGCGCAGGTTCGAATCCTGCCGACCACG	2	Ensembl_Plants	LTR	15534554	15534639	647	-	.	ID=239236	repeat_name=LTR_Al_scaffold_0001_223	repeat_type=LTRs	sequence=ACGTGGTCGGCAGGATTCGAACCTGCGCGGGCAAAGCCCACATGATTTCTAGTCATGCCCGATAACCACTCCGGCACGACCACAT
2	Ensembl_Plants	tRNA	21852485	21852556	.	+	.	ID=gene:ENSRNA049441212	Name=tRNA-Gln	biotype=tRNA	description=tRNA-Gln for anticodon CUG	sequence=GGTCCCATGGTCTAGTGGTCAGGACATTGGACTCTGAATCCAGTAACCCGAGTTCAAATCTCGGTGGGACCT	2	Ensembl_Plants	HELITRON/HELITRON	21852485	21852557	496	+	.	ID=177112	repeat_name=MB_HELITRON3506	repeat_type=Unknown	sequence=GTCCCATGGTCTAGTGGTCAGGACATTGGACTCTGAATCCAGTAACCCGAGTTCAAATCTCGGTGGGACCTC
2	Ensembl_Plants	tRNA	26523640	26523723	.	-	.	ID=gene:ENSRNA049441142	Name=tRNA-Leu	biotype=tRNA	description=tRNA-Leu for anticodon CAA	sequence=GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGGCGTGGGTTCAAATCCCACTTCTGACA	2	Ensembl_Plants	DNA/unclassified	26523627	26523723	659	-	.	ID=150304	repeat_name=ORSgTETNOOT_623591	repeat_type=Type II Transposons	sequence=GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGGCGTGGGTTCAAATCCCACTTCTGACATTAATTTTTTTT
2	Ensembl_Plants	tRNA	17709312	17709382	.	-	.	ID=gene:ENSRNA049440898	Name=tRNA-Gly	biotype=tRNA	description=tRNA-Gly for anticodon GCC	sequence=GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGTGCA	2	Ensembl_Plants	MITE/MITE	17709312	17709383	367	+	.	ID=160088	repeat_name=BR_MITE1500	repeat_type=Unknown	sequence=GCACCAGCCGGGAATCGAACCCGGGTCTGTACCGTGGCAGGGTACTATTCTACCACTAGACCACTGGTGCT
2	Ensembl_Plants	tRNA	15898664	15898744	.	-	.	ID=gene:ENSRNA049440738	Name=tRNA-Leu	biotype=tRNA	description=tRNA-Leu for anticodon CAG	sequence=GTCAAGATGGCCGAGTTGGTCTAAGGCGCCAGTTTCAGGTACTGGTCCGAAAGGGCATGGGTTCGAATCCCATTCTTGACA	2	Ensembl_Plants	DNA/unclassified	15898661	15898744	423	-	.	ID=150303	repeat_name=ORSgTETNOOT_623591	repeat_type=Type II Transposons	sequence=GTCAAGATGGCCGAGTTGGTCTAAGGCGCCAGTTTCAGGTACTGGTCCGAAAGGGCATGGGTTCGAATCCCATTCTTGACAAC
2	Ensembl_Plants	tRNA	11467821	11467891	.	-	.	ID=gene:ENSRNA049440567	Name=tRNA-Gly	biotype=tRNA	description=tRNA-Gly for anticodon GCC	sequence=GCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGTGCA	2	Ensembl_Plants	MITE/MITE	11467821	11467892	360	+	.	ID=160087	repeat_name=BR_MITE1500	repeat_type=Unknown	sequence=GCACCAGCCGGGAATCGAACCCGGGTCTGTACCGTGGCAGGGTACTATTCTACCACTAGACCACTGGTGCT
2	Ensembl_Plants	tRNA	6653903	6653974	.	-	.	ID=gene:ENSRNA049440402	Name=tRNA-Gln	biotype=tRNA	description=tRNA-Gln for anticodon UUG	sequence=GGTTCCATAGTGTAGAGGTTAGCACTCCAGACTTTGAATCTGGCAACCTGGGTTCAAATCCCGGTGGGACCT	2	Ensembl_Plants	MITE/MITE	6653903	6653974	446	-	.	ID=199149	repeat_name=ORSgTEMT_717036	repeat_type=Unknown	sequence=GGTTCCATAGTGTAGAGGTTAGCACTCCAGACTTTGAATCTGGCAACCTGGGTTCAAATCCCGGTGGGACC
2	Ensembl_Plants	tRNA	6652439	6652510	.	-	.	ID=gene:ENSRNA049440385	Name=tRNA-Gln	biotype=tRNA	description=tRNA-Gln for anticodon UUG	sequence=GGTTCCATAGTGTAGAGGTTAGCACTCCAGACTTTGAATCTGGCAACCTGGGTTCGAATCCCGGTGGGACCT	2	Ensembl_Plants	HELITRON/HELITRON	6652437	6652510	451	-	.	ID=177109	repeat_name=MB_HELITRON3506	repeat_type=Unknown	sequence=GGTTCCATAGTGTAGAGGTTAGCACTCCAGACTTTGAATCTGGCAACCTGGGTTCGAATCCCGGTGGGACCTC
2	Ensembl_Plants	pre_miRNA	24810795	24810892	.	-	.	ID=gene:ENSRNA049466545	Name=MIR164	biotype=pre_miRNA	description=microRNA MIR164	sequence=CAGACCGTGCTGGAGAAGCAGGGCACGTGCTCGACGGCTAGGCTTGCAGGCCGCAGCTTGGCTTAGCAGCATGTGCGTTCCTTCTCCAGCATGGCTTC	2	Ensembl_Plants	LTR	24810762	24810903	417	+	.	ID=226650	repeat_name=LTR_AC196368.2_8628	repeat_type=LTRs	sequence=CCGCGGCGGCGATCGATCGACCGACGGGGCGAGAAGCCATGCTGGAGAAGGAACGCACATGCTGCTAAGCCAAGCTGCGGCCTGCAAGCCTAGCCGTCGAGCACGTGCCCTGCTTCTCCAGCACGGTCTGCTCACCCCTCC
7	Ensembl_Plants	pre_miRNA	9735183	9735279	.	+	.	ID=gene:ENSRNA049466815	Name=MIR439	biotype=pre_miRNA	description=microRNA MIR439	sequence=GCAGGGCCTGTCAAACTGCCCCTGTTCGATAGGGGGCCTGTCTAACTTTGGCAGTTAGACAAGCCCCCCTGTCGAACCGCCAAAGTTAGACAGGCCT	7	Ensembl_Plants	MITE/MITE	9735189	9735476	895	-	.	ID=157726	repeat_name=ORSgTEMT_645800	repeat_type=Unknown	sequence=ATTTTTTTTAAGAATTAATATTATTTTAATGGAAAATCACAAAAGTAGAGGCCATCCGTGAAAAATTACAAATTTAGGGGTCTATCGAACGGTGAACGTTGGACTGGAGCCTATCAAATGGAGGGAGTTCGACAGGACCCACCACCCATTCGACTAGTGAGCCAGCTGGACCTGTCGAACTGCCACAGTTTGATAGGAGGCCTGTCTAACTTTGGCGGTTCGACAGGGGGGCTTGTCTAACTGCCAAAGTTAGACAGGCCCCCTATCGAACAGGGGCAGTTTGACAG
7	Ensembl_Plants	pre_miRNA	9735183	9735279	.	+	.	ID=gene:ENSRNA049466815	Name=MIR439	biotype=pre_miRNA	description=microRNA MIR439	sequence=GCAGGGCCTGTCAAACTGCCCCTGTTCGATAGGGGGCCTGTCTAACTTTGGCAGTTAGACAAGCCCCCCTGTCGAACCGCCAAAGTTAGACAGGCCT	7	Ensembl_Plants	LTR/Gypsy	9735276	9735308	515	+	.	ID=279488	repeat_name=LTR_Os_chr_07_1336	repeat_type=LTRs	sequence=CCTCCTATCAAACTGTGGCAGTTCGACAGGTC
7	Ensembl_Plants	pre_miRNA	9735183	9735279	.	+	.	ID=gene:ENSRNA049466815	Name=MIR439	biotype=pre_miRNA	description=microRNA MIR439	sequence=GCAGGGCCTGTCAAACTGCCCCTGTTCGATAGGGGGCCTGTCTAACTTTGGCAGTTAGACAAGCCCCCCTGTCGAACCGCCAAAGTTAGACAGGCCT	7	Ensembl_Plants	LTR/Gypsy	9735187	9735474	543	-	.	ID=279489	repeat_name=LTR_Os_chr_07_1336	repeat_type=LTRs	sequence=TTTTTTTAAGAATTAATATTATTTTAATGGAAAATCACAAAAGTAGAGGCCATCCGTGAAAAATTACAAATTTAGGGGTCTATCGAACGGTGAACGTTGGACTGGAGCCTATCAAATGGAGGGAGTTCGACAGGACCCACCACCCATTCGACTAGTGAGCCAGCTGGACCTGTCGAACTGCCACAGTTTGATAGGAGGCCTGTCTAACTTTGGCGGTTCGACAGGGGGGCTTGTCTAACTGCCAAAGTTAGACAGGCCCCCTATCGAACAGGGGCAGTTTGACAGGC
7	Ensembl_Plants	pre_miRNA	9735183	9735279	.	+	.	ID=gene:ENSRNA049466815	Name=MIR439	biotype=pre_miRNA	description=microRNA MIR439	sequence=GCAGGGCCTGTCAAACTGCCCCTGTTCGATAGGGGGCCTGTCTAACTTTGGCAGTTAGACAAGCCCCCCTGTCGAACCGCCAAAGTTAGACAGGCCT	7	Ensembl_Plants	LTR	9735220	9735479	676	+	.	ID=279677	repeat_name=LTR_Os_chr_01_71	repeat_type=LTRs	sequence=TGTCTAACTTTGGCAGTTAGACAAGCCCCCCTGTCGAACCGCCAAAGTTAGACAGGCCTCCTATCAAACTGTGGCAGTTCGACAGGTCCAGCTGGCTCACTAGTCGAATGGGTGGTGGGTCCTGTCGAACTCCCTCCATTTGATAGGCTCCAGTCCAACGTTCACCGTTCGATAGACCCCTAAATTTGTAATTTTTCACGGATGGCCTCTACTTTTGTGATTTTCCATTAAAATAATATTAATTCTTAAAAAAAATTCA
7	Ensembl_Plants	pre_miRNA	9735183	9735279	.	+	.	ID=gene:ENSRNA049466815	Name=MIR439	biotype=pre_miRNA	description=microRNA MIR439	sequence=GCAGGGCCTGTCAAACTGCCCCTGTTCGATAGGGGGCCTGTCTAACTTTGGCAGTTAGACAAGCCCCCCTGTCGAACCGCCAAAGTTAGACAGGCCT	7	Ensembl_Plants	LTR	9735028	9735275	837	-	.	ID=279678	repeat_name=LTR_Os_chr_01_71	repeat_type=LTRs	sequence=CTGTCTAACTTTGGCGGTTCGACAGGGGGGCTTGTCTAACTGCCAAAGTTAGACAGGCCCCCTATCGAACAGGGGCAGTTTGACAGGCCCTGCCCAACTGCAACGCTAGCTATCTAGTCCGATCTCCTCCCCAGTCGACTGTTGGCCGTTCGATAGGGGTCCTATTGAACTACGGCAGTTCGACAAGACCCTAAATTTGCGATTTTTCACGGATGCCCTCTAATTTTATGATTTTCCATTAAAAAAA
6	Ensembl_Plants	pre_miRNA	21214231	21214417	.	-	.	ID=gene:ENSRNA049464968	Name=mir-166	biotype=pre_miRNA	description=mir-166 microRNA precursor	sequence=TTTGAGGGGAATGTTGTCTGGCTCGGGGCTACTTTAAATTTCTCTCTCTATCTCCATCTCTCTCCTCTCTCTCTCTCTCTCCTAGCTTGATCTTTTTGATCTCTTGAAATCAATCCCAAGAAAATATCAGATGGAGAGATGAGAGTAGATGTTTGTAGATCTCGGACCAGGCTTCATTCCCCCCAAA	6	Ensembl_Plants	LTR/Gypsy	21214328	21214386	236	+	.	ID=192173	repeat_name=pun_Truncated_LTR_2122	repeat_type=LTRs	sequence=CAAGCTAGGAGAGAGAGAGAGAGAGGAGAGAGATGGAGATAGAGAGAGAAATTTAAAG
3	Ensembl_Plants	pre_miRNA	9276883	9277019	.	+	.	ID=gene:ENSRNA049464699	Name=MIR164	biotype=pre_miRNA	description=microRNA MIR164	sequence=TTGTGCAGGGTGGAGAAGCAGGGCACGTGAAGGGCCATCCAGCTGTGTAGCTTCGCCGGGTGCCCAAACTGTCGATGGCGGCGAATGTGCATGCTGTGGATGGCCGTTCATGTGTTCGTCTTCTCCACCGAGCACGG	3	Ensembl_Plants	LTR/Copia	9276389	9277110	1477	-	.	ID=70902	repeat_name=ji_276N13-3	repeat_type=LTRs	sequence=TACGTAGTTTGTCTTGTTTTTCAACTCACGCACAGTGCAGGACGACGAAGAGATTGATCGTGACGAACGATGGCTGGGGTCTCGGGTATGCCCGTGCTCGGTGGAGAAGACGAACACATGAACGGCCATCCACAGCATGCACATTCGCCGCCATCGACAGTTTGGGCACCCGGCGAAGCTACACAGCTGGATGGCCCTTCACGTGCCCTGCTTCTCCACCCTGCACAAGCACACCAATATATTTATCGATCGACGCGAGTACACGACCAGATGCCCAGGCATGATCGGTGGGTAGAATCGAGCCACAGCAAGCTTGCACAATTTATACTGGGGGAGACGATCGAACAGCGTCGGCCCCTCGTTGACGGCAGATTTCGAGCTTTGGTGCCAAGAAGCAGGAGGAAAACAAGGGCTTTTGTGGCCGTAGGACGCAGGTTCCTTTCGCACAAGTGGTAGAGGCAAGGACACGCGTGCCGTGGGCAAACCGATGGATGGTGTTGTCTTACTCTCGCCAGGCGCCGTCGCGGCTGCGGCGATCCTTGGTGGTTTCCCCCTCAATTCCGGTGAATTGGAGACAGCCAGGCCAAGACAGCGCCCGGAAAGCAAGAAGAGCAGCGATCGATCATGCGTGCTGGCATGTGACTGGTGTATGGTATGGAGTCCTGCACCGCACTCCTGCATGCACGATGAGAGCTCAGGTGTTCCTTTCAGGCTTACAGCA
6	Ensembl_Plants	pre_miRNA	7858397	7858492	.	-	.	ID=gene:ENSRNA049464120	Name=MIR439	biotype=pre_miRNA	description=microRNA MIR439	sequence=AGGGGGCCTATCTAACTACCGCAGTTAGACAGGGGCATGTCTTACTATGGCAGTTTGATAGGCCCCCCTGTCGAACGGTGGCAGTTCGACAGGCTC	6	Ensembl_Plants	DNA/unclassified	7858229	7858697	1108	-	.	ID=133377	repeat_name=ORSgTETNOOT_682956	repeat_type=Type II Transposons	sequence=GAATTTTATTTGAGAATTAACATCATTCTAATAAAAAATCACGAAATTAGAAGCCATGCATGAAAAATCGTAAATTTAGGGTCCTGTCGAACTGCCGTAGTTCGATAGGACCTTAACGAATGGTCAGCAGTCGACTGGGCAGGAGATCGAACTAGATCGCCAGTGTTGTAGTTCGATAGGGCATGTCAAACTACCCCTGTTCGATAGGGGGCCTATCTAACTACCGCAGTTAGACAGGGGCATGTCTTACTATGGCAGTTTGATAGGCCCCCCTGTCGAACGGTGGCAGTTCGACAGGCTCGGCTGGCTCAGCAGTCGAACAGGTGGTGGGCTCTGTTAAACTCCATCCGTTCGATAGACCCTAGACAAACGTCCATCGTTTGATAAACTTCTAAATTCGCGATTTCCTTTGGATAGCCTCTACTCTAGCGATTTTCCATTGAAATAATATTAATTCTCAAAAAAATT
6	Ensembl_Plants	pre_miRNA	7858397	7858492	.	-	.	ID=gene:ENSRNA049464120	Name=MIR439	biotype=pre_miRNA	description=microRNA MIR439	sequence=AGGGGGCCTATCTAACTACCGCAGTTAGACAGGGGCATGTCTTACTATGGCAGTTTGATAGGCCCCCCTGTCGAACGGTGGCAGTTCGACAGGCTC	6	Ensembl_Plants	LTR/Gypsy	7858229	7858518	608	+	.	ID=279472	repeat_name=LTR_Os_chr_07_1336	repeat_type=LTRs	sequence=AATTTTTTTGAGAATTAATATTATTTCAATGGAAAATCGCTAGAGTAGAGGCTATCCAAAGGAAATCGCGAATTTAGAAGTTTATCAAACGATGGACGTTTGTCTAGGGTCTATCGAACGGATGGAGTTTAACAGAGCCCACCACCTGTTCGACTGCTGAGCCAGCCGAGCCTGTCGAACTGCCACCGTTCGACAGGGGGGCCTATCAAACTGCCATAGTAAGACATGCCCCTGTCTAACTGCGGTAGTTAGATAGGCCCCCTATCGAACAGGGGTAGTTTGACATGCC
8	Ensembl_Plants	pre_miRNA	16877640	16877821	.	+	.	ID=gene:ENSRNA049462511	Name=MIR169_2	biotype=pre_miRNA	description=microRNA MIR169_2	sequence=AGTTCTGGTAGCCAAGGATGACTTGCCTGTGTGTGTGTATATATATATATATATATATACATATACATGCATACATATATATATATATATGTGCCTGATCAGTCTATGATTCTTGATTGCAGCTGATCACATATATGATATAATTAGTACAGGCAGTCTCCTTGGCTAGCCCGGCTGCCTCT	8	Ensembl_Plants	DNA/En-Spm	16877770	16877781	296	-	.	ID=13836	repeat_name=trep1802	repeat_type=Type II Transposons	sequence=TATATCATATA
8	Ensembl_Plants	pre_miRNA	16877640	16877821	.	+	.	ID=gene:ENSRNA049462511	Name=MIR169_2	biotype=pre_miRNA	description=microRNA MIR169_2	sequence=AGTTCTGGTAGCCAAGGATGACTTGCCTGTGTGTGTGTATATATATATATATATATATACATATACATGCATACATATATATATATATATGTGCCTGATCAGTCTATGATTCTTGATTGCAGCTGATCACATATATGATATAATTAGTACAGGCAGTCTCCTTGGCTAGCCCGGCTGCCTCT	8	Ensembl_Plants	MITE/MITE	16877662	16877729	386	+	.	ID=141131	repeat_name=BR_MITE1380	repeat_type=Unknown	sequence=TGCCTGTGTGTGTGTATATATATATATATATATATACATATACATGCATACATATATATATATATAT
8	Ensembl_Plants	pre_miRNA	16877640	16877821	.	+	.	ID=gene:ENSRNA049462511	Name=MIR169_2	biotype=pre_miRNA	description=microRNA MIR169_2	sequence=AGTTCTGGTAGCCAAGGATGACTTGCCTGTGTGTGTGTATATATATATATATATATATACATATACATGCATACATATATATATATATATGTGCCTGATCAGTCTATGATTCTTGATTGCAGCTGATCACATATATGATATAATTAGTACAGGCAGTCTCCTTGGCTAGCCCGGCTGCCTCT	8	Ensembl_Plants	DNA/hAT	16877677	16877756	361	-	.	ID=173378	repeat_name=YIREN	repeat_type=Type II Transposons	sequence=ATCAAGAATCATAGACTGATCAGGCACATATATATATATATATGTATGCATGTATATGTATATATATATATATATATAT
8	Ensembl_Plants	pre_miRNA	16877640	16877821	.	+	.	ID=gene:ENSRNA049462511	Name=MIR169_2	biotype=pre_miRNA	description=microRNA MIR169_2	sequence=AGTTCTGGTAGCCAAGGATGACTTGCCTGTGTGTGTGTATATATATATATATATATATACATATACATGCATACATATATATATATATATGTGCCTGATCAGTCTATGATTCTTGATTGCAGCTGATCACATATATGATATAATTAGTACAGGCAGTCTCCTTGGCTAGCCCGGCTGCCTCT	8	Ensembl_Plants	LTR/Gypsy/U	16877650	16877661	375	+	.	ID=185364	repeat_name=MC_Truncated_LTR5200	repeat_type=LTRs	sequence=CCAAGGATGAC
8	Ensembl_Plants	pre_miRNA	16877640	16877821	.	+	.	ID=gene:ENSRNA049462511	Name=MIR169_2	biotype=pre_miRNA	description=microRNA MIR169_2	sequence=AGTTCTGGTAGCCAAGGATGACTTGCCTGTGTGTGTGTATATATATATATATATATATACATATACATGCATACATATATATATATATATGTGCCTGATCAGTCTATGATTCTTGATTGCAGCTGATCACATATATGATATAATTAGTACAGGCAGTCTCCTTGGCTAGCCCGGCTGCCTCT	8	Ensembl_Plants	LTR/Copia	16877666	16877756	360	-	.	ID=234517	repeat_name=LTR_Gm_11_3635	repeat_type=LTRs	sequence=ATCAAGAATCATAGACTGATCAGGCACATATATATATATATATGTATGCATGTATATGTATATATATATATATATATATACACACACACA
8	Ensembl_Plants	pre_miRNA	16877640	16877821	.	+	.	ID=gene:ENSRNA049462511	Name=MIR169_2	biotype=pre_miRNA	description=microRNA MIR169_2	sequence=AGTTCTGGTAGCCAAGGATGACTTGCCTGTGTGTGTGTATATATATATATATATATATACATATACATGCATACATATATATATATATATGTGCCTGATCAGTCTATGATTCTTGATTGCAGCTGATCACATATATGATATAATTAGTACAGGCAGTCTCCTTGGCTAGCCCGGCTGCCTCT	8	Ensembl_Plants	LTR/Gypsy	16877637	16877729	405	+	.	ID=261716	repeat_name=LTR_Gm_01_55	repeat_type=LTRs	sequence=TGAGTTCTGGTAGCCAAGGATGACTTGCCTGTGTGTGTGTATATATATATATATATATATACATATACATGCATACATATATATATATATAT
8	Ensembl_Plants	pre_miRNA	16877640	16877821	.	+	.	ID=gene:ENSRNA049462511	Name=MIR169_2	biotype=pre_miRNA	description=microRNA MIR169_2	sequence=AGTTCTGGTAGCCAAGGATGACTTGCCTGTGTGTGTGTATATATATATATATATATATACATATACATGCATACATATATATATATATATGTGCCTGATCAGTCTATGATTCTTGATTGCAGCTGATCACATATATGATATAATTAGTACAGGCAGTCTCCTTGGCTAGCCCGGCTGCCTCT	8	Ensembl_Plants	LTR	16877757	16877769	363	+	.	ID=263397	repeat_name=LTR_Sb1_00293_1378	repeat_type=LTRs	sequence=GCAGCTGATCAC
11	Ensembl_Plants	pre_miRNA	1379984	1380174	.	-	.	ID=gene:ENSRNA049462193	Name=MIR159	biotype=pre_miRNA	description=microRNA MIR159	sequence=TAAGAGGAAGACGAGCTCCCTGTCGATCCAATTCAGGAGAGGAAGTGGTAGGATGCAGCTCCCGGTTCATGGATACCTCGGGAGTGCATGGCAATGTCATAGGCTTGCACTTGCATGGGTTTGCATGACCTGGGAGATGAGCCCGTCATCGTCTTTCTCTATTGATTGGATTGAAGGGAGCTCTACATGTA	11	Ensembl_Plants	LTR	1379987	1380281	1344	+	.	ID=297938	repeat_name=LTR_Os_chr_01_31	repeat_type=LTRs	sequence=TGTAGAGCTCCCTTCAATCCAATCAATAGAGAAAGACGATGACGGGCTCATCTCCCAGGTCATGCAAACCCATGCAAGTGCAAGCCTATGACATTGCCATGCACTCCCGAGGTATCCATGAACCGGGAGCTGCATCCTACCACTTCCTCTCCTGAATTGGATCGACAGGGAGCTCGTCTTCCTCTTATCCCCTTCACAACATAGCACTATAGCCATCTTCTACTTGTTTCAAGCAAAAAAAAAAAGAGAGAGAGAGAGACAAAGTATATAAAAAAGAGGTGACGAAGCTGGCTA
2	Ensembl_Plants	pre_miRNA	2798936	2799113	.	+	.	ID=gene:ENSRNA049461038	Name=MIR807	biotype=pre_miRNA	description=microRNA MIR807	sequence=AACTGCCACAGCCTCTTCCGGGTTCTACATGGTGCTGACGTAGCATACCATATGGATGCTGATGTGGCATCATCTTTAATAGAGTCAGTCATTGCAGAGTTAAAGATGATGCCACACTATCGTCCATGTGGCATGCCACGTTAGTGTCACGTAGGATTTTAAAGGGGTTGTGGCAGTT	2	Ensembl_Plants	LTR/Copia	2799033	2799227	857	-	.	ID=17222	repeat_name=Zm_AC146974.4_6L_WD	repeat_type=LTRs	sequence=GAATAAAGTGTTTAGCTGGTCTCTAAACTTGTTTGCCTGTGTCATTTAGGTCGTCATACTCCCAAAATGCACATCTGGTCCTAGAACTTGTTAAAGTATGACATTTAGATCCTCAACTGCCACAACCCCTTTAAAATCCTACGTGACACTAACGTGGCATGCCACATGGACGATAGTGTGGCATCATCTTTAAC
2	Ensembl_Plants	pre_miRNA	2798936	2799113	.	+	.	ID=gene:ENSRNA049461038	Name=MIR807	biotype=pre_miRNA	description=microRNA MIR807	sequence=AACTGCCACAGCCTCTTCCGGGTTCTACATGGTGCTGACGTAGCATACCATATGGATGCTGATGTGGCATCATCTTTAATAGAGTCAGTCATTGCAGAGTTAAAGATGATGCCACACTATCGTCCATGTGGCATGCCACGTTAGTGTCACGTAGGATTTTAAAGGGGTTGTGGCAGTT	2	Ensembl_Plants	MITE/MITE	2798821	2799011	931	-	.	ID=196337	repeat_name=g_MITE1063	repeat_type=Unknown	sequence=AAGATGATGCCACATCAGCATCCATATGGTATGCTACGTCAGCACCATGTAGAACCCGGAAGAGGCTGTGGCAGTTTGAGATCTAGATGGCACACTTTAGCAAGTTCTAAAATCTAGATGCATATTTTGAGAGTATATGGATCTAGATGACACAGGCGAGCAAGTTTAGGTACCGATTGTGCACTTTACT
5	Ensembl_Plants	pre_miRNA	9307389	9307508	.	-	.	ID=gene:ENSRNA049460589	Name=MIR164	biotype=pre_miRNA	description=microRNA MIR164	sequence=CCGTGCATGGTGGAGAAGCAGGGCACGTGCAATACCATCCATGGACGCCGCCTCCTCCTCCTGGAGTGGAGCATGGGCATGGATGGTTCTTCATGTGCCCGTCTTCTCCACCGAGCACGC	5	Ensembl_Plants	LTR/Copia	9307391	9307506	357	+	.	ID=70938	repeat_name=ji_276N13-3	repeat_type=LTRs	sequence=TGCTCGGTGGAGAAGACGGGCACATGAAGAACCATCCATGCCCATGCTCCACTCCAGGAGGAGGAGGCGGCGTCCATGGATGGTATTGCACGTGCCCTGCTTCTCCACCATGCAC
3	Ensembl_Plants	SRP_RNA	4056965	4057272	.	+	.	ID=gene:ENSRNA049464899	Name=Plant_SRP	biotype=SRP_RNA	description=Plant signal recognition particle RNA	sequence=GCCGAGCTCAGTAGCGAGGGCTTGTAACCCATGTGGGGGCATTAAGGTGGCGTGAATGTTTGGTGCGGAATCGGGGCCTGGGTTCATTGGTGTAACTATGCCGGCCTGCCCGTTCCAAGTTGAGTAGTGGTCGGATGGGCTTTGGCGAAAGCCATGGGCCTATCCGGCTCTAAAGTGGCAGGCAAAGCGTGAGGCTGGTTTCACAGAGCAGCGATCACTGCCCGCTTCCAACGGTGGAAGGATAACAGGCTGCTGCGCCATGAGCCCGCTTCTGGCCCAGATTCCCACTAAAACAGACCACCATCTTT	3	Ensembl_Plants	LTR	4056930	4057284	1050	-	.	ID=227693	repeat_name=LTR_AC198290.2_10424	repeat_type=LTRs	sequence=AAAATAATAAAAAAAGATGGTGGTCTGTTTTAGTGGGAATCTGGGCCAGAAGCGGGCTCATGGCGCAGCAGCCTGTTATCCTTCCACCGTTGGAAGCGGGCAGTGATCGCTGCTCTGTGAAACCAGCCTCACGCTTTGCCTGCCACTTTAGAGCCGGATAGGCCCATGGCTTTCGCCAAAGCCCATCCGACCACTACTCAACTTGGAACGGGCAGGCCGGCATAGTTACACCAATGAACCCAGGCCCCGATTCCGCACCAAACATTCACGCCACCTTAATGCCCCCACATGGGTTACAAGCCCTCGCTACTGAGCTCGGCAAGGGATGGTCTGTGGGTTGAATATTTAAGGGGG
super0056	Ensembl_Plants	snoRNA	67390	67541	.	+	.	ID=gene:ENSRNA049467387	Name=Plant_U3	biotype=snoRNA	description=Plant small nucleolar RNA U3	sequence=ATGACCTTACTTGAACAGGATCTGTTCTATAGGCTTGTACCGTTGCATCCTTTACCACGAAGGAGGCAAGCACAAAAAAAAAAGGAGGAATAGAATTCGTTCTTGGATCTCCTTAAAGATGTCCTGTTTGCATGGTATCCAATGAATTTTTT	super0056	Ensembl_Plants	DNA/unclassified	67533	67781	618	+	.	ID=133426	repeat_name=ORSgTETNOOT_682956	repeat_type=Type II Transposons	sequence=AATTTTTTGGATAAATATTATTCTTTTTATGGAAAATCAAAATTGGAGTTCGTCTGTGGAAAATCGCAAAACTAGTAGCCAGTCGAACATCGGTAGAGCGATAGGTGAACAATCGAACGGCCGATCAGTGACTGGTTGATCGACAGTACCTGTTGAATGAAGGTCGTTTGACTAGGGTGCTGTCGTCCTACTAACGATCGACAGGGCGAGCGAAGTACCCTGTCGAACTCCCTCAGTTCGACAGCTCC
super0056	Ensembl_Plants	snoRNA	67390	67541	.	+	.	ID=gene:ENSRNA049467387	Name=Plant_U3	biotype=snoRNA	description=Plant small nucleolar RNA U3	sequence=ATGACCTTACTTGAACAGGATCTGTTCTATAGGCTTGTACCGTTGCATCCTTTACCACGAAGGAGGCAAGCACAAAAAAAAAAGGAGGAATAGAATTCGTTCTTGGATCTCCTTAAAGATGTCCTGTTTGCATGGTATCCAATGAATTTTTT	super0056	Ensembl_Plants	LTR/Gypsy/U	67347	67392	227	+	.	ID=198472	repeat_name=MC_Truncated_LTR5497	repeat_type=LTRs	sequence=AGTAGGATGTGTTGTAAGATGATACAAAGGAGGAATAGAGTTATG
6	Ensembl_Plants	snoRNA	1224371	1224448	.	-	.	ID=gene:ENSRNA049464091	Name=SNORD36	biotype=snoRNA	description=Small nucleolar RNA SNORD36	sequence=GCCAAATGATGCTAAATATGTTATTGCTGAGTCTATCTTTGAAGACTAACAAAATCGAGCTTTTTAAAACTGATGGTT	6	Ensembl_Plants	DNA/En-Spm	1224334	1224398	250	+	.	ID=227174	repeat_name=trep4066	repeat_type=Type II Transposons	sequence=GTATCTAGACAATAATTTTCAAGCAATGGATAGGCCAACCATCAGTTTTAAAAAGCTCGATTTT
2	Ensembl_Plants	snoRNA	471282	471389	.	-	.	ID=gene:ENSRNA049461249	Name=snoZ118	biotype=snoRNA	description=Small nucleolar RNA Z118/Z121/Z120	sequence=TGTTTGCGGTGATGATTCCTACAAGGACGGTATCTGAGTAAGGTGACTCTTGAAAGAGAATGCCTTGCGTGATTACATCCTAAACTGATCAGAGATTCTGAGCAAGCA	2	Ensembl_Plants	DNA/En-Spm	471267	471393	482	-	.	ID=262258	repeat_name=DTC_unnamedfam46_3B_075_E20-1	repeat_type=Type II Transposons	sequence=TGATTGTTTGCGGTGATGATTCCTACAAGGACGGTATCTGAGTAAGGTGACTCTTGAAAGAGAATGCCTTGCGTGATTACATCCTAAACTGATCAGAGATTCTGAGCAAGCATATATTAATCTGAA
2	Ensembl_Plants	snoRNA	470999	471106	.	-	.	ID=gene:ENSRNA049461234	Name=snoZ118	biotype=snoRNA	description=Small nucleolar RNA Z118/Z121/Z120	sequence=TGTTTGCCATGATGATTCCTACAAGGACGGTATCTGAGTACGGAACCTCTTGAAAGAGTGCTCCTCACATGATTACTTCCAAAACTGATCAGAGATTCTGAGCAAACA	2	Ensembl_Plants	DNA/En-Spm	470983	471111	426	-	.	ID=262259	repeat_name=DTC_unnamedfam46_3B_075_E20-1	repeat_type=Type II Transposons	sequence=TTGATTGTTTGCCATGATGATTCCTACAAGGACGGTATCTGAGTACGGAACCTCTTGAAAGAGTGCTCCTCACATGATTACTTCCAAAACTGATCAGAGATTCTGAGCAAACACATGCAATTCTGAAT
2	Ensembl_Plants	snoRNA	470686	470790	.	-	.	ID=gene:ENSRNA049461127	Name=snoZ118	biotype=snoRNA	description=Small nucleolar RNA Z118/Z121/Z120	sequence=TGCTTGCTGTGAGGATTCTTGTAAGGACGATATCTGAGTAAGGAACCACTTAAAAAGTGCTCCTCACATGATTATATCCAATACTGATCAGAGACTGAGCAAATG	2	Ensembl_Plants	DNA/En-Spm	470670	470841	288	-	.	ID=262260	repeat_name=DTC_unnamedfam46_3B_075_E20-1	repeat_type=Type II Transposons	sequence=TGCTTTGGTGTTAATATATAAGCCCATTAAGATTTTTATTTTCCATTTTCTTGCTTGCTGTGAGGATTCTTGTAAGGACGATATCTGAGTAAGGAACCACTTAAAAAGTGCTCCTCACATGATTATATCCAATACTGATCAGAGACTGAGCAAATGTGTGTAAATTTGTAT
2	Ensembl_Plants	snoRNA	469846	469940	.	-	.	ID=gene:ENSRNA049461025	Name=snoZ118	biotype=snoRNA	description=Small nucleolar RNA Z118/Z121/Z120	sequence=TGCTTGGTGACTCCTACAAGGATGGTATCTGAGTAAGGTGGCTCTTGAATGAGCTTACCTGATTACATCCAATACTTAAATATTTGGAGCAAGCA	2	Ensembl_Plants	DNA/En-Spm	469874	469956	231	-	.	ID=262261	repeat_name=DTC_unnamedfam46_3B_075_E20-1	repeat_type=Type II Transposons	sequence=TTAAGTTTTGTTAGTCTGCTTGGTGACTCCTACAAGGATGGTATCTGAGTAAGGTGGCTCTTGAATGAGCTTACCTGATTAC
super1266	Ensembl_Plants	sense_intronic	193	323	.	-	.	ID=gene:ENSRNA049467092	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=GAGAGCCGTGTGATGGGTGACTATCTAGCACGGTTCAGAGAGCACGTGTATGTAGTCTGCGCTGGTGAATGGAAGCCCCCGCCGCAAAAAAGAAGCGGCTCTTCCCACGGCTCTGTCACCATTGACTCTAT	super1266	Ensembl_Plants	LTR	179	269	805	+	.	ID=241122	repeat_name=LTR_Os_chr_11_2029	repeat_type=LTRs	sequence=ACCATAATAATAAATAGAGTCAATGGTGACAGAGCCGTGGGAAGAGCCGCTTCTTTTTTGCGGCGGGGGCTTCCATTCACCAGCGCAGAC
super3764	Ensembl_Plants	sense_intronic	87	139	.	+	.	ID=gene:ENSRNA049466844	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=AGGAGCCGTATGAGGCGGAAGCTCCACGTACGGTTTTGAAGCCGAGCCTTTCC	super3764	Ensembl_Plants	LTR	86	137	255	+	.	ID=307119	repeat_name=LTR_Os_chr_04_669	repeat_type=LTRs	sequence=AGGAGCCGTATGAGGCGGAAGCTCCACGTACGGTTTTGAAGCCGAGCCTTT
10	Ensembl_Plants	sense_intronic	3208421	3208494	.	+	.	ID=gene:ENSRNA049466432	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=GAAAGCCGTATTCGATGAAAGTCGTATGTATGGTTTGGAGGGAGATCTTTCCTATCTTTCGAGATCCACCTTAC	10	Ensembl_Plants	LTR/Gypsy	3208269	3208561	1960	-	.	ID=245187	repeat_name=RLG_Gk_DX403759.1_7620	repeat_type=LTRs	sequence=ATCCGTTTTCTTTTTATAAGGGCTAAAAACAAATCGCTTATTTTTTTGGCTTTTTCACCCCCATATTGTAAGGTGGATCTCGAAAGATAGGAAAGATCTCCCTCCAAACCATACATACGACTTTCATCGAATACGGCTTTCCACAGAATTCAATAGGGATCTATGAGATCGAGTATGGAATTCAGTTTACTCACTTAAAATTGAGTATCCGTTTCCCTCCTTTTCCCGCTAGGATCGGAAATCCTGTATTTTCCATATCCATACGATCAAGTCCTTAGGTTTCCGAAATAGT
2	Ensembl_Plants	sense_intronic	13593583	13593670	.	+	.	ID=gene:ENSRNA049464348	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=GAGAGCCAAATGAATCGAAAGATTCATGTTTGGTTCGGGAAGAGATCATAAAAGTTGTAAACTTAATAGCAAGGTAATCTACTTTCAT	2	Ensembl_Plants	LTR	13593430	13593797	2682	-	.	ID=307084	repeat_name=LTR_Os_chr_04_669	repeat_type=LTRs	sequence=AGTTCAAGATTCAATTGTAATCGAATTCGAGCTTTTTCGAGCTGCTCAATGGTTCCTCTACGCAATTCTTCCGAATTTCGAATAGTACTCAAGATCCTCTGTTTTCGATTATCTAATAAATCTTTTAATGAAAGTAGATTACCTTGCTATTAAGTTTACAACTTTTATGATCTCTTCCCGAACCAAACATGAATCTTTCGATTCATTTGGCTCTCACGCTCTTTTTTTCTTTTTTTGCTATGGCTGGCTATTTCCATATCTTTTTTTTAATGTAATGAGCCTATCCTCTACCCTCTGTTTTCTGCTTATATTTCAATATAGCGAAACGCATATAAGACTAGATAAATATTAAGAGGACTCTTACGCC