1	Ensembl_Plants	snRNA	40833250	40833407	.	-	.	ID=gene:ENSRNA049459352	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=ATACTTACCTGGACGGGGTCGATGGGCGATCAAGAAGGCCCATGGCCTAGATCAGTGGCCCACATTGCACTTGGGTGCGCTGGTCTACCATCTCCCCAAGTGGGAGAGTGGACGTCATAATTTGTGGCAGAGGGGGTACGCGTTCGCGCGGCCCCCGC	1	Ensembl_Plants	LTR	40833245	40833408	763	-	.	ID=35372	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=CATACTTACCTGGACGGGGTCGATGGGCGATCAAGAAGGCCCATGGCCTAGATCAGTGGCCCACATTGCACTTGGGTGCGCTGGTCTACCATCTCCCCAAGTGGGAGAGTGGACGTCATAATTTGTGGCAGAGGGGGTACGCGTTCGCGCGGCCCCCGCCAAT
1	Ensembl_Plants	snRNA	40828893	40829053	.	-	.	ID=gene:ENSRNA049459336	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=ATACTTACCTGGACGGGGTCGATGGGCGATCAAGAAGGCCCATGGCCTAGATCAGTGGCCCACATTGCACTTGGTGGGTGCGCTGGTCTACCATCTCCCCAAGTGGGAGAGTGGATGTCATAATTTGTGGCAGAGGGGGTACGCGTTCGCGCGGCCCCTGC	1	Ensembl_Plants	LTR	40828888	40829054	756	-	.	ID=35373	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=CATACTTACCTGGACGGGGTCGATGGGCGATCAAGAAGGCCCATGGCCTAGATCAGTGGCCCACATTGCACTTGGTGGGTGCGCTGGTCTACCATCTCCCCAAGTGGGAGAGTGGATGTCATAATTTGTGGCAGAGGGGGTACGCGTTCGCGCGGCCCCTGCCAAT
1	Ensembl_Plants	snRNA	40549990	40550150	.	+	.	ID=gene:ENSRNA049459325	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=ATACTTACCTGGACGGGGTCGATGGGCGATCAAGATGGCCCATGGCCTAGATCAGTGGCCCACATTGCACTTGGTGGGTGCGCTGGTCTACCATCTCCCCAAGTGGGAGAGTGGACGTCATAATTTGTGGTAGAGGGGGTACGCGTTCGCGCGGCCCCCGC	1	Ensembl_Plants	LTR	40549989	40550155	770	+	.	ID=35374	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=ATACTTACCTGGACGGGGTCGATGGGCGATCAAGATGGCCCATGGCCTAGATCAGTGGCCCACATTGCACTTGGTGGGTGCGCTGGTCTACCATCTCCCCAAGTGGGAGAGTGGACGTCATAATTTGTGGTAGAGGGGGTACGCGTTCGCGCGGCCCCCGCCAATT
4	Ensembl_Plants	snRNA	4109946	4110048	.	-	.	ID=gene:ENSRNA049458952	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTCGGAGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACAAGCACAAATCGAGAAATGGTCCAAATTTTT	4	Ensembl_Plants	LTR	4109944	4110049	618	-	.	ID=145808	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TGTCTCTTCGGAGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACAAGCACAAATCGAGAAATGGTCCAAATTTTTT
4	Ensembl_Plants	snRNA	3883528	3883688	.	+	.	ID=gene:ENSRNA049458941	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=ATACTTACCTGGACGGGGTCTATGGGCGATCAAGAAGATCCATGGCCTAGATCAATGATCCACATTGCACTTAGTGGATGCGTTGGTTTACCATCTCCTCAAGTAGGAGAGTGGACGTCGTAATTTGTGGTAGAGGGGGTACGCGTTCGCGCGGCCCCTAC	4	Ensembl_Plants	LTR	3883539	3883637	331	+	.	ID=35366	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=ACGGGGTCTATGGGCGATCAAGAAGATCCATGGCCTAGATCAATGATCCACATTGCACTTAGTGGATGCGTTGGTTTACCATCTCCTCAAGTAGGAGA
3	Ensembl_Plants	snRNA	9346540	9346699	.	-	.	ID=gene:ENSRNA049457717	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=ATACTTACCTGGACGGGGTCGATGGCCAATCAAGAAGGGTCATGGCCTAGGTTAGCGGCCTCCATTGCACTTGGGAGGAGCGCTGGCCTACCATCTCCCCAAGTGGGAGAGTGGACGTCATAATTTGTGAAGAGGGGGTACGCGTTCGCGCGGCCCCTAC	3	Ensembl_Plants	LTR	9346502	9346712	816	-	.	ID=35367	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=GCAATCATGATCCATACTTACCTGGACGGGGTCGATGGCCAATCAAGAAGGGTCATGGCCTAGGTTAGCGGCCTCCATTGCACTTGGGAGGAGCGCTGGCCTACCATCTCCCCAAGTGGGAGAGTGGACGTCATAATTTGTGAAGAGGGGGTACGCGTTCGCGCGGCCCCTACCAATTCTAAATTAAATAAAATTAAAATTTGGTTTTGA
6	Ensembl_Plants	snRNA	35665594	35665714	.	-	.	ID=gene:ENSRNA049457522	Name=U5	biotype=snRNA	description=U5 spliceosomal RNA	sequence=AGCTGCGCGGTGAGCACAGAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCGCGCCGCACGTAGCAGCATACGCCTATTTTTGGAGGGTGCTCCCCCTTACCGTGAGGGCC	6	Ensembl_Plants	LTR	35665618	35665731	575	-	.	ID=13984	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=CCGTTCCAAAACCACGCAGCTGCGCGGTGAGCACAGAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCGCGCCGCACGTAGCAGCATACGCCTATTTTTGGAG
6	Ensembl_Plants	snRNA	31930754	31930950	.	+	.	ID=gene:ENSRNA049457463	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGAGGCACCGCCTCACAAATGATATTAAATTTATTTTTTATGGGGGAGGATCTTGATGATGGCTTGCCATTTGGGTCCTCAAGCGTCGCTCGAGCGTTGCACTACAGCTTGAGCTTGGCGCGCCCCAA	6	Ensembl_Plants	LTR	31930759	31930823	282	+	.	ID=13985	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=TTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGT
7	Ensembl_Plants	snRNA	28804271	28804431	.	-	.	ID=gene:ENSRNA049457198	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=ATACTTACCTGGACGGGGTCTATGGCCGATCAAGAAGGGTCATGGCCTAAGTCAGTGGCCTCCATTGCACTTGGGAGGAGCACGGGCTTACCATCTCCTCAAGCAGGAGAGTGGACGTCGTAATTTGTGGTAGAGGGGGTACGCGTTCGCGCGGCCCCTAC	7	Ensembl_Plants	LTR	28804274	28804444	787	-	.	ID=35369	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=GCAGCTTAGAAACATACTTACCTGGACGGGGTCTATGGCCGATCAAGAAGGGTCATGGCCTAAGTCAGTGGCCTCCATTGCACTTGGGAGGAGCACGGGCTTACCATCTCCTCAAGCAGGAGAGTGGACGTCGTAATTTGTGGTAGAGGGGGTACGCGTTCGCGCGGCCC
9	Ensembl_Plants	snRNA	2019423	2019583	.	-	.	ID=gene:ENSRNA049456482	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=ATACTTACCTGGACGGGATCGACGGGCGATCAAGAAGGCCCGTGGCCTAGGTCAGTGGCCCGCATTGCACTTGGCGGGTGCGCTGGCTTACCATCTCCCCAAGTGGGAGAGTGGACGTCATAATTTGTGGCAGAGGGGGTACGCGTTCGCGCGGCCCCCGC	9	Ensembl_Plants	LTR	2019418	2019584	697	-	.	ID=35378	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=CATACTTACCTGGACGGGATCGACGGGCGATCAAGAAGGCCCGTGGCCTAGGTCAGTGGCCCGCATTGCACTTGGCGGGTGCGCTGGCTTACCATCTCCCCAAGTGGGAGAGTGGACGTCATAATTTGTGGCAGAGGGGGTACGCGTTCGCGCGGCCCCCGCCAAT
9	Ensembl_Plants	snRNA	1670848	1671008	.	+	.	ID=gene:ENSRNA049456454	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=ATACTTACCTGGACGGGGTCGACGGGCGATCAAGAAGGTCCGTGGCCTAGGTCAGTGGCCCGCATTGCACTTGGCGGGTGCGCTGGCTTACCATCTCCCCAAGTGGGAGAGTGGACGTCATAATTTGTGGTAGAGGGGGTACGCGTTCGCGCGGCCCCCGC	9	Ensembl_Plants	LTR	1670847	1671013	741	+	.	ID=35379	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=ATACTTACCTGGACGGGGTCGACGGGCGATCAAGAAGGTCCGTGGCCTAGGTCAGTGGCCCGCATTGCACTTGGCGGGTGCGCTGGCTTACCATCTCCCCAAGTGGGAGAGTGGACGTCATAATTTGTGGTAGAGGGGGTACGCGTTCGCGCGGCCCCCGCCAATT
9	Ensembl_Plants	snRNA	14431371	14431567	.	+	.	ID=gene:ENSRNA049456266	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGACCATGCGTCCACTTCGATATTAAATTTATTTTTTGTGGGGGAGGGACCACCACAGTGGCTTGCCACTGGGTCCCTCGGGCGTCGCTCAGGCGTTGCACTGCTGCCCGGGCCTGGCGCACCCCAA	9	Ensembl_Plants	LTR	14431376	14431442	285	+	.	ID=13990	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=TTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGG
9	Ensembl_Plants	snRNA	14425673	14425869	.	+	.	ID=gene:ENSRNA049456251	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATGCGCCCACTTCGATATTAAATTTATTTTTTGTGGGGGAGGGACCACCACAGTGGCTTGCCACTGGGTCCCTCGAGCGTCGCCTAGGCGTTGCACTGCTGCTCAGGCCTGGCGCACCCCAA	9	Ensembl_Plants	LTR	14425678	14425744	285	+	.	ID=13991	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=TTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGG
9	Ensembl_Plants	snRNA	14450317	14450435	.	-	.	ID=gene:ENSRNA049456149	Name=U5	biotype=snRNA	description=U5 spliceosomal RNA	sequence=AGCTGCGTGGTGAGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCACGCCACAATAAGCAGCATACCCCAATTTTTGGAGGGTGCTTTCTCCTTGAGGAAGCG	9	Ensembl_Plants	LTR	14450322	14450435	573	-	.	ID=13988	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=AGCTGCGTGGTGAGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCACGCCACAATAAGCAGCATACCCCAATTTTTGGAGGGTGCTTTCTCCTTGAG
9	Ensembl_Plants	snRNA	14441183	14441293	.	+	.	ID=gene:ENSRNA049456143	Name=U5	biotype=snRNA	description=U5 spliceosomal RNA	sequence=AGCTGCGTGGTGAGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCACGCCACAATAAGCAGCATACCCCAATTTTTGGAGGGTGCTTTCTCCTTG	9	Ensembl_Plants	LTR	14441183	14441296	577	+	.	ID=13989	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=GCTGCGTGGTGAGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCACGCCACAATAAGCAGCATACCCCAATTTTTGGAGGGTGCTTTCTCCTTGAGG
5	Ensembl_Plants	snRNA	41139883	41140043	.	+	.	ID=gene:ENSRNA049455735	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=TTACTTACCTGGACGGGGTCTATGGGTGATCAAGGATACCCATGGCCTAGATCAATGGTCCACATTGCACACGGTGGAAGTGTTGGTCTACCATCTCCTCAAGTAGGAGAGTGGACGTCATAATTTATGGTAGAGGGGGTACGCGTTCGCGCGGCCCCTAT	5	Ensembl_Plants	LTR	41139879	41140064	815	+	.	ID=35364	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=AACTTACTTACCTGGACGGGGTCTATGGGTGATCAAGGATACCCATGGCCTAGATCAATGGTCCACATTGCACACGGTGGAAGTGTTGGTCTACCATCTCCTCAAGTAGGAGAGTGGACGTCATAATTTATGGTAGAGGGGGTACGCGTTCGCGCGGCCCCTATCAAATCATAGTTCAAATTTGT
5	Ensembl_Plants	snRNA	41325298	41325443	.	-	.	ID=gene:ENSRNA049455724	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=AACCTGGACGGGGTCAACGGTTGACCAAGAAGAGCCATGGCCTAGGTTAGCGGCTTCCACTGCACTTCGGAGGAGCGCTAGCCTACCATCTTCTCAAGTAGGAGAGTGGACGTCATAATTAGGGTACGCGTTCGCGCGGTTCCTAC	5	Ensembl_Plants	LTR	41325274	41325471	636	-	.	ID=35362	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=GCAAGGATACCAAGTAAACGTCAGGTGCAACCTGGACGGGGTCAACGGTTGACCAAGAAGAGCCATGGCCTAGGTTAGCGGCTTCCACTGCACTTCGGAGGAGCGCTAGCCTACCATCTTCTCAAGTAGGAGAGTGGACGTCATAATTAGGGTACGCGTTCGCGCGGTTCCTACCAATTTGTTAAATTTAAAATTTA
5	Ensembl_Plants	snRNA	41313386	41313512	.	-	.	ID=gene:ENSRNA049455703	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=ATACTTACCTGGACGGGGTAAGCGGCCTCCATTGCACTTGGGAGGAGCTCTTGCCTACCATCTCCTCAAGTAGGAGGGTGGACGCCATAATTTGTGGTGGAGGGGTATTGGTTTGTGCGTCTACCAA	5	Ensembl_Plants	LTR	41313395	41313525	348	-	.	ID=35363	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=GCAACATTGATCCATACTTACCTGGACGGGGTAAGCGGCCTCCATTGCACTTGGGAGGAGCTCTTGCCTACCATCTCCTCAAGTAGGAGGGTGGACGCCATAATTTGTGGTGGAGGGGTATTGGTTTGTG
5	Ensembl_Plants	snRNA	5137677	5137873	.	+	.	ID=gene:ENSRNA049454742	Name=U2	biotype=snRNA	description=U2 spliceosomal RNA	sequence=ATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATGTGCCCACTTCGATATTAAATTTATTTTTTGTGGGGGAGGATCCACCACAGTGGCTTGCCACTGGGATCTTCGAGCGTCGCTTGGGCTTTGCACTACTGCCCTAGCCTGGCGCACCCCAA	5	Ensembl_Plants	LTR	5137682	5137748	287	+	.	ID=13983	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=TTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGG
1	Ensembl_Plants	snRNA	38164925	38165085	.	+	.	ID=gene:ENSRNA049454501	Name=U1	biotype=snRNA	description=U1 spliceosomal RNA	sequence=ATACTTACCTGGACGGGGTCGATGGGCGATCATGAAGGCCCATGGCCTAGATCAGTGGCCCACATTGCACTTGGTGGGTGCGCTGGTCTACCATCTCCCCAAGTGGGAGAGTGGACGTCATAATTTGTGGTAGAGGGGGTACGCGTTCGCGCGGCCCCCGC	1	Ensembl_Plants	LTR	38164924	38165091	770	+	.	ID=35375	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=ATACTTACCTGGACGGGGTCGATGGGCGATCATGAAGGCCCATGGCCTAGATCAGTGGCCCACATTGCACTTGGTGGGTGCGCTGGTCTACCATCTCCCCAAGTGGGAGAGTGGACGTCATAATTTGTGGTAGAGGGGGTACGCGTTCGCGCGGCCCCCGCCAATCT
8	Ensembl_Plants	snRNA	32663282	32663384	.	+	.	ID=gene:ENSRNA049453250	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTCGGAGACATCTTCCTAAATTGGAACAATACGGAGAAGATTAGCATTACCCCTGTGGAAGGATGACATGCACAAATTGAGGACTCGTCCAAATTTTT	8	Ensembl_Plants	LTR	32663254	32663395	686	+	.	ID=146022	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=ATAAGCCAAAGATTCATCCCTCGCAATGTCTCTTCGGAGACATCTTCCTAAATTGGAACAATACGGAGAAGATTAGCATTACCCCTGTGGAAGGATGACATGCACAAATTGAGGACTCGTCCAAATTTTTTTAAATTTTCG
8	Ensembl_Plants	snRNA	34047868	34047970	.	-	.	ID=gene:ENSRNA049453264	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=GTCTCTTCGGAGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTT	8	Ensembl_Plants	LTR	34047856	34047972	738	-	.	ID=145933	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TTGTCTCTTCGGAGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTTTTGGGATTTTG
2	Ensembl_Plants	snRNA	3753184	3753288	.	-	.	ID=gene:ENSRNA049452727	Name=U6	biotype=snRNA	description=U6 spliceosomal RNA	sequence=CGTCTCTTCGGAGACGCCCCCTCTCAACTTGGAATGATACAGAGAAGATTAGCATGGCCCTGCGCATGGATGACACGCACAAATTGAGGAAAGGTCCAATTTTTT	2	Ensembl_Plants	LTR	3753183	3753289	627	-	.	ID=146104	repeat_name=LTR_Sb_chr_02_53	repeat_type=LTRs	sequence=TCGTCTCTTCGGAGACGCCCCCTCTCAACTTGGAATGATACAGAGAAGATTAGCATGGCCCTGCGCATGGATGACACGCACAAATTGAGGAAAGGTCCAATTTTTT
9	Ensembl_Plants	snRNA	49093182	49093301	.	-	.	ID=gene:ENSRNA049452641	Name=U5	biotype=snRNA	description=U5 spliceosomal RNA	sequence=AGCTGCGTGGTGAGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCTCGCCACAACAAGCAGCATACGCCAATTTTTGGAGGGATCCCTTCTCTTTGTGAGAGGC	9	Ensembl_Plants	LTR	49093205	49093305	616	-	.	ID=13986	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=TTGGAGCTGCGTGGTGAGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCTCGCCACAACAAGCAGCATACGCCAATTTTTGGAG
9	Ensembl_Plants	snRNA	45301565	45301685	.	-	.	ID=gene:ENSRNA049452621	Name=U5	biotype=snRNA	description=U5 spliceosomal RNA	sequence=AGCTGCGCAGTGGGCACAGAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCCCGCTGCAATAAGCAGCATACGCCTATTTTTTTAGGGATCCATCTTCTTGTGAGAAGGAT	9	Ensembl_Plants	LTR	45301594	45301688	497	-	.	ID=13987	repeat_name=LTR_Gm_14_4511	repeat_type=LTRs	sequence=CGCAGCTGCGCAGTGGGCACAGAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCCCGCTGCAATAAGCAGCATACGCCTATTTT
8	Ensembl_Plants	rRNA	24390545	24390694	.	+	.	ID=gene:ENSRNA049459495	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGATGCGATCATACCAGCACTAAAGCACCGGATCCCATCAGAACTTCGAAGTTAAGCGTGCTTGGGCGAGAGAACTCCGAAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGTAAGTCCTTGTATTGCATTCC	8	Ensembl_Plants	LTR/Gypsy	24390613	24390667	256	+	.	ID=17337	repeat_name=LTR_Os_chr_07_1365	repeat_type=LTRs	sequence=GAGAACTCCGAAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACC
8	Ensembl_Plants	rRNA	24391296	24391414	.	+	.	ID=gene:ENSRNA049459484	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=CGATGCGATCATACCAGCACTAAAGCACCGGATCCCACCAGAACTCCGAAGTTAAGCGTGCTTGGGCGAGAGTTGTACTAGGATGGGTGACCTCCTAGGAAGTCCTCGTGTTGCATTCC	8	Ensembl_Plants	LTR/Gypsy	24391335	24391402	254	+	.	ID=17336	repeat_name=LTR_Os_chr_07_1365	repeat_type=LTRs	sequence=GAACTCCGAAGTTAAGCGTGCTTGGGCGAGAGTTGTACTAGGATGGGTGACCTCCTAGGAAGTCCTC
8	Ensembl_Plants	rRNA	24392030	24392148	.	+	.	ID=gene:ENSRNA049459462	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGATGCGATCATACCAGCACTAAAGCACCGGATCCCATCAGAACTCCGAAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGTTGGGTGACCTCCTGGGAAGTCCTCGTGTTCCAATCC	8	Ensembl_Plants	LTR/Gypsy	24392069	24392136	262	+	.	ID=17335	repeat_name=LTR_Os_chr_07_1365	repeat_type=LTRs	sequence=GAACTCCGAAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGTTGGGTGACCTCCTGGGAAGTCCTC
8	Ensembl_Plants	rRNA	24393509	24393627	.	+	.	ID=gene:ENSRNA049459451	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGATGCCATCATACCAGCACTAAAGCACCGGATCCCATCAGAACTCCGAAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTAGGAAGTCCACGTGTTGCATTCT	8	Ensembl_Plants	LTR/Gypsy	24393548	24393600	258	+	.	ID=17333	repeat_name=LTR_Os_chr_07_1365	repeat_type=LTRs	sequence=GAACTCCGAAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACC
8	Ensembl_Plants	rRNA	24393871	24393989	.	+	.	ID=gene:ENSRNA049459439	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGATGCGATCATACCAGCACTAAAGCACTGGATCCCATTAGAACTCCGAAGTTAAGCGTGCTTGGGCGAGAGTAGTACTATGATGGGTGACCTCTTGGGAAGTCCTCGTGTTGCATTCT	8	Ensembl_Plants	LTR/Gypsy	24393910	24393977	286	+	.	ID=17332	repeat_name=LTR_Os_chr_07_1365	repeat_type=LTRs	sequence=GAACTCCGAAGTTAAGCGTGCTTGGGCGAGAGTAGTACTATGATGGGTGACCTCTTGGGAAGTCCTC
8	Ensembl_Plants	rRNA	24389592	24389710	.	+	.	ID=gene:ENSRNA049459425	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGATGCGATCATACCAGCACTAAAGCACCGGATCCCATCAGAACTTCGAAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCATTCC	8	Ensembl_Plants	LTR/Gypsy	24389631	24389698	276	+	.	ID=17340	repeat_name=LTR_Os_chr_07_1365	repeat_type=LTRs	sequence=GAACTTCGAAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTC
8	Ensembl_Plants	rRNA	24390228	24390346	.	+	.	ID=gene:ENSRNA049459415	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGATGCGATCATACCAGCACTAAAGCACCGGATCCCATCAGAACTCCGAAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCATTCC	8	Ensembl_Plants	LTR/Gypsy	24390267	24390334	289	+	.	ID=17338	repeat_name=LTR_Os_chr_07_1365	repeat_type=LTRs	sequence=GAACTCCGAAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTC
8	Ensembl_Plants	rRNA	24389910	24390028	.	+	.	ID=gene:ENSRNA049459402	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGATGCGATCATACCAGCACTAAAGCACCGGATCCCATCAGAACTCCGAAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCATTCC	8	Ensembl_Plants	LTR/Gypsy	24389949	24390016	289	+	.	ID=17339	repeat_name=LTR_Os_chr_07_1365	repeat_type=LTRs	sequence=GAACTCCGAAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTC
scaffold_14	Ensembl_Plants	rRNA	61248	61363	.	-	.	ID=gene:ENSRNA049458337	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=TCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAATTTGGTGGTTAAACTCTACTGCGGTGACGATACTGTAGGGGAGGTCTGCGGCAAAATAGCTCGATGCCAGAA	scaffold_14	Ensembl_Plants	LTR/Gypsy	61168	61391	1719	+	.	ID=1309	repeat_name=sabrina_115G1-1	repeat_type=LTRs	sequence=ACCTTGCGTTTTGGATTTGGATCTTTTTCGTATTTCAAATAGTGAAAAAGTCAAATAAGAGGTGTTAAGCTTTTTATCATTCTGGCATCGAGCTATTTTGCCGCAGACCTCCCCTACAGTATCGTCACCGCAGTAGAGTTTAACCACCAAATTCGGGATGGATTGGTGTGGTTCCTCTACGCCTAGGACACCAGAATATCGAACCATGAACGAGAAAAGGCAT
scaffold_14	Ensembl_Plants	rRNA	43422	43538	.	+	.	ID=gene:ENSRNA049458292	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=TCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAATTTGGTGGTTAAACTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTGCGGCAAAATAGCTCGATGCCAGAA	scaffold_14	Ensembl_Plants	LTR/Gypsy	43394	43618	1815	-	.	ID=1310	repeat_name=sabrina_115G1-1	repeat_type=LTRs	sequence=GACCTTGCGTTTTGGATTTGGATCTTTTTCGTATTTCAAATAGTGAAAAAGTCAAATAAGAGGTGTTAAGCTTTTTATCATTCTGGCATCGAGCTATTTTGCCGCAGGACCTCCCCTACAGTATCGTCACCGCAGTAGAGTTTAACCACCAAATTCGGGATGGATTGGTGTGGTTCCTCTACGCCTAGGACACCAGAATATCGAACCATGAACGAGAAAAGGCA
8	Ensembl_Plants	rRNA	24394220	24394323	.	+	.	ID=gene:ENSRNA049459556	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGATGCGATCATACCAGCACTAAAGCACTGGATCCCATTAGAACTCCGATGTTAAGCGTGCTTGGGCGAGTAGTTTCCCCGATGGTACGCCGAAAACGTATTTG	8	Ensembl_Plants	LTR/Gypsy	24394286	24395043	2540	-	.	ID=22610	repeat_name=LTR_Os_chr_12_2212	repeat_type=LTRs	sequence=AAAACATCTCTGATCGGAATAGGGCTAGACCCTAAATAGGAAAGTGCGCTCATTGGTTTCATTCGGGCAAATAGAGACATTTTCGTGTGGAAACTGGCCGACATGCCAGGTGTGCCCAAGGAACTGATCGAGCACTCACTCAACATTGATCCTAAAGCTACTCCAAAAAAACAGTGACTACGAAGATTCGCCCAAGATAGAAGAGATGCAATTAAGAAGGAGCTAGCCAAATTACTTGCGGCAGGCTTCATAAAAGAAGTTTTCCACCCTGATTGGCTAGCCAACCCAGTTTTAGTTCGAAAGAAGAACAACAACGAGTGGAGGATGTGTGTCGACTACACAGACCTTAACAAACATTGCCCCAAAGATCCCTTTGGGCTTCCCAGAATCGACCAAGTAGTCGACTCCACAGCTGGAAGTGCACTACTTTGTTTCCTCAATTGTTACTCGGGATATCACCAGATAGCACTTAAGAAAGAAGACCAAGCCAAGACCGCGTTCATCACCCCTTTCGGAGCATTCTACTACAAGACAATGTCCTTTGGGCTGTAGAATGCAGGTGCAACATATCAACGCGTAATTCAAATGTGCTTTAAGAAACAACTACATCGCAACGTAGAAGCCTACGTGGACGATGTAGTAGTCAAAACCAGAAATCTACATGATCTGATCACAGACTTTCACAAGCCTGCGAGCATTCCGATGGAAACTCAATCCTACCAAATACGTTTTCGGCGTACCATCGGGGAAACTACTC
8	Ensembl_Plants	rRNA	24392388	24392537	.	+	.	ID=gene:ENSRNA049459506	Name=5S_rRNA	biotype=rRNA	description=5S ribosomal RNA	sequence=GGATGCGATCATACCAGCACTAAAGCACCGGATCCCATCAGAACTTCGAAGTTAAGCGTGCTTGGGCGAGAGAACTCCGAAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGTAAGTCCTTGTATTGCATTCC	8	Ensembl_Plants	LTR/Gypsy	24392456	24392510	256	+	.	ID=17334	repeat_name=LTR_Os_chr_07_1365	repeat_type=LTRs	sequence=GAGAACTCCGAAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACC
9	Ensembl_Plants	rRNA	40373654	40373806	.	-	.	ID=gene:ENSRNA049452647	Name=LSU_rRNA_eukarya	biotype=rRNA	description=Eukaryotic large subunit ribosomal RNA	sequence=GATTTTATACCCCCAAGAGTCCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTCTTCGCCACCTGGAGCTGTAGGTGGTTCCAAGGGTTGGGCTGTTCGCCCATTAATGCGGTACGTGAGCTGGGTTCAGAGACGTCAAGAGACAGTT	9	Ensembl_Plants	LTR	40373799	40374113	548	-	.	ID=129839	repeat_name=LTR_AC200497.1_12402	repeat_type=LTRs	sequence=TTTGCCGAGTGTCTGGACGGGGCACTCGGCAACCCACTTCTTTGCCGAGTGTCCGCGTCGGGCACTCGGCAAAGTACTAACGGCCGGCCTACTCCTCTAACGGACGGCGCATGTGCGAGCTACGTGCTGGAGATTTACCGAGTGTCAAATTGTTGCCGAGTGTCGTGTGGATGTTTGCCGAGTGTCTTATTTGAAACACTCGGCAAACCACAGCTTTGCCGAGTGTATTATTTATGCCGAGTGTCTTCCAGTATACACTCGGTAAAGGTTGTGTTTGTCGAGTGCCCGACAGAAAGCACTCGGCAAAGATTTTA
1	Ensembl_Plants	tRNA	30305962	30306043	.	+	.	ID=gene:ENSRNA049439261	Name=tRNA-Ser	biotype=tRNA	description=tRNA-Ser for anticodon AGA	sequence=GTGGTCGTGCCGGAGTGGTTATCGGGCATGACTAGAAATCATGTGGGCTTTGCCCGCGCAGGTTCGAATCCTGCCGACCACG	1	Ensembl_Plants	LTR	30305957	30306073	734	-	.	ID=35136	repeat_name=LTR_Al_scaffold_0001_223	repeat_type=LTRs	sequence=TAAAAAATTGAAAACAAATGAAAAAAAAGGCGTGGTCGGCAGGATTCGAACCTGCGCGGGCAAAGCCCACATGATTTCTAGTCATGCCCGATAACCACTCCGGCACGACCACTTTG
4	Ensembl_Plants	tRNA	40175426	40175497	.	+	.	ID=gene:ENSRNA049438754	Name=tRNA-Pro	biotype=tRNA	description=tRNA-Pro for anticodon UGG	sequence=GGGCGTTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGTCGCGAGTTCGATTCTCGCAACGCCCC	4	Ensembl_Plants	LTR	40175412	40175512	464	+	.	ID=43002	repeat_name=LTR_Gr_chr_12_2845	repeat_type=LTRs	sequence=AAAAAGTCAAAGAGGGCGTTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGTCGCGAGTTCGATTCTCGCAACGCCCCAATTTTTTTTTCATT
4	Ensembl_Plants	tRNA	40105532	40105604	.	+	.	ID=gene:ENSRNA049438741	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	4	Ensembl_Plants	LTR	40105532	40105649	724	-	.	ID=18166	repeat_name=LTR_Gm_18_6105	repeat_type=LTRs	sequence=TGCAAAAAAAAAGGAAAAATAAAAGGAAGAAAAAGGAAACAGAAATGGAGATGCGGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCC
4	Ensembl_Plants	tRNA	39695385	39695457	.	+	.	ID=gene:ENSRNA049438724	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	4	Ensembl_Plants	LTR	39695385	39695472	658	-	.	ID=43983	repeat_name=LTR_Mt_chr_02_162	repeat_type=LTRs	sequence=AAAAAAAGCCCATATTGGAGATGCGGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCC
4	Ensembl_Plants	tRNA	7487128	7487199	.	+	.	ID=gene:ENSRNA049438553	Name=tRNA-Asp	biotype=tRNA	description=tRNA-Asp for anticodon GUC	sequence=GTCGTTGTAGTATAGTGGTGAGTATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCCCCGGCAACGGCG	4	Ensembl_Plants	LTR	7487113	7487200	560	-	.	ID=1437	repeat_name=LTR_Sl_chr_05_995	repeat_type=LTRs	sequence=GCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATACTCACCACTATACTACAACGACCTGGTTGTTGATCG
4	Ensembl_Plants	tRNA	7487128	7487199	.	+	.	ID=gene:ENSRNA049438553	Name=tRNA-Asp	biotype=tRNA	description=tRNA-Asp for anticodon GUC	sequence=GTCGTTGTAGTATAGTGGTGAGTATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCCCCGGCAACGGCG	4	Ensembl_Plants	LTR/Gypsy	7487127	7487201	568	-	.	ID=28108	repeat_name=LTR_Gm_11_3659	repeat_type=LTRs	sequence=AGCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATACTCACCACTATACTACAACGAC
3	Ensembl_Plants	tRNA	3770102	3770175	.	-	.	ID=gene:ENSRNA049435248	Name=tRNA-Asn	biotype=tRNA	description=tRNA-Asn for anticodon GUU	sequence=GCTGGAATAGCTCAGTTGGCCAGAGCGTGTGGCTGTTAACCACAAGGTCGGAGGTTCGAGCCCTCCTTCTAGCG	3	Ensembl_Plants	LTR	3770098	3770175	617	+	.	ID=35605	repeat_name=LTR_Mt_chr_05_619	repeat_type=LTRs	sequence=AATCGCTAGAAGGAGGGCTCGAACCTCCGACCTTGTGGTTAACAGCCACACGCTCTGGCCAACTGAGCTATTCCAGC
3	Ensembl_Plants	tRNA	14240177	14240248	.	-	.	ID=gene:ENSRNA049435378	Name=tRNA-Asp	biotype=tRNA	description=tRNA-Asp for anticodon GUC	sequence=GTCGTTGTAGTATAGTGGTGAGTATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCCCCGGCAACGGCG	3	Ensembl_Plants	LTR/Gypsy	14240175	14240249	576	+	.	ID=28109	repeat_name=LTR_Gm_11_3659	repeat_type=LTRs	sequence=GCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATACTCACCACTATACTACAACGACC
3	Ensembl_Plants	tRNA	42853029	42853100	.	-	.	ID=gene:ENSRNA049435541	Name=tRNA-Pro	biotype=tRNA	description=tRNA-Pro for anticodon AGG	sequence=GGGCATTTGGTCTAGTGGTATGATTCTCGCTTAGGGTGCGAGAGGTCCCGAGTTCAATTCTCGGAATGCCCC	3	Ensembl_Plants	LTR	42853011	42853101	488	-	.	ID=43006	repeat_name=LTR_Gr_chr_12_2845	repeat_type=LTRs	sequence=AGGGCATTTGGTCTAGTGGTATGATTCTCGCTTAGGGTGCGAGAGGTCCCGAGTTCAATTCTCGGAATGCCCCAGTTTTTTAAAACTTTT
3	Ensembl_Plants	tRNA	50299867	50299939	.	+	.	ID=gene:ENSRNA049435642	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon UGC	sequence=GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGCACGGGGTTCGATCCCCCGCATCTCCA	3	Ensembl_Plants	LTR	50299867	50299952	570	-	.	ID=18180	repeat_name=LTR_Gm_18_6105	repeat_type=LTRs	sequence=AAGAAAAGACAGATGGAGATGCGGGGGATCGAACCCCGTGCCTCTCGCATGCAAAGCGAGCGCTCTACCATTTGAGCTACATCCC
3	Ensembl_Plants	tRNA	15525702	15525775	.	+	.	ID=gene:ENSRNA049440781	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA	3	Ensembl_Plants	LTR	15525684	15525791	596	-	.	ID=4368	repeat_name=LTR_Al_scaffold_0002_362	repeat_type=LTRs	sequence=AAAAATAAAAAAGCTTTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCCATTTTTTGTCATTGGAT
3	Ensembl_Plants	tRNA	1218630	1218702	.	+	.	ID=gene:ENSRNA049440616	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon CGC	sequence=GGGGGTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAGGCACGGGGTTCGATTCCCCGCACCTCCA	3	Ensembl_Plants	LTR	1218583	1218745	560	-	.	ID=18185	repeat_name=LTR_Gm_18_6105	repeat_type=LTRs	sequence=AGATAAAAAAGTCACTGCAAAGGATTGAAATGGCAATAAAAAATGGAGGTGCGGGGAATCGAACCCCGTGCCTCTCGCATGCGAAGCGAGCGCTCTACCATATGAGCTACACCCCCGTTGTGAAGGGGACGTAACTTGAAAATTATATCACCATTATTTATG
7	Ensembl_Plants	tRNA	24169852	24169925	.	-	.	ID=gene:ENSRNA049436499	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA	7	Ensembl_Plants	LTR	24169812	24169928	596	+	.	ID=4370	repeat_name=LTR_Al_scaffold_0002_362	repeat_type=LTRs	sequence=AAGTTCTGGAAAAAATTACTGAAGCAAAAAAAAAAATGATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCCATT
7	Ensembl_Plants	tRNA	24638657	24638730	.	-	.	ID=gene:ENSRNA049436488	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA	7	Ensembl_Plants	LTR	24638641	24638738	659	+	.	ID=4369	repeat_name=LTR_Al_scaffold_0002_362	repeat_type=LTRs	sequence=AAAATTTAAAAATATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCCATTTTATA
7	Ensembl_Plants	tRNA	29145949	29146020	.	-	.	ID=gene:ENSRNA049436450	Name=tRNA-Asp	biotype=tRNA	description=tRNA-Asp for anticodon GUC	sequence=GTCGTTGTAGTATAGTGGTGAGTATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCCCCGGCAACGGCG	7	Ensembl_Plants	LTR	29145943	29146032	623	+	.	ID=44444	repeat_name=LTR_Gr_chr_11_2758	repeat_type=LTRs	sequence=AATTGCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATACTCACCACTATACTACAACGACTTGGTTGTTTCA
7	Ensembl_Plants	tRNA	30139136	30139221	.	-	.	ID=gene:ENSRNA049436418	Name=tRNA-Tyr	biotype=tRNA	description=tRNA-Tyr for anticodon GUA	sequence=CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGTCGTTGCAGTGAAATCCTTAGGTCGCTGGTTCGAATCCGGCAGGTCGGA	7	Ensembl_Plants	LTR	30139086	30139224	646	+	.	ID=35135	repeat_name=LTR_Al_scaffold_0001_223	repeat_type=LTRs	sequence=CTGAATGTCACGAGCCCAAAAATAAAATGACGGAAAAGAAAAAATTAACTCCGACCTGCCGGATTCGAACCAGCGACCTAAGGATTTCACTGCAACGACTACAGTCCTCCGCTCTACCAACTGAGCTAAGGTCGGATT
7	Ensembl_Plants	tRNA	32697753	32697824	.	-	.	ID=gene:ENSRNA049436361	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon UUU	sequence=GCCGACCTAGCTCAGTGGTAGAGCGCGTGGCTTTTAACCACGTGGTCGTGGGTTCGATCCCCACGGTCGGCG	7	Ensembl_Plants	LTR	32697731	32697825	537	+	.	ID=35368	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=TCAAAATTAAAATAAAATAATCGCCGACCGTGGGGATCGAACCCACGACCACGTGGTTAAAAGCCACGCGCTCTACCACTGAGCTAGGTCGGCT
7	Ensembl_Plants	tRNA	35237339	35237411	.	-	.	ID=gene:ENSRNA049436274	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	7	Ensembl_Plants	LTR	35237302	35237451	719	+	.	ID=18184	repeat_name=LTR_Gm_18_6105	repeat_type=LTRs	sequence=CAACAAAAAGGAAGAAAAATTATAAAAAGGCACCGATGGAGATGCGGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCGGATGGAATTTCAGTCTTCATTTTTCTATAAGACATTTAT
7	Ensembl_Plants	tRNA	35837648	35837721	.	+	.	ID=gene:ENSRNA049436254	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGCTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA	7	Ensembl_Plants	LTR	35837639	35837736	609	-	.	ID=4367	repeat_name=LTR_Al_scaffold_0002_362	repeat_type=LTRs	sequence=GAAAAAAAAATTGATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATAGGCCGTTTCGAT
7	Ensembl_Plants	tRNA	25499194	25499266	.	+	.	ID=gene:ENSRNA049436113	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon UGC	sequence=GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGCACGGGGTTCGATCCCCCGCATCTCCA	7	Ensembl_Plants	LTR	25499194	25499282	596	-	.	ID=43995	repeat_name=LTR_Mt_chr_02_162	repeat_type=LTRs	sequence=GCAAAAAAAAAAACTCTGGAGATGCGGGGGATCGAACCCCGTGCCTCTCGCATGCAAAGCGAGCGCTCTACCATTTGAGCTACATCCC
7	Ensembl_Plants	tRNA	25470201	25470273	.	+	.	ID=gene:ENSRNA049436100	Name=tRNA-Phe	biotype=tRNA	description=tRNA-Phe for anticodon GAA	sequence=GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCA	7	Ensembl_Plants	LTR	25470191	25470306	722	+	.	ID=38142	repeat_name=LTR_Mt_chr_05_582	repeat_type=LTRs	sequence=CTTCACTTAGCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCATATTTTTCATGCTCTGATTTGTTATTCCTTTTT
7	Ensembl_Plants	tRNA	21189043	21189115	.	+	.	ID=gene:ENSRNA049436031	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon CGC	sequence=GGGGACGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAGGCACGGGGTTCGATTCCCCGCGTCTCCA	7	Ensembl_Plants	LTR	21189043	21189144	552	-	.	ID=43994	repeat_name=LTR_Mt_chr_02_162	repeat_type=LTRs	sequence=AGCGCAAAAAGAAAAATGTGCAACAATTATGGAGACGCGGGGAATCGAACCCCGTGCCTCTCGCATGCGAAGCGAGCGCTCTACCATATGAGCTACGTCCC
scaffold_14	Ensembl_Plants	tRNA	7091	7164	.	-	.	ID=gene:ENSRNA049435863	Name=tRNA-Trp	biotype=tRNA	description=tRNA-Trp for anticodon CCA	sequence=GCGCTCTTAGTTCAGTTTGGTAGAACGCGGGTCTCCAAAACCCGATGTCGTAGGTTCAAATCCTACAGAGCGTG	scaffold_14	Ensembl_Plants	LTR/Copia	7087	7526	1921	+	.	ID=3834	repeat_name=LTR_AC191345.3_7798	repeat_type=LTRs	sequence=AATCACGCTCTGTAGGATTTGAACCTACGACATCGGGTTTTGGAGACCCGCGTTCTACCAAACTGAACTAAGAGCGCTCTCAAAACAAAAAGCAAATCCTTTTCTACTCCTAACGTGTCTCACGTCCGTATAGTATCCACAAATTCAAGTTATACCCACTTTAATTGATCTCCCCACTACTGCCCATAAAGAAGAGAGAATTAATAGGTAGGGATGACAGGATTTGAACCTGTGACATTTTGTACCCAAAACAAACGCGCTACCAAGCTGCGCTACATCCCTTTTCCAAATTGTTCTACAAGGGGATTGTACATAATTCCTTTCTTGTTTTCCACATCGTAATTTTCTTCTATTTCTCTATCTATATAGAACTTTCTTGTCATTTCTTGTTTTTGGTCTCATATAATCAAGGAAGGGAAGGGTATACATCTAAAATCCA
scaffold_14	Ensembl_Plants	tRNA	128459	128531	.	-	.	ID=gene:ENSRNA049435806	Name=tRNA-Thr	biotype=tRNA	description=tRNA-Thr for anticodon UGU	sequence=GCCCACTTAGCTCAGAGGTTAGAGCATCGCATTTGTAATGCGAGGGTCATCGGTTCAAATCCGATAGTCGGCT	scaffold_14	Ensembl_Plants	LTR	114816	128706	108002	-	.	ID=36477	repeat_name=LTR_Os_chr_04_669	repeat_type=LTRs	sequence=ATCAAGCTAACTTTATCTTTATGAAATTCTAGTGTTTTTTTTACTAATTCTTTACTAATTCTAAGTAGAACTTCCAATTTCGAACTAGTTAATAACTAAGATTTATAATTAAGATCTGACATTTTAAGGATTCCCTATATATATTTCTATTTGTTACACTATTTCTGTTATGTAAGCCCACTTAGCTCAGAGGTTAGAGCATCGCATTTGTAATGCGAGGGTCATCGGTTCAAATCCGATAGTCGGCTTTTTTCTCTATCGATGTTCCATGAACAAGAATTTCTCTTTTCTCTAAATTAAATGGGGAATCGAGGGTCTATTATATCGTTCTACCTTACAATTTTGCTAGATACAAAGCATAAAAATAAATAATATATATACAAAAAATACGGATGTTGATGAAATTCGATTTTTTGTGGTACTTTTCGTAGATTTTACTCTGTTTATCCTTTAGTTTAATTCAGTTTGAATTTCGATGTATTCTGTAATGTAAATAGAATGAAATTTATTGTGTAAAAGAATTGATGAGCACTCCAAGAAATATCCTTATTTCTAGATTCATGTCTCCAGGATGATCCAAATACGCCGTCTGGGAGCTTTACCAGGACTCACTAGAAAAACGCCTAAATCCGGAAGTAATCAGAAAAAGAAATTCCATTCTGGGAAAAAAGAGCAATATCGTATTCGTCTTCAAGAAAAACAGAAATTGCGTTTTCATTATGGTCTGACAGAACGCCAATTACTAGATATGTACATATCGCTGGAAAAGCAAAAAGATCCACAGGTCAGTTTTACTACAATTACTTGAAATGCGTTTGGATAATATCCTTTTTCGATTGGGTATGGCTTCAACCATTCCTGGGGCCCGGCAATTAGTTAACCATAGACATATTTAGTTAATGGTCGTATAGTTGATATACCAAGTTTTCGTTGCAAACCCCGAGATATTATTACTACGAAGGATAACCAACGATCAAAACGTCTGGTTCAAAATTCTATTGCTTCATCCGATCCGGGCAAATTGCCAAAGCATTTGACGGTTGACACATTGCAATATAAAGGACTAGTAAAAAAAATTCTAGATAGGAAGTGGGTCGGTCTCAAAGTAAATGAGTTGTTAGTTGTAGAATATTACTCTCGCCAGACTTGAACTTAACGAAAAAAGGAAAGGTTCATAGAATTTTTTTCCCCTTCCCCTTTCCCCGAACTAAATCGACCTAAGGCTCTTAATTCGTATTTTCCCGTTCACCTAGCAGAAATAGATTAACCCTAGGTTCCTTTTTCTTTTTGTTATTTCCTCGATTTTCCATACCACAGTAATTGCTATAGAGAATTTCTATTAAATAAAGATATTATTGCTGGAATAAATTGTTATTTAATTTGATACATTGTGATTGCTAACATTGATGAATTAAGAGAAACGGAAAGAGAGGGATTCGAACCCTCGGTAAACAAAAGTCTACATAGCAGTTCCAATGCTACGCCTTGAACCGCTCGGCCATCTCTCCTCCATAATCTTATTATGGAAAATAAACTGAGTGAATAGCGAGTTTTCGTATTCCTGCAGTACAGGTACAGCCACAACGGCTGGGGGATTCCATGGCTCTATGGGAAAAATTCCTTTTCATCTAAGTGGAAGGATCCAGTATTTTTTTTTTACTAGGAATTCCGCTCCCTCGAAAAGTTTTTCTTTGGGGAAAACCAAAATAAAAAGAGAATGGAAGAATTCTTCTTATTCCATAAGAAAATAAAGGAACCCTAGAATTCTATTTGCATAAGGTACGTTACGCCATACAATCTAAATATAAAAAAGGGTATGGGGCAATTAATGACTTTGAAAACGCGAATAGCTGATGAGAGAAGTTGTTGTTTAGAAATAGGAAAGTGGAATGAAATCTAGTCTTAGTCAAATATTTCATATCTCTTCTTGTCCAAACAGAAGGAAAAGAAGACAATTTGAGCTGAGCGGAAAATCCATACCTCTCTTATCCATTTAGAGCATATGGATCGATTTATAAGAATCGAATGTTTTGTTTTTATGTTATTTTGTGATAGAATGAAAAGAATTCTATATAGAATGGGTTGGGAATTATGCCTAGATCCCGTATAAATGGAAATTTCATTGATAAGACCTCCTCGATGTAGCCAATATTTTATTGCAAATAATTCCGACAACCTCCGGGGAAAAAAGGGCATTTACTTATATAGAGATGGTGCGATTTGACTCGTTTTTTTTTAGCCCTACCTACATCTCATTCTTACGAGAAAGAGAGGGGGTTCGCATAGAGAGAACAAAATTAGTAAAGGAAACCCACGCTTGGGGAAGGTGAGGTGAACTAACAATTCCTTCTGTCGTGTATCCTCGATTGATGTGGCCTCAGATGCTTCAATTGTAGATTTGAGTATTGAGCGAAAGGTTACACCTACAGGATAGGCTCTGTATTACAGGCCAATCCGACTCTACTAGTACCAATAGGCAGCATAGGGGAGAAAAGCACTACACCTCGAAATAGGAATCAACAAGAGAAAAACTTTGTTAGAAATTAGCCCTTTCCTGATTGGTATCAGGTTGGGAAGAATGGTTAGGATAACAAACAACCATCAGTTTGTACTTTGGATACCCTTATAACCATCAAAGGTCGTTGAAGTGGCTAATTCCTCTAAATAGGAGGCGTTGAGAACAAAGAAATTCTTGGAGCTATCATTTTCCTCTAGCATTAATAGAATTCATTGGTGTTAAGAAAAACCTCTTGGGGGAAGGTTGGCTAGAGATTTCTTGGAAAAATACCAGCCCCCTTCGGTCCATAATGAGATGGAACTAATTCTATTTTTATTCTATAGATTTTTCGCTTAGTACTATGTACAGAAGGGAGAAGCCGTATGAGATGAAAACCTCATGTACGGTTTTGGAACGGAGATTTTTTGAATTGAATAGAATGAACGACCGTAACGGATGTTGGCTCAATCCGAAGGAAATTATGCGGAAGCTTTGCAGAATTATTATGAAGCTACGCGACTAGAAATTGATCCCTATGATCGAAGTTATATACTATATAACATAGGCCTTATACACACAAGCAATGGAGAGCATACAAAGGCTTTGGAATATTATTTCCGGGCGCTAGAACGAAACCCCTTCTTACCGCAAGCTTTTAATAATATGGCCGTGATCTGTCATTACGTGCGACTATCTCCACTATAGAAAGAAGAAAAAAAAAAGGAGAAAATTTTCTAGTAAATACTAGAAAAAAGGGCTTTCTACATAGGGATCGTCAAAACAACGATTTTACCCTATCAGCTGTAGGAAGGAAAGACACTTCACGAGAATCAAAATAGGAAGAAAGTAGAGCCTATACTACTATTCTATGGATAAAGCTGAAATTGATAGAGAAAACACCGTAAAGATCAATTAGTGAGCGACTGGGTCGATACAACTAAAAAAAAAACTGCTTCATTATACCACAATATGGGACAAAATTTAGGAATCCGCTTATGTAATAAAGCCGATCCACTAAGGGATTAAGCAGCGGTGTAGTATCAGATCCCAAAGATAGTAAGTTCTTTTTTCTTTGTTATGGGAAAAAGTCTTTTTCGAGGATTCTATAGAAATTTCATATATGAAAGAAACGAAACCGAGATAGTTACCTTTCAGAAAATTGGAACGAAGGATATAGGTCTATCTATGCTTCATTCTTCTGAAGGTGGGAGAAAAGATCAAACTGATTATTGATCAAAATTAGGGTTGAAACTTAGGTAATTAACTTCTTCTGCTTAACCCAAGAAGAAATTGGATTGATTTTTGAGAAATCGAATTCAGTTAATATAGGGGAAATTAAGATAGCAATTTCTGAGCCGTATGAGGTAGGAAACTCTCAAGTACGGTTCTAGGGGAAGGAACTGCCTATTCCGACCGAGGAGAACAGGCCATTCTACAGGGCGATTCGGAAATTGCGGAAGCTTGGTTTGATCAAGCTGCTGAGTATTGGAAACAAGCTATAGCGCTTACTCCGGGAAATTATATTGAAGCACAGAACTGGTTGAAGATTACGAAGCGCTTTGAATTTGAATAAAACAACTCTCCATTTCCATAAAATGGGTGGTTTGGTTGTTGATCCATTAATCAAATAATTTAGGTAAGAAGATCAAATCAAGAATTTCATTATATCCCTTTCTTCTACCTTCGATTTTATATCATATTTCATAAAGATAAATAATAGGGATAGGCTCTGGAACAGAAGTAATAAAGCACATAAAAGGTGGCAATCTAAATATTCCTACCTAATCTATCAGACGGTCTTATTAATAATTCTAATGAGTTATCTTGGAATTTGGAATCGCATAAAAAAATCTATATATGCTCACTCAAGGAAAGTAGATGTGGATAGGGGCTTATACCCTCAAAAAAAAATACACTAGCTTCTTAAATTAAAACGTAAAAAAAAAAAAAGATTTTTTTTGTTACGTCGGGAAATAATTTTCCAGAAGAACCCATGTCCGTTAGGCACCTAATCCTTATGTCATAATAGATCCGAACACTTGCCTCGGATTGACTTCAATATATAATTGCTCCAGTGAATAACTAAAAAAAATAGAAGGACGGTAGATAGTAAAGAAAAGGACTAATCATAATATCTATCTTTCAAAGATTCAATAAAAAGACAGTTGGCGGGTCTCTTTGTATGTCTTGTCCGGAAAGAGGAGGACTTAATGATTATTCGTTCGCCGGAACCAGAAGTTAAAATTGTTGTGGATAGGGATCCTGTAAAAACATCTTTTGAGGAATGGGCCAGACCCGGGCATTTCTCAAGAACAATAGCTAAGGGTCCCGATACTACCACTTGGATCTGGAACCTACATGCTGATGCTCACGATTTCGATAGTCATACCGGTGATTTGGAGGAGATCTCCCGAAAAGTCTTTAGTGCTCATTTCGGTCAACTCTCCATTATCTTTCTTTGGTTGAGTGGGATGTACTTCCACGGTGCCCGTTTTTCCAATTATGAAGCATGGCTAAGCGATCCTACTCACATTGGCCCCAGTGCTCAGGTAGTTTGGCCAATAGTAGGGCAAGAAATTTTGAATGGTGATGTAGGCGGGGGTTTCCGAGGAATCCAAATAACCTCTGGGTTTTTTCAGATTTGGCGAGCATCCGGAATAACTAGTGAATTACAACTCTATTGTACCGCATCGGTGCATTGATTTTTGCATCGTTAATGCTTTTTGCTGGTTGGTTCCATTATCACAAAGCTGCTCCCAAATTGGCCTGGTTCCAAGATGTAGAATCCATGTTGAATCACCACTAGCGGGGTTATTAGGACTTGGGTCTCTTTCTTGGGCGGGACACCAAATCCATGTATCTTTACCGATTAACCAATTTCTCGACGCTGGGGTTGATCCTAAAGAGATACCACTTCCTCATGAATTTATCTTGAATCGCGACCTTTTGGCTCAACTTTATCCTAGTTTTGCCGAAGGAGCAACTCCCTTTTTCACCTTGAATTGGTCCAAATATGCAGAATTTCTTAGTTTTCGCGGAGGACTAGATCCAATAACCGGTGGTCTATGGTTGAGCGATATTGCACACCATCATTTAGCTATGCTATTCTTTTCCTGATCGCTGGTCATATGTATAGGACCAACTGGGGTATTGGTCATGGACTTAAAGATATTTTGGAGGCTCATAAGGGCCCATTTACAGGACAAGGCCATAAGGGTCTCTATGAAATCCTAACAACGTCATGGCATGCTCAATTATCTCTTAACCTAGCTATGCTAGGCTCTACAACTATTGTTGTAGCTCATCATATGTACTCTATGCCCCCCTATCCATACCTAGCTACCGACTATGGTACACAACTTTCCTTGTTCACACACCACATGTGGATTGGCGGATTTCTAATAGTCGGTGCTGCTGCACATGCAGCCATTTTTATGGTAAGAGACTATGATCCAACTACTCGATACAACGATCTATTAGATCGCGTCCTTAGACACCGCGATGCAATCATATCCCACCTTAACTGGGTATGTATATTTCTGGGTTTTCACAGTTTTGGCTTGTACATTCATAATGATACCATGAGTGCTTTAGGCCGTCCCCAGATATGTTTTCGGATACCGCCATACAATTACAACCCATCTTTGCTCAATGGATACAAAATATCCATGCTGGCGCGCCTGGCGTAACAGCTCCTGGTGCAACAACAAGTACCAGCTTAACGTGGGGAGGCAGCGAGTTAGTAGCTGTAGGCGGCAAAGTGGCTTTGTTACCTATTCCATTAGGAACCGCAGATTTTTTAGTCCATCACATTCACGCATTTCTATCCATGTGACTGTATTAATACTTTTGAAAGGTGTTTTATTTGCTCGCAGTTCCCGTCTGATACCTGATAAAGCAAATCTTGGCTTTCGCTTCCCTTGCGACGGGCCTGGGCGAGGGGGAACATGTCAAGTATCCGCCTGGGATCATGTTTTCTTAGGTCTATTCTGGATGTATAATTCCATTTCGGTAGTTATTTTCCATTTCAGTTGGAAAATGCAGTCGGATGTTTGGGGTACTATAAGTGATCAAGGGATAGTAACTCATATCACAGGGGGAAACTTTGCACAGAGTTCCATTACGATTAATGGTTGGCTTCGAGATTTCTTGTGGGCACAGGCATCCCAAGTAATTCAGTCTTATGGTTCTTCATTATCCGCATATGGTCTTTTTTTCTTAGGCGCTCATTTTGTCTGGGCTTTCAGTTTAATGTTTTTATTCAGCGGCCGTGGTTATTGGCAAGAACTCATTGAATCTATCGTTTGGGCTCACAACAAATTAAAAGTTGCTCCTGCTACTCAGCCTAGAGCCTTGAGCATTATACAAGGACGTGCTGTAGGAGTAACCCATTACCTTCTGGGTGGAATTGCCACAACATGGGCATTCTTCTTAGCGAGAATTATTGCAGTAGGATAGTGGCTAGGAGGATTTGAAAGGCATTATGGAATTAAGATTTCCCAGGTTTAGCCAAGGCTTAGCTCAGGACCCCACTACTCGTCGTATTTGGTTTGGTATTGCTACCGCACATGATTTCGAAAGTCATGATGATATTACTGAGGAACGTCTTTATCAGAACATTTTTGCTTCTCACTTTGGGCAGTTAGCAATAATCTTTCTATGGACGTCTGGAAATCTGTTTCATGTAGCTGGCAAGGAAATTTTGAATCATGGATACAGGATCCTTTACACGTAAGACCTATTGCTCATGCCATTTGGGATCCTCATTTTGGGCAACCCGCGGTGGAAGCCTTTACTCGAGGAGGTGCTGCCGGTCCAGTGAATATTGCTTATTCTGGGGTTTATCAGTGGTGGTATACAATTGGATTGCGCACCAATGAAGATCTTTATACTGGAGCTCTTTTTCTATTATTTCTTTCTACGCTATCCTTAATAGGGGGTTGGTTACATCTACAACCCAAATGGAAGCCAAGCCTTTCGTGGTTCAAAAATGCGGAATCTCGTCTCAATCATCATTTGTCAGACTTTTCGGGGTAAGTTCTTTGGCTTGGACAGGACATTTAGTTCATGTTGCTATTCCCGCATCCAGGGGGGAGTACGTTCGATGGAATAATTTCTTAGATGTATTACCCTATCCCCAGGGGTTGGGTCCCCTTCTGACGGGTCAGTGGAATCTTTATGCCCAAAATCCTGATTCGAGTAATCATTTATTTGGTACCACTCAAGGAGCGGGAACTGCCATTCTGACCCTTCTTGGGGGATTCCATCCACAAACACAAAGTTTGTGGCTGACCGATATTGCTCATCATCATTTAGCTATTGCATTTATTTTTCTCATTGCCGGTCATATGTATCGAACTAACTTCGGAATTGGGCACAGTATCAAAGATCTTTAGAAGCACATACTCCTCCGGGGGGTCGATTAGGACGTGGGCATAAAGGCCTTATGATACAATTAATAATTCGATTCATTTTCAATTAGGTCTTGCTCTAGCTTCCTTAGGGGTTATTACTTCCTTAGTAGCTCAACATATGTACTCTTTACCTGCTTATGCATTCATAGCACAAGACTTTACTACTCAAGCTGCTTTATATACTCATCACCAATACATTGCAGGGTTCATCATGACAGGGGCTTTTGCTCATGGAGCTATTTTTTTCATTAGGGATTACAATCCGGAACAGAATGAAGATAATGTATTGGCAAGAATGTTAGACCATAAAGAAGCTATCATATCTCATTTAAGTTGGGCTAGCCTCTTCCTAGGATTCCATACCTTAGGCCTTTATGTTCATAACGACGTCATGCTTGCTTTTGGTACTCCAGAAAAGCAAATCTTGATCGAACCTATATTTGCCCAATGGATACAATCTGCTCATGGTAAGACGACATATGGGTTCGATATACTCTTATCTTCAACGAATGGCCCCGCTTTCAATGCAGTCGAAGCATATGGTTGCCCGGATGGTTGAATGCTGTTAATGAGAATAGTAATTCGCTTTTCTTAACAATAGGACCCGGAGATTTCTTGGTTCATCATGCTATTGCTCTAGGTTTGCATACAACTACATTGATTTTAGTAAAGGGTGCTTAGATGCACGCGGTTCCAAATTAATGCCGGATAAAAAGGATTTCGGATATAGTTTTCCTTGCGACGGCCCAGGGCGCGGTGGTACTTGTGATATTTCTGCTTGGGACGCGTTTTATTTGGCAGTTTCTGGATGTTAAATACCATTGGATGGGTTACTTTTTATTGGCATTGGAAACACATCACATTATGGCAGGGCAACGTTTCACAATTTAATGAATCCTCCACTTATTTGATGGGATGGTTAAGAGATTACCTATGGTTAAACTCTTCACAACTTATCAATGGATATAATCCTTTTGGGATGAATAGTTTATCAGTATGGGCTTGGATGTTCTTATTTGGACATCTTGTTTGGGCTACTGGATTTATGTTCTTAATTTCCTGGCGTGGATATTGGCAGGAATTAATTGAGACTTTAGCATGGGCCCATGAACGCACACCTTTGGCTAATTTAATTCGCTGGAGAGATAAGCCCGTGGCTCTTCCATTGTGCAAGCAAGATTGGTTGGATTAGCCCACTTTTCCGTGGGTTATATATTCACTTATGCAGCTTTCTTGATTGCCTCAACATCAGGCAAGTTTGGTTAATTTAGTTATTTTTTTTTTGTTTTTTTGTACTGTATCAGAACCTAGTTCATTACTCTTGATGGAGAGGGAGGATCCGCCTTTTTAGATTTTTTTTCTATTTATTTTTCCATCTAGGATTAGAACCATATACTTGGTAATAATAGGAACGGCACATTATGGCAAAAAAAAGTTGATTCAGAGGGAGAAGAAGCGGCAGAAATTAGAAAAAAAATATCATTTGATTCGTGGATCCTCAAAAAAAAAGATAAGAAGCAAAGTTTCCCCTTTGAGTTTGAGCGAAAAAAAAAAAATGCAAGAAAAATTGCAATCCCTACCACGTAATAGTGCACCTACACGCCTTCATCGACGTTGTTTTTTAACCGGAAGACCTAGAGCTAACTATCGAGACTTTGGGCTATCCGGACACATACTTCGAGAAATGGTTTATGCATGTTTGTTACCGGGTGCAACAAGATCCAGTTGGTAAGGATAAAATACCCTTTCATATTTGTATGGTTTTCTCGAATTGATGATCGTAGAAGAGCCCTCTTTACCATTCTGTATAAATGGACTATTCTATTTATATAGATATGGTAGAGGGGCGTATCCAATCCCCTTTTATCCACAAGTTCCCCGCTCTTTAGTTTAAGAAGGTAGAGCAGTTTGGTAGCTCACAAAGCTCATAACCTTGGGGTTACGGGTTCGATACTCACTACCCGCTCCATATTCCTTCTTTATGATATATGTATCATCCATTTGTATATGGTATATGGATTTTTTTTCTTTCCTAAAAGAGTTTCGGTCTAACAGTTTTTTATTTTTTCTCTTGTTCCGAGAAAAAAGTAAAAGAAAGAAAAAAATACGAAAGAAAAGCGTCCATTGTCTAATGGATAGGACAGAGGTCTTCTAAACCTTTGGTATAGGTTCAAATCCTATTGGACGCAATCTTTTTTCTATCTATTCTTTAAATAACTATACTAAATACTAAGAAAACTTTTTTGCATGATTCAAATGAAAAATCTTTCTCAATGATTCCTCTTCTACTAACACGAGTTCTACTAATAAGAGTAGACATGCTATATTTATGTTTGTTCCTGAAGGGAAAACCGTTCAAGCTGTTCCTGAATAGCTTCCTTCAAAAGGGTTTCTGCTTGCTCGGTGAATGTCTTGCTAGAAGATATAATTTCTTGGAATTGAGGTTTAGTATCTTTAGGTGTTTACGTAACTCATCCAGAAATTTCTTTACCTGTTCATTTCTAACGAATCAAGATATCCTCTCGTTCCGGTATAAATGGTAGCTACTTGCTCTTCCACTGGGAGAGGGTTTGATTGGGATTGTTTAAGCAATTCCCGTAATCGTCGACCCCTTGCCAATTGATTCTGACTTGTTTTATCGAGAGCAGAGGCGAATTGTGCAAAGGCTTGTAACTCCGCGAATTGAGCTAATTCCAATTTTGATTTGCCAGCTACTTGTTTCATGGCTTTAATTGAGCTGCGGATCCTACTCTGGAAACAGAAATACCCACATTAATAGCAGGTCGAATTCCGGCATTGAATAGATCCGCGGATAAGAATATTTGTCCATCTGTAATTGAGATTACATTAGTAGGAATATAGGCGGAAACGTCTCCAGATTGAGTCTCCACTATTGGTAAAGCGGTCATACTCCCTTCGCCTAAAAGAGAATTTAATTTAGCGGCTCTTTCTAAAAGGCGTGAATGCAAATAAAAAACATCCCCTGGATAAGCTTCGCGGCCGGGGGGTCTTCTTAATAGAAGGGACATTTGGCGATAAGCTTGTGCCTGTTTGGAGAGATCATCATAAATTATTAAAGTATGCCGTTCGCGGTACATAAAATACTCAGCCAGGGCTGCTCCCGTATAAGGAGCGAGATATTGTAATGTAGCGGGTGAATCCGCCATTCAGCTACTACAATAGTGTATTCCATGGCCCCCTCTTCGTGGAAAGTAGTTACTACTTGAGCCACGGAGGATGCTCTTTGACCGATAGCTACATAAACACATATTACATCTTGCCCTTTTTGATTGAGAATTGTATCTGTGGCTACTGCTGTTTTGCCAGTCTGTCTGTCCCCAATAATTAACTCTCGCTGACCGCGCCCTATGGGGATCATCGAATCGATAGCAATAAGCCCTGTTTGAAGGGGTTCATATACGGAACGCCTAGAAATTATACCCGGAGCAGGAGATTCAATTAAGCGAGATTCCGAAGCGACAATTTCGCCTCTCCCATCAATAGGTTTAGCGAGAGCATTTATAACACGACCCAAGTAAGCCTCGCTCACGGGTATCTGAGCAATTCTTCCTGTTGCTTTTACAAAACTTCCCTCTTGTATCATCAACCCATCGCCCATTAATACAATTCCAACATTTTTGGATTCCAAATTCAGAGCAATACCTCTCGTCCCTTCCGCAAATTCGACTAATTCACCTGACATTATTTCACCAAGACCTATAATACGAGCAATCCCATCCCCCACTTGAACTACGCGACCGATATTCTCAATCCCTACTTTCCTATTATATTGTTCAATACGTTCGCGGAGAATTTTATTAATTTCGTCGACTCGAAGGGTTGCCATTAGTGTTTCTTGAATCTTTTTTTTTTTCGGAAGCAAGGGGAAAAATAATGCCTAAATTCTAAACGAAAGTAGAAGTTCAAAACCTAATAAATTTCATTATCTCTTCCATTCTATGGCCCCGAGAATGCCAATATTAGCACGAATCGTACGGAAATGTAACTCGGTATTCAAACAACTATTCAGAGTTCCTAGAGCTCCTTGTACGGCTTGTTGGAAAACCCGTTGTCGAACCTGATTCATCGCCCTTTGTTTTTCAAATAAAGGGTTTCGTTTTTAGACTTTTCTAATTGTTCCAAACTAATAGAAGTAGCATTAATCAAATTTGCTTTTTCTCGTTCTATTTCAGAGTATCCATTCATTCGATACTCATCTGCTTCTAGTTCGACTTTCTGTAATCGAATCCGAGCTTTTTCGAGTTGTTCAAGGGTCCCTCTACGCAATTCTTCCGAATTTCGAATAGTACTTAAGATCCTCTGTTTTCGATTATCTAATAAATCTTTTAATGAAAGTAGATTATCTTGCTATTAAGTTTACAATTTTTATGATCTCTTCCCGAACCAAACATGAATCTTTCGATTCATTTGGCTCTCCCGCTCCTTTTTTTCTCTTTTGCTATGTATTTTTTTCTCTTTGCTATGTATTATGGCTATTTCCATATCTTTTTTTTATGTAATGAGCCTATCCTCTCTTTCTGTTTGTATTTCTATATACCCAAACTTATATAAGACTAGATGAATATTAAGATAAGAGGATTCTTCCAACTAGATAAAAATCTATCATGGTCAGCAAAGTTGTTTCTTTATTTGTGTTTGCTCTGTTAGTTAATAATTTCAATTTCATTAAGAAAAACAAACTAAATAAATGGAAAATCTAAATTGATACAATTCCTTTTATTTTTTCTTCAAATCCAAAAAATTTCTCTTTTATACATAGGTCGTCGATTCGGCATTGGAAAAAGGGCTGGATGCCCTTCTAGTAAATAGTTCAAACTATTTTATCGATATGAGTGTTCTATATCAGATAAATTCCACACTAGCTATTCCCGTTTAAAGCATTTCGAGACTAATGTAGTTGTAGAAAGAGTACCCCTTTTGCCCGGACTTCAAGCAGTTTAGCTTTAACCGTGTTAATGGTCTCACATTATTGGTCTATAGAGAATCAAAGTAAATTTACCAATGAGTCGCGAAATGCTATGGTTCTTCCATATGATTTCTGAAGTTATTCAGAAGTAATTCGTCGAGATCGTGCACCTTTTCTTATTTATCCAAAAAAATACTAAAAAATATTCTAAAGTGCAGCCGGATAGATCCAATCTATTCTTGAAATAGACAACTCGCACACACTCCCTTTCCAAAAAAAATCAATACACCAACCACTACAGTTAGATTTATTAGATTTGTTGCTAAAATATCGGTATTAAGCCCGAAACTCCCAGCGAATGGCCTGTGAGCTAAAAAAACGAAAGAATAGGTTACATTTTTCATATGCTCTCCTCTATAGATAGGACGAACAAAGAAGAAAGTTTTTCGATCACTTACTTCGCTCGCCCTTTTTTGATCGGTTTTTTTAATGCAATCTTTTTTTAATGCAAATAGATTTAATCTAATAATTTCTTTTAGATTAAGTCTTAGGTCTTGTTTGACCTGTAAAAAATCTCCTTTGTTGAAATGTTCCCAAAATTCCTAAAATAAAAGAAAAAGAGTTTCCACTGTCCTAAACTAAGAATGGGAAGGAAGAGGACGAGCGTATCCTCTAAATTGATCATGCTCAAATCAGCCCTTCCTGGGGTTCCTGGGGTATTGTCTGTCCCGATAAATACAAAATTCCCGGAATAATATAATAAATAGGAGTAAAGTATTGATATACTTGGAATTACAGAAGCAAATCCCAATGTACGAAAAAAAAGAAAAAAGTATCTAATCTAAAGGACTCTTTTTCTTTTTTAGGATTAAACAAAAGGGTTCGCAAATAAAAGCGCTAGTGCCACAACCAGTCCATAAATTGTTAAAGCTTCCATAAAAGCTAGACTAAGCAATAAAGTACCTCGTATTTTACCTTCTGCTTCTGGCTGTCTCGCAATACCTTCTACAGCTTGTCCTGCAGCAGTACCTTGACCAACTCCGGGCCCAATA
5	Ensembl_Plants	tRNA	37518753	37518838	.	-	.	ID=gene:ENSRNA049440491	Name=tRNA-Tyr	biotype=tRNA	description=tRNA-Tyr for anticodon GUA	sequence=CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGTGTCTGCAGATGAATCCTTAGGTCGCTGGTTCGAATCCGGCAGGTCGGA	5	Ensembl_Plants	LTR	37518746	37518840	629	+	.	ID=35131	repeat_name=LTR_Al_scaffold_0001_223	repeat_type=LTRs	sequence=AAAATATCCGACCTGCCGGATTCGAACCAGCGACCTAAGGATTCATCTGCAGACACTACAGTCCTCCGCTCTACCAACTGAGCTAAGGTCGGAT
5	Ensembl_Plants	tRNA	38669603	38669674	.	-	.	ID=gene:ENSRNA049440480	Name=tRNA-Asp	biotype=tRNA	description=tRNA-Asp for anticodon GUC	sequence=GTCGTTGTAGTATAGTGGTGAGTATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCCCCGGCAACGGCG	5	Ensembl_Plants	LTR	38669597	38669675	590	+	.	ID=44443	repeat_name=LTR_Gr_chr_11_2758	repeat_type=LTRs	sequence=AATTGCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATACTCACCACTATACTACAACGACT
5	Ensembl_Plants	tRNA	45408129	45408201	.	-	.	ID=gene:ENSRNA049440366	Name=tRNA-Phe	biotype=tRNA	description=tRNA-Phe for anticodon GAA	sequence=GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCA	5	Ensembl_Plants	LTR	45408100	45408205	754	-	.	ID=38140	repeat_name=LTR_Mt_chr_05_582	repeat_type=LTRs	sequence=AATAGCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCACTTGATTTTTTTTTAACTTTTAATTTCA
5	Ensembl_Plants	tRNA	46775091	46775163	.	-	.	ID=gene:ENSRNA049440336	Name=tRNA-Phe	biotype=tRNA	description=tRNA-Phe for anticodon GAA	sequence=GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCA	5	Ensembl_Plants	LTR	46775064	46775164	767	-	.	ID=38139	repeat_name=LTR_Mt_chr_05_582	repeat_type=LTRs	sequence=AGCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCATTTTTGTTATGTTTTTTTTGTTCTTC
5	Ensembl_Plants	tRNA	46757156	46757228	.	+	.	ID=gene:ENSRNA049440274	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon UGC	sequence=GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGCACGGGGTTCGATCCCCCGCATCTCCA	5	Ensembl_Plants	LTR	46757152	46757271	577	-	.	ID=18165	repeat_name=LTR_Gm_18_6105	repeat_type=LTRs	sequence=GCAAAAAAAAAAAACGAAAAAACAAAACAAACAAAATACGTAGTGGAGATGCGGGGGATCGAACCCCGTGCCTCTCGCATGCAAAGCGAGCGCTCTACCATTTGAGCTACATCCCCAAT
5	Ensembl_Plants	tRNA	45429382	45429453	.	+	.	ID=gene:ENSRNA049440249	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon UUU	sequence=GCCGTCCTAGCTCAGTGGTAGAGCGTGTGGCTTTTAACCACGTGGTCGTGGGTTCGATCCCCACGGACGGCG	5	Ensembl_Plants	LTR	45429381	45429453	535	-	.	ID=35365	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=CGCCGTCCGTGGGGATCGAACCCACGACCACGTGGTTAAAAGCCACACGCTCTACCACTGAGCTAGGACGGC
5	Ensembl_Plants	tRNA	41102641	41102713	.	+	.	ID=gene:ENSRNA049440183	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon CUU	sequence=GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAACCCCACGGTGGGCG	5	Ensembl_Plants	LTR	41102638	41102713	584	+	.	ID=19676	repeat_name=LTR_AC183412.5_672	repeat_type=LTRs	sequence=AAGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAACCCCACGGTGGGCG
5	Ensembl_Plants	tRNA	36611636	36611708	.	+	.	ID=gene:ENSRNA049440104	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon CUU	sequence=GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCG	5	Ensembl_Plants	LTR	36611634	36611708	608	+	.	ID=19677	repeat_name=LTR_AC183412.5_672	repeat_type=LTRs	sequence=AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCG
5	Ensembl_Plants	tRNA	10224646	10224717	.	+	.	ID=gene:ENSRNA049439934	Name=tRNA-Pro	biotype=tRNA	description=tRNA-Pro for anticodon AGG	sequence=GGGCATTTGGTCTAGTGGTATGATTCTCGCTTAGGGTGCGAGAGGTCCCGAGTTCAATTCTCGGAATGCCCC	5	Ensembl_Plants	LTR	10224643	10224727	478	+	.	ID=43004	repeat_name=LTR_Gr_chr_12_2845	repeat_type=LTRs	sequence=CAGGGCATTTGGTCTAGTGGTATGATTCTCGCTTAGGGTGCGAGAGGTCCCGAGTTCAATTCTCGGAATGCCCCAATTTTTGAT
5	Ensembl_Plants	tRNA	8337367	8337438	.	+	.	ID=gene:ENSRNA049439907	Name=tRNA-Asp	biotype=tRNA	description=tRNA-Asp for anticodon GUC	sequence=GTCGTTGTAGTATAGTGGTGAGTATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCCCCGGCAACGGCG	5	Ensembl_Plants	LTR	8337338	8337438	597	-	.	ID=1436	repeat_name=LTR_Sl_chr_05_995	repeat_type=LTRs	sequence=CGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATACTCACCACTATACTACAACGACCTTGTTGATGTTCGTATCATAGTTACAT
2	Ensembl_Plants	tRNA	1075609	1075680	.	-	.	ID=gene:ENSRNA049438433	Name=tRNA-Asp	biotype=tRNA	description=tRNA-Asp for anticodon GUC	sequence=GTCGTTGTAGTATAGTGGTGAGTATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCCCCGGCAACGGCG	2	Ensembl_Plants	LTR	1075609	1075681	569	+	.	ID=44446	repeat_name=LTR_Gr_chr_11_2758	repeat_type=LTRs	sequence=GCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATACTCACCACTATACTACAACGACT
2	Ensembl_Plants	tRNA	27801797	27801869	.	-	.	ID=gene:ENSRNA049438268	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon CUU	sequence=GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCG	2	Ensembl_Plants	LTR	27801726	27801875	564	+	.	ID=19675	repeat_name=Zm_AC145262.7_1L	repeat_type=LTRs	sequence=ACAAAGAGGCGTAACAAAATAACAAAAAAAATAAATAAAAATAAAGTGCATACAAAAAGAAACATCTAAACGCCCACCGTGGGGCTCGAACCCACGACCACAAGGTTAAGAGCCTTGCGCTCTACCGACTGAGCTAGACGGGCTTGTTG
2	Ensembl_Plants	tRNA	27801797	27801869	.	-	.	ID=gene:ENSRNA049438268	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon CUU	sequence=GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCG	2	Ensembl_Plants	LTR	27801787	27801881	639	-	.	ID=19683	repeat_name=LTR_AC183412.5_672	repeat_type=LTRs	sequence=TACCACCAACAAGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCGTTTAGATGT
2	Ensembl_Plants	tRNA	34551033	34551118	.	-	.	ID=gene:ENSRNA049438245	Name=tRNA-Tyr	biotype=tRNA	description=tRNA-Tyr for anticodon GUA	sequence=CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGTCGTCGCAGATAAATCCTTAGGTCGCTGGTTCGAATCCGGCAGGTCGGA	2	Ensembl_Plants	LTR	34551018	34551129	648	+	.	ID=35143	repeat_name=LTR_Al_scaffold_0001_223	repeat_type=LTRs	sequence=AAAACAAAAAATAATCCGACCTGCCGGATTCGAACCAGCGACCTAAGGATTTATCTGCGACGACTACAGTCCTCCGCTCTACCAACTGAGCTAAGGTCGGTTTTGTGTGGT
2	Ensembl_Plants	tRNA	36926920	36926993	.	-	.	ID=gene:ENSRNA049438220	Name=tRNA-Asn	biotype=tRNA	description=tRNA-Asn for anticodon GUU	sequence=GCTGGAGTAGCTCAGTTGGTTAGAGCGTGTGGCTGTTAACCACAAGGTCGAAGGTTCAAGCCCTTCCTCTAGCG	2	Ensembl_Plants	LTR	36926902	36926993	622	+	.	ID=35609	repeat_name=LTR_Mt_chr_05_619	repeat_type=LTRs	sequence=AAAAAAAAACTAAAAAACGCTAGAGGAAGGGCTTGAACCTTCGACCTTGTGGTTAACAGCCACACGCTCTAACCAACTGAGCTACTCCAGC
2	Ensembl_Plants	tRNA	37202109	37202180	.	-	.	ID=gene:ENSRNA049438207	Name=tRNA-Thr	biotype=tRNA	description=tRNA-Thr for anticodon UGU	sequence=GCCCCTATAGCTCAGTGGTAGAGCGTCAGTCTTGTAAACTGAAGGTCCGTAGTTCGATCCTGCGTGGGGGCA	2	Ensembl_Plants	LTR	37202109	37202180	341	-	.	ID=135119	repeat_name=LTR_Gm_16_5341	repeat_type=LTRs	sequence=GCCCCTATAGCTCAGTGGTAGAGCGTCAGTCTTGTAAACTGAAGGTCCGTAGTTCGATCCTGCGTGGGGGC
2	Ensembl_Plants	tRNA	37880017	37880088	.	-	.	ID=gene:ENSRNA049438197	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon UUU	sequence=GCCGTCCTAGCTCAGTGGTAGAGCGCGTGGCTTTTAACCACGTGGTCGTGGGTTCGATCCCCACGGACGGCG	2	Ensembl_Plants	LTR	37879975	37880130	563	+	.	ID=35376	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=GCTGAAAAATGCTGCTAAAAAGTAACAAATAATAAAACGAGCGCCGTCCGTGGGGATCGAACCCACGACCACGTGGTTAAAAGCCACGCGCTCTACCACTGAGCTAGGACGGCTATGGATGCTCGTTGTTAAACTAAGACTTACTAGTCAGTACA
2	Ensembl_Plants	tRNA	39746973	39747054	.	-	.	ID=gene:ENSRNA049438170	Name=tRNA-Ser	biotype=tRNA	description=tRNA-Ser for anticodon AGA	sequence=GTGGTCGTGCCGGAGTGGTTATCGGGCATGACTAGAAATCATGTGGGCTTTGCCCGCGCAGGTTCGAATCCTGCCGACCACG	2	Ensembl_Plants	LTR	39746958	39747056	695	+	.	ID=35144	repeat_name=LTR_Al_scaffold_0001_223	repeat_type=LTRs	sequence=AAAACAGAAAAAAGCGTGGTCGGCAGGATTCGAACCTGCGCGGGCAAAGCCCACATGATTTCTAGTCATGCCCGATAACCACTCCGGCACGACCACTT
2	Ensembl_Plants	tRNA	45100268	45100341	.	-	.	ID=gene:ENSRNA049438152	Name=tRNA-Asn	biotype=tRNA	description=tRNA-Asn for anticodon GUU	sequence=GCTGGAATAGCTCAGTTGGTTAGAGCGTATGGCTGTTAACCATAAGGTCGGAGGTTCGAGCCCTCCTTCTAGCG	2	Ensembl_Plants	LTR	45100249	45100341	581	+	.	ID=35601	repeat_name=LTR_Mt_chr_05_619	repeat_type=LTRs	sequence=AAACAATAAAATAAAATGCGCTAGAAGGAGGGCTCGAACCTCCGACCTTATGGTTAACAGCCATACGCTCTAACCAACTGAGCTATTCCAGC
2	Ensembl_Plants	tRNA	48806949	48807021	.	+	.	ID=gene:ENSRNA049437983	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon CGC	sequence=GGGGGTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAGGCACGGGGTTCGATTCCCCGCACCTCCA	2	Ensembl_Plants	LTR	48806940	48807024	545	-	.	ID=18191	repeat_name=LTR_Gm_18_6105	repeat_type=LTRs	sequence=GAATGGAGGTGCGGGGAATCGAACCCCGTGCCTCTCGCATGCGAAGCGAGCGCTCTACCATATGAGCTACACCCCCGCTGTGTT
2	Ensembl_Plants	tRNA	46403702	46403775	.	+	.	ID=gene:ENSRNA049437913	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATAGGCCA	2	Ensembl_Plants	LTR	46403697	46403786	660	-	.	ID=4371	repeat_name=LTR_Al_scaffold_0002_362	repeat_type=LTRs	sequence=AAAAAAAAACATGGCCTATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCCTTCG
2	Ensembl_Plants	tRNA	3979266	3979338	.	+	.	ID=gene:ENSRNA049437683	Name=tRNA-Phe	biotype=tRNA	description=tRNA-Phe for anticodon GAA	sequence=GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCA	2	Ensembl_Plants	LTR	3979265	3979402	659	+	.	ID=38146	repeat_name=LTR_Mt_chr_05_582	repeat_type=LTRs	sequence=GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCAATGCCTTCTCCTTTTTTTTTTTGTCAATATTTTTTCCCATTCAACGTTCACTCGGTTTCTCTTT
9	Ensembl_Plants	tRNA	36135135	36135207	.	-	.	ID=gene:ENSRNA049434440	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon UGC	sequence=GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGCACGGGGTTCGATCCCCCGCATCTCCA	9	Ensembl_Plants	LTR	36135106	36135242	677	+	.	ID=18190	repeat_name=LTR_Gm_18_6105	repeat_type=LTRs	sequence=AAAAATAAAACAAAAAATAACAAAACGATGGAGATGCGGGGGATCGAACCCCGTGCCTCTCGCATGCAAAGCGAGCGCTCTACCATTTGAGCTACATCCCCATTTTTATTTTATTCTCCCTCCAAATTAATATATA
9	Ensembl_Plants	tRNA	36431239	36431311	.	-	.	ID=gene:ENSRNA049434447	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	9	Ensembl_Plants	LTR	36431217	36431324	716	+	.	ID=18189	repeat_name=LTR_Gm_18_6105	repeat_type=LTRs	sequence=AAAAAATAAAAATAAATAGAATGGAGATGCGGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCTTTTGTGTTATTG
9	Ensembl_Plants	tRNA	42816306	42816378	.	-	.	ID=gene:ENSRNA049434518	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon CUU	sequence=GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCG	9	Ensembl_Plants	LTR	42816306	42816387	583	-	.	ID=19680	repeat_name=LTR_AC183412.5_672	repeat_type=LTRs	sequence=ACACAACAGGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGC
9	Ensembl_Plants	tRNA	44687927	44688008	.	-	.	ID=gene:ENSRNA049434556	Name=tRNA-Ser	biotype=tRNA	description=tRNA-Ser for anticodon AGA	sequence=GTGGTCGTGCCGGAGTGGTTATCGGGCATGACTAGAAATCATGTGGGCTTTGCCCGCGCAGGTTCGAATCCTGCCGACCACG	9	Ensembl_Plants	LTR	44687917	44688013	715	+	.	ID=35139	repeat_name=LTR_Al_scaffold_0001_223	repeat_type=LTRs	sequence=GTAAAAAAACGTGGTCGGCAGGATTCGAACCTGCGCGGGCAAAGCCCACATGATTTCTAGTCATGCCCGATAACCACTCCGGCACGACCACTCTTG
9	Ensembl_Plants	tRNA	54273086	54273170	.	-	.	ID=gene:ENSRNA049434669	Name=tRNA-Tyr	biotype=tRNA	description=tRNA-Tyr for anticodon GUA	sequence=CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGTGTCGCAGATAAATCCTTAGGTCGCTGGTTCGAATCCGGCAGGTCGGA	9	Ensembl_Plants	LTR	54273060	54273173	661	+	.	ID=35137	repeat_name=LTR_Al_scaffold_0001_223	repeat_type=LTRs	sequence=AAAAACTGAAATCTAAAAAGAAATTTCCGACCTGCCGGATTCGAACCAGCGACCTAAGGATTTATCTGCGACACTACAGTCCTCCGCTCTACCAACTGAGCTAAGGTCGGTTT
9	Ensembl_Plants	tRNA	58356696	58356769	.	-	.	ID=gene:ENSRNA049434718	Name=tRNA-Asn	biotype=tRNA	description=tRNA-Asn for anticodon GUU	sequence=GCTGGAATAGCTCAGTTGGCCAGAGCGTGTGGCTGTTAACCACAAGGTCGGAGGTTCGAGCCCTCCTTCTAGCG	9	Ensembl_Plants	LTR	58356677	58356769	618	+	.	ID=35602	repeat_name=LTR_Mt_chr_05_619	repeat_type=LTRs	sequence=TTTTATCACACTAGAAATCGCTAGAAGGAGGGCTCGAACCTCCGACCTTGTGGTTAACAGCCACACGCTCTGGCCAACTGAGCTATTCCAGC
9	Ensembl_Plants	tRNA	57306257	57306330	.	+	.	ID=gene:ENSRNA049434746	Name=tRNA-Asn	biotype=tRNA	description=tRNA-Asn for anticodon GUU	sequence=GCTGGAATAGCTCAGTTGGTTAGAGCGTATGGCTGTTAACCATAAGGTCGGAGGTTCGAGCCCTCCTTCTAGCG	9	Ensembl_Plants	LTR	57306257	57306335	607	-	.	ID=35603	repeat_name=LTR_Mt_chr_05_619	repeat_type=LTRs	sequence=AAAATCGCTAGAAGGAGGGCTCGAACCTCCGACCTTATGGTTAACAGCCATACGCTCTAACCAACTGAGCTATTCCAG
9	Ensembl_Plants	tRNA	48598981	48599053	.	+	.	ID=gene:ENSRNA049434815	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	9	Ensembl_Plants	LTR	48598973	48599065	704	-	.	ID=18186	repeat_name=LTR_Gm_18_6105	repeat_type=LTRs	sequence=GAAAAATTAAAATGGAGATGCGGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCTTTTGGT
9	Ensembl_Plants	tRNA	16626109	16626182	.	+	.	ID=gene:ENSRNA049434999	Name=tRNA-Asn	biotype=tRNA	description=tRNA-Asn for anticodon GUU	sequence=GCTGGAATAGCTCAGTTGGCCAGAGCGTGTGGCTGTTAACCACAAGGTCGGAGGTTCGAGCCCTCCTTCTAGCG	9	Ensembl_Plants	LTR	16626109	16626182	587	-	.	ID=35607	repeat_name=LTR_Mt_chr_05_619	repeat_type=LTRs	sequence=CGCTAGAAGGAGGGCTCGAACCTCCGACCTTGTGGTTAACAGCCACACGCTCTGGCCAACTGAGCTATTCCAG
9	Ensembl_Plants	tRNA	15479748	15479820	.	+	.	ID=gene:ENSRNA049435021	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	9	Ensembl_Plants	LTR	15479730	15479894	497	+	.	ID=8543	repeat_name=LTR_Pp_scaffold_0002_25	repeat_type=LTRs	sequence=TTTAATTTATCATCACCGGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCATTTTTGTTTCCTTATTTTTTAAACGATATACACTTATCATTCCCCTGTTCATCTTACAAGCACCTTTTTTTTTT
9	Ensembl_Plants	tRNA	15479748	15479820	.	+	.	ID=gene:ENSRNA049435021	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	9	Ensembl_Plants	LTR	15479748	15479900	731	-	.	ID=18192	repeat_name=LTR_Gm_18_6105	repeat_type=LTRs	sequence=TACAGAAAAAAAAAAAGGTGCTTGTAAGATGAACAGGGGAATGATAAGTGTATATCGTTTAAAAAATAAGGAAACAAAAATGGAGATGCGGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCC
9	Ensembl_Plants	tRNA	4524955	4525027	.	+	.	ID=gene:ENSRNA049435088	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon UGC	sequence=GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGCACGGGGTTCGATCCCCCGCATCTCCA	9	Ensembl_Plants	LTR	4524951	4525040	636	-	.	ID=44002	repeat_name=LTR_Mt_chr_02_162	repeat_type=LTRs	sequence=AATAAAAAAGAAATGGAGATGCGGGGGATCGAACCCCGTGCCTCTCGCATGCAAAGCGAGCGCTCTACCATTTGAGCTACATCCCCTTA
9	Ensembl_Plants	tRNA	3920904	3920976	.	+	.	ID=gene:ENSRNA049435112	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	9	Ensembl_Plants	LTR	3920902	3921027	710	-	.	ID=43998	repeat_name=LTR_Mt_chr_02_162	repeat_type=LTRs	sequence=GGTTAAAACAAATACGTTGGAAAATAAACTAGAAAAAGAAAAGCAAAATTGTGGAGATGCGGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCG
9	Ensembl_Plants	tRNA	3917414	3917486	.	+	.	ID=gene:ENSRNA049435119	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon AGC	sequence=GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA	9	Ensembl_Plants	LTR	3917391	3917525	698	-	.	ID=43999	repeat_name=LTR_Mt_chr_02_162	repeat_type=LTRs	sequence=TGCAGGCACAAAACAAAGGAATGCAAAAATAAAACTAGATGGAGATGCGGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCTTCTACGTTGTTTTTGTTGCTA
9	Ensembl_Plants	tRNA	928091	928172	.	+	.	ID=gene:ENSRNA049435200	Name=tRNA-Ser	biotype=tRNA	description=tRNA-Ser for anticodon CGA	sequence=GTCGATATGTCCGAGTGGTTAAGGAGACAGACTCGAAATCTGTTGGGCTTTGCCTGCGCAGGTTCGAATCCTGCTGTCGACG	9	Ensembl_Plants	LTR	928087	928177	419	-	.	ID=35145	repeat_name=LTR_Al_scaffold_0001_223	repeat_type=LTRs	sequence=AAATGCGTCGACAGCAGGATTCGAACCTGCGCAGGCAAAGCCCAACAGATTTCGAGTCTGTCTCCTTAACCACTCGGACATATCGACTTG
6	Ensembl_Plants	tRNA	34350151	34350222	.	+	.	ID=gene:ENSRNA049436925	Name=tRNA-Thr	biotype=tRNA	description=tRNA-Thr for anticodon UGU	sequence=GCCCCTATAGCTCAGTGGTAGAGCGTCAGTCTTGTAAACTGAAGGTCCGTAGTTCGATCCTGCGTGGGGGCA	6	Ensembl_Plants	LTR	34350150	34350243	337	+	.	ID=135117	repeat_name=LTR_Gm_16_5341	repeat_type=LTRs	sequence=GCCCCTATAGCTCAGTGGTAGAGCGTCAGTCTTGTAAACTGAAGGTCCGTAGTTCGATCCTGCGTGGGGGCATTTTTTTATTCCCATTTTTTT
6	Ensembl_Plants	tRNA	31728112	31728185	.	+	.	ID=gene:ENSRNA049436896	Name=tRNA-Ile	biotype=tRNA	description=tRNA-Ile for anticodon AAU	sequence=GGCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA	6	Ensembl_Plants	LTR	31728103	31728213	654	-	.	ID=4366	repeat_name=LTR_Al_scaffold_0002_362	repeat_type=LTRs	sequence=AACGTGAAAACTAAAAAGATAATAATTTTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCCGCTTGATG
6	Ensembl_Plants	tRNA	29415177	29415249	.	+	.	ID=gene:ENSRNA049436847	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon CGC	sequence=GGGGACGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAGGCACGGGGTTCGATTCCCCGCGTCTCCA	6	Ensembl_Plants	LTR	29415174	29415251	515	-	.	ID=18183	repeat_name=LTR_Gm_18_6105	repeat_type=LTRs	sequence=GATGGAGACGCGGGGAATCGAACCCCGTGCCTCTCGCATGCGAAGCGAGCGCTCTACCATATGAGCTACGTCCCCGT
6	Ensembl_Plants	tRNA	495740	495812	.	+	.	ID=gene:ENSRNA049436736	Name=tRNA-Phe	biotype=tRNA	description=tRNA-Phe for anticodon GAA	sequence=GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCA	6	Ensembl_Plants	LTR	495739	495872	752	+	.	ID=38143	repeat_name=LTR_Mt_chr_05_582	repeat_type=LTRs	sequence=GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCATTTGGTTTTTTTTATTATTTTCAACTTTGCTTAGTGTTTCATCTTGTCGAAGATCCTGCT
1	Ensembl_Plants	tRNA	32309402	32309474	.	+	.	ID=gene:ENSRNA049439276	Name=tRNA-Phe	biotype=tRNA	description=tRNA-Phe for anticodon GAA	sequence=GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCA	1	Ensembl_Plants	LTR	32309401	32309514	712	+	.	ID=38144	repeat_name=LTR_Mt_chr_05_582	repeat_type=LTRs	sequence=GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCACGCTATTTATTTTGCCATATATTTCCTTCTTTTTCTTTTT
1	Ensembl_Plants	tRNA	32347536	32347608	.	+	.	ID=gene:ENSRNA049439294	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon UGC	sequence=GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGCACGGGGTTCGATCCCCCGCATCTCCA	1	Ensembl_Plants	LTR	32347527	32347726	553	-	.	ID=43996	repeat_name=LTR_Mt_chr_02_162	repeat_type=LTRs	sequence=AAAAGGGAAACAAGTTTTTTTTGAAATAAAAAAAGGGAAACAAGTTTTTTTTGAAATAAAAAAAGGGAAACAAGTGAGCTGGACTGATGAAAATAAAAAAAAAGAAAACCAAATTATCTGGAGATGCGGGGGATCGAACCCCGTGCCTCTCGCATGCAAAGCGAGCGCTCTACCATTTGAGCTACATCCCCTTTGTGCT
1	Ensembl_Plants	tRNA	39823177	39823249	.	-	.	ID=gene:ENSRNA049439453	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon CGC	sequence=GGGGACGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAGGCACGGGGTTCGATTCCCCGCGTCTCCA	1	Ensembl_Plants	LTR	39823163	39823252	520	+	.	ID=18187	repeat_name=LTR_Gm_18_6105	repeat_type=LTRs	sequence=GAAAATGGAGTCTTGGAGACGCGGGGAATCGAACCCCGTGCCTCTCGCATGCGAAGCGAGCGCTCTACCATATGAGCTACGTCCCCGTT
1	Ensembl_Plants	tRNA	34926990	34927061	.	-	.	ID=gene:ENSRNA049439473	Name=tRNA-Met	biotype=tRNA	description=tRNA-Met for anticodon CAU	sequence=ATCAGAGTGGCGCAGCGGAAGCGTGGTGGGCCCATAACCCACAGGTCCCAGGATCGAAACCTGGCTCTGATA	1	Ensembl_Plants	LTR	34926980	34927076	410	-	.	ID=4871	repeat_name=LTR_AC190610.2_6327	repeat_type=LTRs	sequence=ACATCCGTCACAAAGATCAGAGTGGCGCAGCGGAAGCGTGGTGGGCCCATAACCCACAGGTCCCAGGATCGAAACCTGGCTCTGATAATTTCCAGT
1	Ensembl_Plants	tRNA	32312289	32312360	.	-	.	ID=gene:ENSRNA049439511	Name=tRNA-Thr	biotype=tRNA	description=tRNA-Thr for anticodon UGU	sequence=GCCCCTATAGCTCAGTGGTAGAGCGTCAGTCTTGTAAACTGAAGGTCTGTAGTTCGATCCTGCATGGGGGCA	1	Ensembl_Plants	LTR	32312263	32312360	408	-	.	ID=135118	repeat_name=LTR_Gm_16_5341	repeat_type=LTRs	sequence=GCCCCTATAGCTCAGTGGTAGAGCGTCAGTCTTGTAAACTGAAGGTCTGTAGTTCGATCCTGCATGGGGGCATTTTTTTATTTGAATTTTTTGTTTA
1	Ensembl_Plants	tRNA	27731233	27731314	.	-	.	ID=gene:ENSRNA049439577	Name=tRNA-Ser	biotype=tRNA	description=tRNA-Ser for anticodon AGA	sequence=GTGGTCGTGCCGGAGTGGTTATCGGGCATGACTAGAAATCATGTGGGCTTTGCCCGCGCAGGTTCGAATCCTGCCGACCACG	1	Ensembl_Plants	LTR	27731205	27731316	685	+	.	ID=35138	repeat_name=LTR_Al_scaffold_0001_223	repeat_type=LTRs	sequence=GAAAAATAGCAAAACAAAAAAAAAAGGCGTGGTCGGCAGGATTCGAACCTGCGCGGGCAAAGCCCACATGATTTCTAGTCATGCCCGATAACCACTCCGGCACGACCACTT
1	Ensembl_Plants	tRNA	9894565	9894637	.	-	.	ID=gene:ENSRNA049439650	Name=tRNA-Ala	biotype=tRNA	description=tRNA-Ala for anticodon CGC	sequence=GGGGGTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAGGCACGGGGTTCGATTCCCCGCACCTCCA	1	Ensembl_Plants	LTR	9894560	9894637	529	+	.	ID=44000	repeat_name=LTR_Mt_chr_02_162	repeat_type=LTRs	sequence=ATAATGGAGGTGCGGGGAATCGAACCCCGTGCCTCTCGCATGCGAAGCGAGCGCTCTACCATATGAGCTACACCCCC
1	Ensembl_Plants	tRNA	6860872	6860943	.	-	.	ID=gene:ENSRNA049439682	Name=tRNA-Asp	biotype=tRNA	description=tRNA-Asp for anticodon GUC	sequence=GTCGTTGTAGTATAGTGGTGAGTATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCCCCGGCAACGGCG	1	Ensembl_Plants	LTR	6860872	6860944	600	+	.	ID=44445	repeat_name=LTR_Gr_chr_11_2758	repeat_type=LTRs	sequence=GCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATACTCACCACTATACTACAACGACT
1	Ensembl_Plants	tRNA	764517	764588	.	-	.	ID=gene:ENSRNA049439774	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon UUU	sequence=GCCATCCTAGCTCAGTGGTAGAGCGCGTGGCTTTTAACCACGTGGTCGTGGGTTCGATCCCCACGGATGGCG	1	Ensembl_Plants	LTR	764512	764589	606	+	.	ID=35377	repeat_name=LTR_Gm_08_2830	repeat_type=LTRs	sequence=AAAACGCCATCCGTGGGGATCGAACCCACGACCACGTGGTTAAAAGCCACGCGCTCTACCACTGAGCTAGGATGGCT
8	Ensembl_Plants	tRNA	36857059	36857132	.	+	.	ID=gene:ENSRNA049437405	Name=tRNA-Asn	biotype=tRNA	description=tRNA-Asn for anticodon GUU	sequence=GCTGGAATAGCTCAGTTGGTTAGAGCGTGTGGCTGTTAACCACAAGGTCGGAGGTTCAAGCCCTCCTTCTAGCG	8	Ensembl_Plants	LTR	36857055	36857139	702	-	.	ID=35610	repeat_name=LTR_Mt_chr_05_619	repeat_type=LTRs	sequence=AAAAATTCGCTAGAAGGAGGGCTTGAACCTCCGACCTTGTGGTTAACAGCCACACGCTCTAACCAACTGAGCTATTCCAGCAGT
8	Ensembl_Plants	tRNA	40359507	40359579	.	+	.	ID=gene:ENSRNA049437418	Name=tRNA-Lys	biotype=tRNA	description=tRNA-Lys for anticodon CUU	sequence=GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCG	8	Ensembl_Plants	LTR	40359504	40359581	586	+	.	ID=19681	repeat_name=LTR_AC183412.5_672	repeat_type=LTRs	sequence=AAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCGTC
8	Ensembl_Plants	tRNA	33327206	33327293	.	-	.	ID=gene:ENSRNA049437440	Name=tRNA-Tyr	biotype=tRNA	description=tRNA-Tyr for anticodon GUA	sequence=CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGTGCGTTGCAGATTAAATCCTTAGGTCGCTGGTTCGAATCCGGCAGGTCGGA	8	Ensembl_Plants	LTR	33327193	33327296	620	+	.	ID=35142	repeat_name=LTR_Al_scaffold_0001_223	repeat_type=LTRs	sequence=AGGAAAAATTCATCCGACCTGCCGGATTCGAACCAGCGACCTAAGGATTTAATCTGCAACGCACTACAGTCCTCCGCTCTACCAACTGAGCTAAGGTCGGTTT
8	Ensembl_Plants	tRNA	1104256	1104327	.	-	.	ID=gene:ENSRNA049437524	Name=tRNA-Pro	biotype=tRNA	description=tRNA-Pro for anticodon CGG	sequence=GGGTGTTTGGTCTAGTGGTATGATTCTCGCTTCGGGTGCGAGAGGTCGCGAGTTCGATTCTCGCAACACCCC	8	Ensembl_Plants	LTR	1104240	1104329	425	-	.	ID=43014	repeat_name=LTR_Gr_chr_12_2845	repeat_type=LTRs	sequence=CAGGGTGTTTGGTCTAGTGGTATGATTCTCGCTTCGGGTGCGAGAGGTCGCGAGTTCGATTCTCGCAACACCCCCATGCTATTTTTGAT
1	Ensembl_Plants	pre_miRNA	1766012	1766161	.	-	.	ID=gene:ENSRNA049459255	Name=MIR821	biotype=pre_miRNA	description=microRNA MIR821	sequence=TACTCCCTCCAGCCCAAATTACTATTCGTTTTGGCTTTTCCAGATACAAAACTTTTGATATAGATCTAGATGTATGTATGTCTAGATACGTAGCAAAATCTATGTATCTAGAAAAGCCAAAACGAATAATAATTTGGGACGGAGGGAGTA	1	Ensembl_Plants	DNA/Mite	1766012	1766161	896	-	.	ID=134134	repeat_name=sb_mite_sek_2_73	repeat_type=Type II Transposons	sequence=TACTCCCTCCAGCCCAAATTACTATTCGTTTTGGCTTTTCCAGATACAAAACTTTTGATATAGATCTAGATGTATGTATGTCTAGATACGTAGCAAAATCTATGTATCTAGAAAAGCCAAAACGAATAATAATTTGGGACGGAGGGAGT
1	Ensembl_Plants	pre_miRNA	1766012	1766161	.	-	.	ID=gene:ENSRNA049459255	Name=MIR821	biotype=pre_miRNA	description=microRNA MIR821	sequence=TACTCCCTCCAGCCCAAATTACTATTCGTTTTGGCTTTTCCAGATACAAAACTTTTGATATAGATCTAGATGTATGTATGTCTAGATACGTAGCAAAATCTATGTATCTAGAAAAGCCAAAACGAATAATAATTTGGGACGGAGGGAGTA	1	Ensembl_Plants	LTR	1766120	1766178	247	+	.	ID=145381	repeat_name=LTR_Sb_chr_04_828	repeat_type=LTRs	sequence=GGAAAAGCCAAAACGAATAGTAATTTGGGCTGGAGGGAGTAGGTTTTTATAGGCTCAT
3	Ensembl_Plants	pre_miRNA	22690021	22690214	.	+	.	ID=gene:ENSRNA049457633	Name=MIR821	biotype=pre_miRNA	description=microRNA MIR821	sequence=ATGAGCTAATTACAAAACTAATTGCAGAACCCCTAGGCTAAATCGCGAAACGAATCTATTAAGCCTAATTAATCCATCATTAGTGAATGTTTACTGTAGCACCATATTGTCAAATCATGGACAAATTAGGCTTAATAGATGTCGTCTCGTGATTTAGCCTAGGGGTTGTGAAATTGGTTTTGTAATTAGCCTAT	3	Ensembl_Plants	LTR/Gypsy	22690124	22690254	289	+	.	ID=113504	repeat_name=LTR_Sb_chr_07_946	repeat_type=LTRs	sequence=TATTGTCAAATCATGGACAAATTAGGCTTAATAGATGTCGTCTCGTGATTTAGCCTAGGGGTTGTGAAATTGGTTTTGTAATTAGCCTATGTTTAATACTCCTAATTAGTGTCCAAATATTCGATGTGAC
5	Ensembl_Plants	pre_miRNA	2004005	2004208	.	-	.	ID=gene:ENSRNA049454663	Name=MIR159	biotype=pre_miRNA	description=microRNA MIR159	sequence=GCAAAGACTGAAGAGCTCCCTTCGATCCAATCCAGGAGGGGAAGTGGTGTGATGCAGCTGCCGGTTCATGGATACCTCTCTTGTGCAGCAATGATCGGTGTGTTCACCTGCCTGCACTTGCATGGGTGTGCATGACCCGGGAGATGAACCCACCAGCATCTTTCCCTCGTGCTTGGATTGAAGGGAGCTCCTCTCTCCCTCTCT	5	Ensembl_Plants	LTR	2004008	2004199	1027	+	.	ID=90638	repeat_name=LTR_Os_chr_01_31	repeat_type=LTRs	sequence=AGGGAGAGAGGAGCTCCCTTCAATCCAAGCACGAGGGAAAGATGCTGGTGGGTTCATCTCCCGGGTCATGCACACCCATGCAAGTGCAGGCAGGTGAACACACCGATCATTGCTGCACAAGAGAGGTATCCATGAACCGGCAGCTGCATCACACCACTTCCCCTCCTGGATTGGATCGAAGGGAGCTCTTC
1	Ensembl_Plants	pre_miRNA	39751214	39751374	.	+	.	ID=gene:ENSRNA049454275	Name=MIR821	biotype=pre_miRNA	description=microRNA MIR821	sequence=AACATGTACTCCCTCCATCCTAAATTATAAGTCGCTTTGACTTTTTTGGTACATCCACTTTGCTATGCATCTAGACATATTGTTATATCTATATACATAGCAAAGTGAATGTATCAAAAAGTCAAAGCGACTTATAATTTAGGATGGAGGGAGTACATCTT	1	Ensembl_Plants	DNA/Mite	39751220	39751368	1029	+	.	ID=46129	repeat_name=sb_mite_sek_2_74	repeat_type=Type II Transposons	sequence=ACTCCCTCCATCCTAAATTATAAGTCGCTTTGACTTTTTTGGTACATCCACTTTGCTATGCATCTAGACATATTGTTATATCTATATACATAGCAAAGTGAATGTATCAAAAAGTCAAAGCGACTTATAATTTAGGATGGAGGGAGTA
1	Ensembl_Plants	pre_miRNA	39751214	39751374	.	+	.	ID=gene:ENSRNA049454275	Name=MIR821	biotype=pre_miRNA	description=microRNA MIR821	sequence=AACATGTACTCCCTCCATCCTAAATTATAAGTCGCTTTGACTTTTTTGGTACATCCACTTTGCTATGCATCTAGACATATTGTTATATCTATATACATAGCAAAGTGAATGTATCAAAAAGTCAAAGCGACTTATAATTTAGGATGGAGGGAGTACATCTT	1	Ensembl_Plants	LTR	39751196	39751219	486	+	.	ID=91110	repeat_name=LTR_AC199549.2_11762	repeat_type=LTRs	sequence=TGAAAAAAATTGCTTAAAACATG
1	Ensembl_Plants	pre_miRNA	39787250	39787358	.	-	.	ID=gene:ENSRNA049454216	Name=MIR164	biotype=pre_miRNA	description=microRNA MIR164	sequence=CAAACCCTGCTGGAGAAGCAGGGCACGTGCTCGGTCGATCGGCCGGCCGGGCAGCCCGCTGCATGCATGGTCGATCGCAGCACGTGCGCTCCTTCTCCATCATGGATTC	1	Ensembl_Plants	LTR	39787144	39787374	583	+	.	ID=14209	repeat_name=LTR_AC196368.2_8628	repeat_type=LTRs	sequence=TTCTTACCAACGCATCCGTCGATCCACCGCCACCGCTGCCGCCGCCGGCCGCCGATGAGAGCCCTCCCATTGCGCAAGCTTAAGGCGATCGAACCGACGGGGCGAGAATCCATGATGGAGAAGGAGCGCACGTGCTGCGATCGACCATGCATGCAGCGGGCTGCCCGGCCGGCCGATCGACCGAGCACGTGCCCTGCTTCTCCAGCAGGGTTTGCTCGCCCCTCCTCATG
1	Ensembl_Plants	pre_miRNA	39167044	39167208	.	+	.	ID=gene:ENSRNA049454140	Name=MIR821	biotype=pre_miRNA	description=microRNA MIR821	sequence=GCTTCTATATACTTCCTCCGTCGCAAATTGTAGGTAGTTTTGGTATTTCTAGGTTCATAGGTTTTGCTATGCACCTAGATATGTATTATATCTAGATACATAACAAAAGTTATGAATCTAAATATGCTAAAACGACCTACAATTTGGGACGGAGGGAGTAGAAGC	1	Ensembl_Plants	DNA/Mite	39167053	39167203	900	+	.	ID=133615	repeat_name=sb_mite_sek_2_73	repeat_type=Type II Transposons	sequence=ACTTCCTCCGTCGCAAATTGTAGGTAGTTTTGGTATTTCTAGGTTCATAGGTTTTGCTATGCACCTAGATATGTATTATATCTAGATACATAACAAAAGTTATGAATCTAAATATGCTAAAACGACCTACAATTTGGGACGGAGGGAGTA
1	Ensembl_Plants	pre_miRNA	39167044	39167208	.	+	.	ID=gene:ENSRNA049454140	Name=MIR821	biotype=pre_miRNA	description=microRNA MIR821	sequence=GCTTCTATATACTTCCTCCGTCGCAAATTGTAGGTAGTTTTGGTATTTCTAGGTTCATAGGTTTTGCTATGCACCTAGATATGTATTATATCTAGATACATAACAAAAGTTATGAATCTAAATATGCTAAAACGACCTACAATTTGGGACGGAGGGAGTAGAAGC	1	Ensembl_Plants	LTR	39167023	39167052	437	+	.	ID=134676	repeat_name=LTR_Sb_chr_01_154	repeat_type=LTRs	sequence=AATAGGTTTTCTGTATAGCTGCTTCTATA
2	Ensembl_Plants	pre_miRNA	41724163	41724287	.	-	.	ID=gene:ENSRNA049453875	Name=MIR821	biotype=pre_miRNA	description=microRNA MIR821	sequence=TACCCCTCCGTCCCAAATTTCTATTCGTTTTGACTTTTCTAGATACATAACTTTTGTTATGCACATAACAAAAGTTATGCATCTAGAAAAGCTAAAACAAATAGTAATTTGTGACAGAGGGAGTA	2	Ensembl_Plants	DNA/Mite	41724163	41724284	506	-	.	ID=134025	repeat_name=sb_mite_sek_2_73	repeat_type=Type II Transposons	sequence=CCCTCCGTCCCAAATTTCTATTCGTTTTGACTTTTCTAGATACATAACTTTTGTTATGCACATAACAAAAGTTATGCATCTAGAAAAGCTAAAACAAATAGTAATTTGTGACAGAGGGAGT
2	Ensembl_Plants	pre_miRNA	2422472	2422581	.	-	.	ID=gene:ENSRNA049452713	Name=mir-160	biotype=pre_miRNA	description=mir-160 microRNA precursor family	sequence=ATATGCCTGGCTCCCTGTATGCCACTCGCACGGCTACCACCTGGACGATCATATCGGAGCCCTGATCGATCGGTGGCCGATGCGGCTGGCGTGCGAGGTGCCAAGCATGG	2	Ensembl_Plants	LTR/Gypsy	2422419	2422498	329	-	.	ID=89719	repeat_name=LTR_AC200201.1_12237_2frag	repeat_type=LTRs	sequence=GGCTGGCGTGCGAGGTGCCAAGCATGGCCCTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
3	Ensembl_Plants	SRP_RNA	45892263	45892583	.	-	.	ID=gene:ENSRNA049458731	Name=Plant_SRP	biotype=SRP_RNA	description=Plant signal recognition particle RNA	sequence=GCCGAGCTCGGTTGCGCGGGCTTGTAACCCAAGTGGGGGCATTAAGGTGGTGTGGATGTTTGGTGCGGACTCTAAGGTTAAGTCTGTGGTGTGCCCTTGCTGGCCCTGCCCATTCCAAGTTGTAATGGCTTGTGCAGCCCAAGTGAAAGCTCAGGCTTCGCTGGACCTGAAGTGGGGGCTTCGTTGGACCTGAAGTGGCATGAACAACGTGAGGCTGGCTTCACAGAGCAGCGATCACTGCCCACTTCGAACGGTGGAAAGCTAACAGGCCACTACATCACGGGTCCGACCTGGATCCCGAAGAGCCGGTGGCGAGGATTA	3	Ensembl_Plants	LTR	45892309	45892619	545	+	.	ID=13993	repeat_name=LTR_AC198290.2_10424	repeat_type=LTRs	sequence=AGTGGCCTGTTAGCTTTCCACCGTTCGAAGTGGGCAGTGATCGCTGCTCTGTGAAGCCAGCCTCACGTTGTTCATGCCACTTCAGGTCCAACGAAGCCCCCACTTCAGGTCCAGCGAAGCCTGAGCTTTCACTTGGGCTGCACAAGCCATTACAACTTGGAATGGGCAGGGCCAGCAAGGGCACACCACAGACTTAACCTTAGAGTCCGCACCAAACATCCACACCACCTTAATGCCCCCACTTGGGTTACAAGCCCGCGCAACCGAGCTCGGCGAGGATGGCTCCCGAGGACGAACATTTAAGCTGGTG
9	Ensembl_Plants	SRP_RNA	53206666	53206964	.	-	.	ID=gene:ENSRNA049457857	Name=Plant_SRP	biotype=SRP_RNA	description=Plant signal recognition particle RNA	sequence=GCCGAGCTCGGTTGCATGGGCTTGTAACCCAAGTGGGGGCATTAAGGTGGTGTTGATGTTTGGTGCGGACTCTGAGTTTGGGTATGTGGTGTGCCCTTGCTAGCCTTACCCGTTCCAAGTTGGTAGTGGCATGTGCGGCCAAAGCAAAAGCTCGGGCTTCACTGGACCTGAAGTGGCCTGTATGGCGTGAGGTTGGCTTCACAGAGCAGCGATCACTGCCCGCTTCCAATGGTGGACGGATAACAAGCCGCTACATCACGGGCCCGACCTGGACCCCGAGGAGCCGGCGGCGAGAATCG	9	Ensembl_Plants	LTR	53206701	53207000	689	+	.	ID=13996	repeat_name=LTR_AC198290.2_10424	repeat_type=LTRs	sequence=GCCCGTGATGTAGCGGCTTGTTATCCGTCCACCATTGGAAGCGGGCAGTGATCGCTGCTCTGTGAAGCCAACCTCACGCCATACAGGCCACTTCAGGTCCAGTGAAGCCCGAGCTTTTGCTTTGGCCGCACATGCCACTACCAACTTGGAACGGGTAAGGCTAGCAAGGGCACACCACATACCCAAACTCAGAGTCCGCACCAAACATCAACACCACCTTAATGCCCCCACTTGGGTTACAAGCCCATGCAACCGAGCTCGGCGAGGATGGCTTGCGAGGACGAACATTTAAGCTGGTG
9	Ensembl_Plants	SRP_RNA	54276442	54276747	.	-	.	ID=gene:ENSRNA049457841	Name=Plant_SRP	biotype=SRP_RNA	description=Plant signal recognition particle RNA	sequence=GCTGAGCTCGGTTGCGCGGGCTTGTAACCCAAGTGGGGGCATTAAAGTGGTGTGGATGTTTAGTGCGGACTCTGGGTTTGAGTCTGTGGTGTGCTCTTGCTGGCCCTGCCCGTTCCAAGTTGGTAGTGGCCTATGCAGCCCAGGCGAAAGCTTGGGCTTTATTGGACCTGAAGTGGCAGGAACGGCGTGAGGCTGGTTTCACAGAGCAGCGATCACTGCCCGCTTCCAACGGTGGAAGGATGACAGGCCGCTACATCACGGGCCCAATACAGGCTCAGGGTCCCTCTACAACAGACCATCATCTTT	9	Ensembl_Plants	LTR	54276430	54276782	872	+	.	ID=13998	repeat_name=LTR_AC198290.2_10424	repeat_type=LTRs	sequence=AAAATTACAAAAAAGATGATGGTCTGTTGTAGAGGGACCCTGAGCCTGTATTGGGCCCGTGATGTAGCGGCCTGTCATCCTTCCACCGTTGGAAGCGGGCAGTGATCGCTGCTCTGTGAAACCAGCCTCACGCCGTTCCTGCCACTTCAGGTCCAATAAAGCCCAAGCTTTCGCCTGGGCTGCATAGGCCACTACCAACTTGGAACGGGCAGGGCCAGCAAGAGCACACCACAGACTCAAACCCAGAGTCCGCACTAAACATCCACACCACTTTAATGCCCCCACTTGGGTTACAAGCCCGCGCAACCGAGCTCAGCGAGGATGGCTCCCGAGGACGAAATTTAAGGCGGTG
7	Ensembl_Plants	SRP_RNA	29112063	29112383	.	-	.	ID=gene:ENSRNA049457206	Name=Plant_SRP	biotype=SRP_RNA	description=Plant signal recognition particle RNA	sequence=GCCGAGCTCGGTTGCGCGGGCTTGTAACCCAAGTGGGGGCATTAAGGTGGTGTGGATGTTTGGTACGGACTCTGAGGTTAAGTCTGTGGTGTGCCCTTGCTGGCCCTGCCCATTCCAAGTTGTAATGGCTTGTGCAGCCCAAGTGAAAGCTCAGGCTTCGCTGGACCTGAAGTGGGGGCTTCATTGGTCCTGAAGTGGCATGAACAACGTGAGGCTGGCTTCACAGAGCAGCGATCACTGCCCACTTCGAACGGTGGAAAGCTAACAGGCCACTACATCACGGGTCCGACCTGGATCCCGAAGAGCCGGTGGCGAGGATTA	7	Ensembl_Plants	LTR	29112109	29112419	576	+	.	ID=13994	repeat_name=LTR_AC198290.2_10424	repeat_type=LTRs	sequence=AGTGGCCTGTTAGCTTTCCACCGTTCGAAGTGGGCAGTGATCGCTGCTCTGTGAAGCCAGCCTCACGTTGTTCATGCCACTTCAGGACCAATGAAGCCCCCACTTCAGGTCCAGCGAAGCCTGAGCTTTCACTTGGGCTGCACAAGCCATTACAACTTGGAATGGGCAGGGCCAGCAAGGGCACACCACAGACTTAACCTCAGAGTCCGTACCAAACATCCACACCACCTTAATGCCCCCACTTGGGTTACAAGCCCGCGCAACCGAGCTCGGCGAGGATGGCTCGCGAGGACGAACATTTAAGCTGGTG
9	Ensembl_Plants	SRP_RNA	36217862	36218160	.	+	.	ID=gene:ENSRNA049456388	Name=Plant_SRP	biotype=SRP_RNA	description=Plant signal recognition particle RNA	sequence=GCCGAGCTCAGTTGCGTGGGCTTGTAACCCAAGTGGGGGCATTAAGGTGGTGTGGATGTTTGGTGCAGACTCTGGGCTTGGGTCTGTGGTGTGTCCTTGCTAGCCCTGCCCGTTCCAAGTTGGTAGTGGCCTGTGCGGCCCAAGTAAAAGCTCGGGCTTCACTGGACCTGAAGTGGCAGGAACGGCATGAGGCTAGCTTCACAGAGCAGCGATCACTGCTCGCTTCCAACGGTGGAAGGATAACAGACCGCTACATCACGGGCCCGACCTGGACCCCGAGGAGCCGGCAGCAAGGATCG	9	Ensembl_Plants	LTR	36217826	36218125	770	-	.	ID=14000	repeat_name=LTR_AC198290.2_10424	repeat_type=LTRs	sequence=GGCCCGTGATGTAGCGGTCTGTTATCCTTCCACCGTTGGAAGCGAGCAGTGATCGCTGCTCTGTGAAGCTAGCCTCATGCCGTTCCTGCCACTTCAGGTCCAGTGAAGCCCGAGCTTTTACTTGGGCCGCACAGGCCACTACCAACTTGGAACGGGCAGGGCTAGCAAGGACACACCACAGACCCAAGCCCAGAGTCTGCACCAAACATCCACACCACCTTAATGCCCCCACTTGGGTTACAAGCCCACGCAACTGAGCTCGGCGAGGATGGCTCGCGAGGACGAACATTTAAGCTGGT
5	Ensembl_Plants	SRP_RNA	8985552	8985762	.	-	.	ID=gene:ENSRNA049454721	Name=Plant_SRP	biotype=SRP_RNA	description=Plant signal recognition particle RNA	sequence=CTCTGGGCTTGGATCTATTGTGTGCCTTTGCTGGCCCTGCTCGTTCCAAGTTGGTAGTGGCCTGTTTGGCCCAAGCGAAAGCTCAGGCTTCATTGGACCTGAAGTGGTAGGAACGGCGTGAGGTTGGGTTCACAGAGCAGCGATCACTGCTCGCTTCCAACGGTGGAAGGATAACAGGCCGCTACATCACGGGCCCAACCTGGACCAGGAG	5	Ensembl_Plants	LTR/Copia	8985761	8987726	11375	+	.	ID=57048	repeat_name=LTR_AC194925.2_4768	repeat_type=LTRs	sequence=GCCCAGATACTTACATTGACAAAGTGTTGAAGCGGTTCAGCATGGAAGAGGCAAAGAAAGGGTTCTTGCCTATGTCACATGGCATACATCTCAGCAAGACTCAGTGTCCTTCGACTGCTGATGAGCGGGATCGCATGAGTAGAGTGCCATATGCCTCGGCTATTGGATCTATCATGTATGCAATGATAAGTACTCGCCCAGATGTTTCATATGCGCTAAGTATGACAAGTAGACACCAATCTGATCCAGGTGAGAGTCACTGGACAGCGGCGAAAAACATTCTTAAGTACTTGAGAAGGACTAAAGATATGTTCCTCGTCTATGGAGGTGAGGAGGAGCTCGTTGTAACAGGTTACACCGATGCTAGTTTCCAAACCGACAGAGATGATTCAAAGTCACAATCAGGATTTGTCTTCACGCTAAATGGTGGTGCTGTTAGTTGGAAGAGTTCCAAGCAGGAGACGGTGGCCGATTCTACGACAGAAGCCGAGTACATCGCGGCTTCGGAAGCCGCGAAGGAAGGTGTTTGGATAAGGAATTTCCTCATTGAGCTTGGTGTGTTCCCGAATGCGTCCAGCCCATTGAATCTCTACTGTGATAACAATGGGGCAATTGCGCAAGCAAAGGAGCCAAGGAACCACCAGAAGAACAAACACGTAATGCGGCGATTTCATCTCATTCGAGACTTCGTTAACCGGGGTGAGATCAAGATATGCAAAATACACACGGATCTGAACATTTCTGATCCGTTGACAAAACCACTCCCGCAGGCTAAGCATGATGCGCATGTAAGAGCTATGGGTATTAGGTACCTTCTAGATTGACTCTAGTGCAAGTGGGAGACTGTTGGAGGTATGCCCTAGAGGCAATCATAGAGATGATGATATTCCATTTGTATCCATGATTTGTATATTGTGTTCATTGAATATCCATTAAAGGCTACTTGAATTGATTGCAATTATGTGAATTGTATGTGAAACTCTTTACTTGTATGGTTATTCTAAAGTTGTCCCTAGTCGGAGTTCATGTAAGGACACACATGAATATAAGACTAGCACATGTATTAGTTGATGACTATGTTTCACAAGTCATGGACATGGAGATGTTGAACTAATAATGTGGACACATGTGGAGACATGTGTTAGGACTGACCCAACACGAGAAGTAGTTCTCTCTTTAAACAACATATACGCTTTGTCCTTAGACCTGAGATTGTCGCATGTATTCTAGATGTGGATCGACCTACTTAGGGGCTATCAAACGCTACACCGTAACAGGGTAGTTATAAAGGTAGCTTTCGGGTTTGTCAAGAAGCATGCTATGAGACATGGTCAATCAAGATGGGATTTGCCCCTCTCTGATTGAGAGTGATATCTCTGGGCCCCTCGAGTGATCGGATCCGAAAATGCATGGCCATGCTACGTACGGTTAAGAGTTAACCTACAAAGGGATTCCGAATCATAGGATCGAGAAAGAGTGGTCGGCTTGAAGCTAGACCAAATATCGTGAGGCAAAGGGAATAGCATGTATATCATGTTGTGATGGTTCGTCTGATATGATCTTCGTATACGTATAGGAGTTGGCACGTCTTGCTAGAGGCCGCTACCGACTATTGGACCGAGTAGGAGTACTCGGGCCATGTCTATACGTATCCGAACCCATAGGGTCACACACTTAAGGGGCTGGAAGCCCAATTCGGATCTGATCCGAGTTGGATTAGGTTTAGGAGTACTAATGGGCCTCGGATCCAGAGGCCCGTCAGGAACCCCTATAAATAGAGGGGTGGGGGCGCCCTAGGGTTTACACCTTTTGGCGAAACACTTCTGCCGCGCCTCCCACGCCCTCGCCTGTTGCAACTCGCGGATCTAGCAATCCGGCTTGCGACGCTTCCTCCCTGCACGTGTGGATACCTTGGAGGTGTTGCGCCTGCAGCACTTGGACGAGCCATCGACGAGCCGCCGACGA
1	Ensembl_Plants	SRP_RNA	32351549	32351869	.	-	.	ID=gene:ENSRNA049454461	Name=Plant_SRP	biotype=SRP_RNA	description=Plant signal recognition particle RNA	sequence=GCCGAGCTCGGTTGCGCGGGCTTGTAACCCAAGTGGGGGCATTAAGGTGGTGTGGATGTTTGGTGCGGACTTTGAGGTTAAGTCTGTGGTGTGCCCTTGCTGGCCCTGCCCATTCCAAGTTGTAATGGCTTGTGCAGCCCAAGTGAAAGCTCAGGCTTCGCTGGACCTGAAGTGGGGGCTTCGTTGGACCTGAAGTGGCATGAACAACGTGAGGCTGGCTTCACAGAGCAGCGATCACTGCCCACTTCGAACGGTGGAAAGCTAACAGGCCACTACATCACGGGTCCGACCTGGATCCCGAAGAGCCGGTGGCGAGGATTA	1	Ensembl_Plants	LTR	32351595	32351905	517	+	.	ID=13999	repeat_name=LTR_AC198290.2_10424	repeat_type=LTRs	sequence=AGTGGCCTGTTAGCTTTCCACCGTTCGAAGTGGGCAGTGATCGCTGCTCTGTGAAGCCAGCCTCACGTTGTTCATGCCACTTCAGGTCCAACGAAGCCCCCACTTCAGGTCCAGCGAAGCCTGAGCTTTCACTTGGGCTGCACAAGCCATTACAACTTGGAATGGGCAGGGCCAGCAAGGGCACACCACAGACTTAACCTCAAAGTCCGCACCAAACATCCACACCACCTTAATGCCCCCACTTGGGTTACAAGCCCGCGCAACCGAGCTCGGCGAGGATGGCTCGTGAGGACAAACATTTAAGCTGGTG
4	Ensembl_Plants	snoRNA	37979312	37979397	.	-	.	ID=gene:ENSRNA049455123	Name=snoU36a	biotype=snoRNA	description=SnoRNA U36a	sequence=TGGCAGTGATTTGACATTACCCGCGCTTCTGATCTAAACCGTGAAGCAAAGGGAAAAATAATGGTTGAATTTCTTAATATGAGCCA	4	Ensembl_Plants	LTR/Gypsy	37979290	37979342	246	+	.	ID=99	repeat_name=LTR_Sb_chr_04_496	repeat_type=LTRs	sequence=GAGAATGCGTCGAGTCATAAATGGCTCATATTAAGAAATTCAACCATTATTT
9	Ensembl_Plants	snoRNA	48493594	48493676	.	+	.	ID=gene:ENSRNA049452630	Name=snoR77Y	biotype=snoRNA	description=Small nucleolar RNA snoR77Y	sequence=AAGCCTATGAAGATTAGATTTACATATAGAATTATCGTCAGATTTACTTGTGATGACAATTGTCTGGCTTCCTGAGGCTTAAC	9	Ensembl_Plants	LTR	48493647	48493812	274	+	.	ID=87621	repeat_name=LTR_Sb_chr_08_846	repeat_type=LTRs	sequence=GACAATTGTCTGGCTTCCTGAGGCTTAACTTATTACTTACTCCCTCCATCCTGCAAAGAGTATCCTTTTAGGTTGCCCTAAGTCAAACTGTTTTAAGTTTGATCAAATTTACAATGAAGAGTATCAATATTTATAACACTAAATCTGTATGCTATGAAAATATAT
scaffold_14	Ensembl_Plants	antisense_RNA	91069	91254	.	-	.	ID=gene:ENSRNA049458105	Name=IsrR	biotype=antisense_RNA	description=Antisense RNA which regulates isiA expression	sequence=AATAACCAAATATAACACCGGGACTAAGGGTCAAATTGGTAATTTTTCTTACATCCCCCCCCCCGGGGGCCCAGGTATCATATACGCCACCAAAATAAAGAGCCTTGAGTACTAGAAGAAAAGCACCTAGACCTAACAAAATTAAGTGAATACCCAAAATGTAGTCATTTTATTTCTATCTTTCCA	scaffold_14	Ensembl_Plants	LTR	90932	91495	3189	-	.	ID=1299	repeat_name=LTR_Gr_chr_04_953	repeat_type=LTRs	sequence=ATTGAACCAGACAAAACAACAAGCGATAAAACCAAAAACGGATAAAGCAGCTAAACTATAAGACAAGTAAGCTTCGCCAGACCATACAAAGGCACGGCGAGCCCATGCAAAGGGTTTGGTTAAGATATGCCAAATTCCTCCAAGTACACAAATGGAACCCAACCATACATGTCCCCCAATTATATCTTCTAAATCATCCACACTAACAATCCATCCTTCTCCCCAAAAGGGGATTTTAGTAAATAACCAAATATAACACCGGGACTAAGGGTCAAATTGGTAATTTTTCTTACATCCCCCCCCCCGGGGGCCCAGGTATCATATACGCCACCAAAATAAAGAGCCTTGAGTACTAGAAGAAAAGCACCTAGACCTAACAAAATTAAGTGAATACCCAAAATGTAGTCATTTTATTTCTATCTTTCCATACATAACCAAAGAATGGAAAAGATTCTTCAGAGTCTCGGGTCCCAGAAGCGCGTGATAAATGCCACCGAAGCCTAAGACTGCGGAGGAATTATGTGAAGTACTCCAGATACAAAGTAAGGAAAAGTATCTAGAAC
scaffold_12	Ensembl_Plants	sense_intronic	145669	145799	.	-	.	ID=gene:ENSRNA049458504	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=GAGAGCCGTGTGATGGGTGACTATCTAGCACGGTTCAGAGAGCACGTGTATGTAGTCTGCGCTGGTGAATGGAAGCCCCCGCCGCAAAAAAGAAGCGGCTTTTCCCACGGCTCTGTCACCATTGACTCTAT	scaffold_12	Ensembl_Plants	LTR	145655	145745	793	+	.	ID=19794	repeat_name=LTR_Os_chr_11_2029	repeat_type=LTRs	sequence=ACCATAATAATAAATAGAGTCAATGGTGACAGAGCCGTGGGAAAAGCCGCTTCTTTTTTGCGGCGGGGGCTTCCATTCACCAGCGCAGAC
scaffold_12	Ensembl_Plants	sense_intronic	220509	220647	.	-	.	ID=gene:ENSRNA049458376	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=GTGAGCCGTGTGATGGGAAACCTTCCCGCACGGTTCGGAGAGCACTGAAGACGAATGAGAGGTTCACCACCACATCATTGCAAGGGGAGCTCGCTCGATTCGCAGATTGGTCTGACTCGTAATTCACTTTTGACTCCGT	scaffold_12	Ensembl_Plants	LTR	220521	220562	230	-	.	ID=1245	repeat_name=LTR_Sl_chr_03_642	repeat_type=LTRs	sequence=GGAGCTCGCTCGATTCGCAGATTGGTCTGACTCGTAATTCA
scaffold_14	Ensembl_Plants	sense_intronic	48858	48935	.	+	.	ID=gene:ENSRNA049458324	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=AGGAGCCGTATGAAGCTAAGGTTTCATGTACGGTTTTGGAATAGCGGTGGGAACTGTGATGTTATCATCGACTATGAT	scaffold_14	Ensembl_Plants	Retroelement	48742	49358	2944	-	.	ID=4726	repeat_name=RXX_Gk_DX403548.1_7560	repeat_type=Unknown	sequence=CATCTTATTGTGATAGAAATGAAGAGAAATAAATAAGCTTTAGTTAATGTAATAAAGATACCTATTACCATTTCCAAAATTCCCATTATTTTATTCATTTGGAAAATCCAAAAAAGGATATATAGGGAATAGATAAATTCCACCCGCCTAAGTATAGAACAGTTACAAATAAAGAGGAAACTAATAAATTTAGGTAAGAAACAAGATAAAATAAACCATATTTAATACCAGAATATTCGGTTTGATAACCTGCTACTAATTCTTCTTCCGCTTCTGGTAAATCAAAGGGTAATCTTTCACATTCTGCCAAAGAAGAAATTAGAAAAACTAGAAAACCTATAGGCTGACGCCAAAGATTCCACCCCAAAAAACCATATTTGGACTGTGCTTCAACTATATCAACTGTACTTGAACTGTTAGATAATCATAGTCGATGATAACATCACAGTTCCCACCGCTATTCCAAAACCGTACATGAAACCTTAGCTTCATACGGCTCCTCTATGATCAGAAAAAAAGAAAGGATTGTTTCATTTCGGTATTATTCCCTGGGCGTAGATAGAATTAGGTAAGATAAAATTGATTGGAAAGCCCCAAATTAGACCAAAGCAATTCT
scaffold_14	Ensembl_Plants	sense_intronic	70483	70558	.	+	.	ID=gene:ENSRNA049458311	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=AGGAGCCGTATGAGTGAAAATCTCATGTACGGTTCTGTAGAGGGACAGTAAGGATGACTTATCTGTCGACTTTTCC	scaffold_14	Ensembl_Plants	LTR	70086	75118	33416	-	.	ID=63949	repeat_name=LTR_Al_scaffold_0002_336	repeat_type=LTRs	sequence=AGATAGAGGAGAGCGCCAGGCGCAGATTTCCGGAATACTTCTACGGGGAATGCTCATTCAATGAGCATTCTCCATATTATGCCTTGAAGAGGACTCGAACCTCCACGCTCTTTAGCACGAGATTTTGAGTCTCGCGTGTCTACCATTTCACCATCAAGGCATCTTGAAAGTGAATCGTATTCCATGAATATGATATCTATCGAATGTGATATATGGAATATATGACAAAGGTGGAGTCTTGGAGTATTTCGATCGATCGGTCATATAGGCTGAGTCAGACATCAAATAGCTTCGATTTGCATTATCCGTAGGACACTTATATGTATCAAAATCGATATCAAAAAGATGTACAATCCAATTTGTCGATTCAATAGAAGCCCAAGAGGTGCATATGGTACCCAAATAAGGATAGGATAGATATGTCAAAAGCAGGTCTGATTACACCTATTCCTAATCCTAAATAGAATGTAAGGACGTAGGGATTTCTATGTAAACAGAGTATCCTATTTCCATAGGCTCGAATGACCCCTTCTCATAATAAGAATGTGCACGGTCTGGTCCGGTATGGAATGAACTTATAATCTGATGATCGAGTCGATTCCATGATATAAGTTCATAACCCTAGCACCCATTCCCATTTTGGGCGGAACAGATCTACTAATTCTTTTATTCCAGTTAGTAAGAGGGATCTTGAACTAAGAAATAGACCTAGCAGCTAAAAGAGGGTATCTGAGCAATTGCAAGAATGGGGTTCATTGATATTCCTGGTATAGTAGATGCTATCACACATACAGTCATACTCAATTCGATGGAATTGTTTGATCTTAAAGGGGATCTTCTATAATTTCGCACATAAGGGGTTATTTCTTGGTTTCGTCCAGTCATTAATAACTTGATTATTTTTAGATAATAGTAGATAGAAAGAACGCTCGTAAGGAGTCCTATTGAAACCAAGAAATATAGGCCTGCTTGCCATCCACACCAGAATAGATAGAGTTTTCCGAAGAAACCTGCTAGTGGAGGAAGGCCTCCTAGGGATAAGAGACATAGGGCTAAAGAGAGAGCCAAAAAGGATCTTTCGTGTATAATCCTGCATAATCTCGAATGTTATCAGTTCCGGTACGTAGACCAAATAATACAATGCAAGCAAAAGTTCCTAGATTCATGGAGATATAGAACAGCATATAAGTTATCATGCTTGCATATCCATCATTTGAGTCTCCAACAATTATTCCAATAATTACATATCCGATTGCCCTATGGACGAATATGCAAGCATACGTTTCATGCTTGTTGAGTAATAGCAAGGAGATTCCCCAATATCATGCTAAGAATAGCTAGGATTTCCAGAAGAAGATGCCATTCGTTTGATGAGAAATAAAAAGGAATATCGAGAATTCGCGTGGCTAAAGCTGAAGCAGCTACTTTCGAAGTAACAGAAAGAAAAGCAACGACTGGAGTGGGGAGTCAGAGTCGAAAAGAGGATTCCTCGCTTCTTTCTCTCATGCAAAACCGTGCATGAGACTTTCATCTCGCACGGCTCTAAGTGATAAAAGAAAGAAGAACTGGTCTTCTTTCTTTTTTGATTACCTTCCTCGCGTATGTATAAGACCGAATCCATTCTTTTTCGAAATGGATTCGAAAAAGAACTACTAATCCTTAACTTTTCGAGGAATCCTTCATCAGTGGTTGTGAATGACTGACTTTTTCAATCCTTTCGACCTTGGTTCCGTAGGAGCAAGTCAGAAAGGTTGAGAAATAGAACCATCTGATTTGATTCGTTCCCAATAGCCATGAGATGATCATCTTAGGTGATCCTTTTGTCAACGGATGCTCCTATTACACGTAGTCTCTGAAGGATGAGAACCCACTATGTAGCATCTACATCGATAATTCAAGCATGTATACGTCATTAGTCCGATTCTTTGTAGGAACTACCCGTAATAACGAGCTTGCAAATGGATCTGTTTATCATAAAGAGATTCGTTGTTCCTGACCCTGCTTCACCTTAATTGTTATTTGAACAAAAAGATCACAATAAACTTTTGGTAAAAGTTTGTCTTGGTCGGAGTGGGGATAGCATTTCTCTTCTGCATGTCTATGGAGTTTTGCAAAACCCAAACACTCAGAGATAGATATAGAGGTAGGAATTTGTCGAACGAACCACACTCCTTCGTAGACGTCAGGAGTCCATTGATGAAAAGGGGCTGGGGAAAGCTTGAACCCAAGTCCTACAGTGATGAATATAAGCGCAATTGAAATTCCTGGGGAGTTATACATTTGTGTATTGATAAGACCATTCACAATTTCTTGAAGCTCGATCTCCCCCCCAGATGAACCATATAGCCAGAGAAACCATGAACCAGAATAGAAGAGCTTGCCCCACCCATGAGTAAATATTTCATAGTAGCCTCATTAGACCGTAGATCTCTCTTGGTATATCCAGACAATAGGTAGGAACATAAACTGAAACATTCTGGAGCTACAAAGATAGTTATTAAATCGTTAGCACCACATAAAAACATTCCCCCTAGAGTAGCTGTTAATACGAATAACAGAAACTCTGTATAGCCATTTCTGTACATTCAATGTACTCTACGGATAGAGGAATACATAAAGTTGAACATAATAAAATAAGAAATTGAAAGATTTCGTTGAAATTGTTCGTTTGGAAATTTCCCGAAAAGCTAATTATAGGTTCTTCTCTCCATCGGAACAATAGGGCCGTTATGCTTATTACTAAACTTGTTGAAGAGATGAAATAGAACCAAGGTCTATCTTTTTGATCAGAGGTTAAATCGATCATCAGAAGAAGAATTAGGCCAAAAATTAGGATACATTCTGGGAAAATGAAACTTCCATTGAAGAGAAGCAAATGAAACGCTTTCATAAAAATTCTCGTAGAATCGAGAATGAAGTTTTCATTCTGTACATGCCAGATCATGAATTAGTAACTGCAGCCAATCTCCGAAAAGTCCCGATTGTTTCGATTTTGGAATGGGATATTTACGGAATCCCCATGAATAGGATCAAACCTTATTCCATGCTATTTCCATAAGATTCCTCTTTCTTATTCTTAAGCAAGCCCCCGAGAGGGCTTAGTTGATCATGATTTCTGTTTTCTCTTTCTTTTCCTTTTTATTTGTTTCGAAAAGATATCGTCCGATTCTCCTTCTATTGATTCTTTTCCGATCGAGATGTATGGATCCATGTGTCTACATACCTAGATTCTGTTCATGGATTAACGAAAATGCGCAGAGCTCTATTTGCCTCTGCCATTCTATGAGTCGCTTCCTTTTTGCGTATGGCACCCCACTCCCTTTGGCAGCATCTACTAATTCGGAACTTAATTTGAAAGCCATATTCGACCCGGACGCTTTTGGGATGCTTCTAATAACCAACGAATGGCAAGTGCTCTTCCTTGTTTAGATCCTATTTCAATCGGAACTTTCCGCGTCGATCCTTTTTTATTACGTCTTGTTTTTACTCCTATATGGGAGTTACTCTACGTATTGCTTGACGTAAAACCAATAGTGGATTTGTTTCTGTCTTTTGTTGAATCTTTTTCACGGCTCGATAGAGAATTTGATAAGCCAATGATTTTTTTCCGTCTTTCATAATACGGTTAACCACCATGTTAACTAATCGATTACGAAAAATTGGATCGGATTTGCGGTTCTTTTTTCTGCAGTACCTCGACGTGACATGAGCGTGAAAGAGGTTCAAGAATCCGTTTTCTTTTATAAGGGCTAAAAACGAATCACTTATTTTTTGGCTTTTTGACCCCATATTGTAGGGTGGATCTCGAAAGATAGGAAAGATCTCCCTCCAAGCCGTACATACGACTTTCATCGAATACGGCTTTCCACAGAATTCTATAGGGATCTATGAGATCGAGTATGGAATTCTGTTTACTCACTTTAAATTGAGTATCCGTTTCCCTCCTTTTCCCGCTAGGATCGGAAATCCTGTATTTTCCATATCCATACGATCGAGTCCTTAGGTTCCGAAATAGTGTAATGGAAAAAGAAGTGCTTCGAATCATGCTATTTGACTCGGACCTGTTCTGAAAAAGTCGAGGTATTTCGAATTGTTTGTTGACACGGACAAAGTAAGGGAAAACCTCTGAAAGAATTTCCATATTGACCTTGGACATATAAGAGTTCCGAATCGAATCTCTTTAGAAAGAAGATCTTTGTCTCATGGTAGCCTGCTCCAGTCCCCTTACGAAACTTTCGTTATTGGGTTAGCCATACACTTCACATGTTTCTAGCGATTCACATGGCATCATCAAATGATACAAGTCTTGGATAAGAATCTACAACGCACTAGAACGCCCTTGTTGACGATTCTTTACTGCGACAGCATCTAGGGTTCCTCGAATAATGCGATATCTCACACCGGGTAAATCCTTAACCCTTCCTCCTCTTACTAATACTACAGAATGTTCTTGTAAATTATGGCCAATACCAGGTATATAAGCAGTGATTCAAATCCAGAGGTTAATCGTACTCTGGCAACTTTACGTAAGGCAGAGTTGGGTTTTTTGGGGTTGATAGTGGAAAAGTCGACAGATAAGTCATCCTTACTGTCCCTCTACAGAACCGTACATGAGATTTTCACTCATACGGCTCCTCGTTCAATTATTTCGAAGGGATCCTTTTCCTCGTTCGAGAGTCTCCGCCCTTCTTCCACTCCGTCCCGAAGACTAACTAAGACCAATTGAGTCACGTTTTCATGTTCTAATTGAACACTTTCCATTTATGATTAAAGGAGAAGATTGTTCTTTTACCAAACATATGCGGATCAAATCACGTCTTATAATAAGAAGAAATCTTTCTCGGTATCAATCCCCTTGCCCCTCATTCTTGAGAATCAGAAGGATCCTTTTCGAGTTTCCATTTCTTCATTTTTCGAGTTTCCATTTCTTCATTTTGAATCTGGGCTCTTCTATCTTCGACTTCTTTTTTGGCTTTATTCTTTATTTATTTCATTTCGATTTTTCCCTCTTCCTCTATCCCTATCCTCTAGG
scaffold_14	Ensembl_Plants	sense_intronic	30642	30720	.	-	.	ID=gene:ENSRNA049458231	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=AGGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGCATGAGAGAAAGAAGCGAGGAATCCTCTTTTCGACTCTGAC	scaffold_14	Ensembl_Plants	LTR	29167	30902	12103	+	.	ID=63950	repeat_name=LTR_Al_scaffold_0002_336	repeat_type=LTRs	sequence=GATAGAGGAGAGCGCCAGGCGCAGATTTCCGGAATACTTCTACGGGGAATGCTCATTCAATGAGCATTCTCCATATTATGCCTTGAAGAGGACTCGAACCTCCACGCTCTTTAGCACGAGATTTTGAGTCTCGCGTGTCTACCATTTCACCATCAAGGCATCTTGAAAGTGAATCGTATTCCATGAATATGATATCTATCGAATGTGATATATGGAATATATGACAAAGGTGGAGTCTTGGAGTATTTCGATCGATCGGTCATATAGGCCTGAGTCAGACATCAAATAGCTTCGATTTGCATTATCCGTAGGACACCTTATATGTATCAAAATCGATATCAAAAAGATGTACAATCCAATTTGTCGATTCAATAGAAGCCCAAAGAGGTGCATATGGTACCCAAATAAGGATAGGATAGATATGTCAAAAGCAGGTCTGATTACACCTATTCCTAATCCTAAATAGAATGTAAGGACGTAGGGATTTCTATGTAAACAGAGTATCCTATTTCCATAGGCTCGAATGACCCCTTCTCATAATAAGAATGTGCACGGTCTGGTCCGGTATGGAATGAACTTATAATCTGATGATCGAGTCGATTCCATGATTATAAGTTCATAACCCTAGCACCCATTCCCATTTTGGGCGGAACAGATCTACTAATTCTTTTATTCCAGTTAGTAAGAGGGATCTTGAACTAAGAAATAGACCTAGCAGCTAAAAGAGGGTATCCTGAGCAATTGCAAGAATGGGGTTCATTGATATTCCTGGTATAGTAGATGCTATCACACATACAGTCATACTCAATTCGATGGAATTGTTTGATCTTAAAGGGGATCTTCTATAATTTCGCACATAAGGGGTTATTTCTTGGTTTCGTCCAGTCATTAATAACTTGATTATTTTTAGATAATAGTAGATAGAAAGAACGCTCGTAAGGAGTCCTATTGAAACCAAGAAATATAGGCCTGCTTGCCATCCACACCAGAATAGATAGAGTTTTCCGAAGAAACCTGCTAGTGGAGGAAGGCCTCCTAGGGATAAGAGACATAGGGCTAAAGAGAGAGCCAAAAAAGGATCTTTCGTGTATAATCCTGCATAATCTCGAATGTTATCAGTTCCGGTACGTAGACCAAATAATACAATGCAAGCAAAAGTTCCTAGATTCATGGAGATATAGAACAGCATATAAGTTATCATGCTTGCATATCCATCATTTGAGTCTCCAACAATTATTCCAATAATTACATATCCGATTTGCCCTATGGACGAATATGCAAGCATACGTTTCATGCTTGTTTGAGTAATAGCAAGGAGATTCCCCAATATCATGCTAAGAATAGCTAGGATTTCCAGAAGAAGATGCCATTCGTTTGATGAGAAATAAAAAGGAATATCGAGAATTCGCGTGGCTAAAGCTGAAGCAGCTACTTTCGAAGTAACAGAAAGAAAAGCAACGACTGGAGTGGGGGAGTCAGAGTCGAAAAGAGGATTCCTCGCTTCTTTCTCTCATGCAAAACCGTGCATGAGACTTTCATCTCGCACGGCTCCTAAGTGATAAAAGAAAGAAGAACTGGTCTTCTTTCTTTTTTGATTACCTTCCTCGCGTATGTATAAGACCGAATCCATTCTTTTTCGAAATGGATTTCGAAAAAGAACTACTAATCCTTAACTTTTCGAGGAATCCTTCATCAGTGGTTGTGAATGACTGACTTTTTCAATCCTTTCGACCTT
scaffold_14	Ensembl_Plants	sense_intronic	21091	21167	.	-	.	ID=gene:ENSRNA049458197	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=AGGAGCTGGATGAGAAGAAACTCTCATGTCCAGTTTTGCAGTAGAGATGGAACTAAGAAAGAACCGTCGACTATAAC	scaffold_14	Ensembl_Plants	LTR/Copia	21146	21184	244	-	.	ID=1311	repeat_name=LTR_Gm_16_5235	repeat_type=LTRs	sequence=TTCTCATTTAATTCGCGAGGAGCTGGATGAGAAGAAAC
scaffold_14	Ensembl_Plants	sense_intronic	125756	125835	.	-	.	ID=gene:ENSRNA049458185	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=AGAAGCCGTATGAGATGAAAACCTCATGTACGGTTTTGGAACGGAGATTTTTTGAATTGAATAGAATGAACGACCGTAAC	scaffold_14	Ensembl_Plants	LTR	114816	128706	108002	-	.	ID=36477	repeat_name=LTR_Os_chr_04_669	repeat_type=LTRs	sequence=ATCAAGCTAACTTTATCTTTATGAAATTCTAGTGTTTTTTTTACTAATTCTTTACTAATTCTAAGTAGAACTTCCAATTTCGAACTAGTTAATAACTAAGATTTATAATTAAGATCTGACATTTTAAGGATTCCCTATATATATTTCTATTTGTTACACTATTTCTGTTATGTAAGCCCACTTAGCTCAGAGGTTAGAGCATCGCATTTGTAATGCGAGGGTCATCGGTTCAAATCCGATAGTCGGCTTTTTTCTCTATCGATGTTCCATGAACAAGAATTTCTCTTTTCTCTAAATTAAATGGGGAATCGAGGGTCTATTATATCGTTCTACCTTACAATTTTGCTAGATACAAAGCATAAAAATAAATAATATATATACAAAAAATACGGATGTTGATGAAATTCGATTTTTTGTGGTACTTTTCGTAGATTTTACTCTGTTTATCCTTTAGTTTAATTCAGTTTGAATTTCGATGTATTCTGTAATGTAAATAGAATGAAATTTATTGTGTAAAAGAATTGATGAGCACTCCAAGAAATATCCTTATTTCTAGATTCATGTCTCCAGGATGATCCAAATACGCCGTCTGGGAGCTTTACCAGGACTCACTAGAAAAACGCCTAAATCCGGAAGTAATCAGAAAAAGAAATTCCATTCTGGGAAAAAAGAGCAATATCGTATTCGTCTTCAAGAAAAACAGAAATTGCGTTTTCATTATGGTCTGACAGAACGCCAATTACTAGATATGTACATATCGCTGGAAAAGCAAAAAGATCCACAGGTCAGTTTTACTACAATTACTTGAAATGCGTTTGGATAATATCCTTTTTCGATTGGGTATGGCTTCAACCATTCCTGGGGCCCGGCAATTAGTTAACCATAGACATATTTAGTTAATGGTCGTATAGTTGATATACCAAGTTTTCGTTGCAAACCCCGAGATATTATTACTACGAAGGATAACCAACGATCAAAACGTCTGGTTCAAAATTCTATTGCTTCATCCGATCCGGGCAAATTGCCAAAGCATTTGACGGTTGACACATTGCAATATAAAGGACTAGTAAAAAAAATTCTAGATAGGAAGTGGGTCGGTCTCAAAGTAAATGAGTTGTTAGTTGTAGAATATTACTCTCGCCAGACTTGAACTTAACGAAAAAAGGAAAGGTTCATAGAATTTTTTTCCCCTTCCCCTTTCCCCGAACTAAATCGACCTAAGGCTCTTAATTCGTATTTTCCCGTTCACCTAGCAGAAATAGATTAACCCTAGGTTCCTTTTTCTTTTTGTTATTTCCTCGATTTTCCATACCACAGTAATTGCTATAGAGAATTTCTATTAAATAAAGATATTATTGCTGGAATAAATTGTTATTTAATTTGATACATTGTGATTGCTAACATTGATGAATTAAGAGAAACGGAAAGAGAGGGATTCGAACCCTCGGTAAACAAAAGTCTACATAGCAGTTCCAATGCTACGCCTTGAACCGCTCGGCCATCTCTCCTCCATAATCTTATTATGGAAAATAAACTGAGTGAATAGCGAGTTTTCGTATTCCTGCAGTACAGGTACAGCCACAACGGCTGGGGGATTCCATGGCTCTATGGGAAAAATTCCTTTTCATCTAAGTGGAAGGATCCAGTATTTTTTTTTTACTAGGAATTCCGCTCCCTCGAAAAGTTTTTCTTTGGGGAAAACCAAAATAAAAAGAGAATGGAAGAATTCTTCTTATTCCATAAGAAAATAAAGGAACCCTAGAATTCTATTTGCATAAGGTACGTTACGCCATACAATCTAAATATAAAAAAGGGTATGGGGCAATTAATGACTTTGAAAACGCGAATAGCTGATGAGAGAAGTTGTTGTTTAGAAATAGGAAAGTGGAATGAAATCTAGTCTTAGTCAAATATTTCATATCTCTTCTTGTCCAAACAGAAGGAAAAGAAGACAATTTGAGCTGAGCGGAAAATCCATACCTCTCTTATCCATTTAGAGCATATGGATCGATTTATAAGAATCGAATGTTTTGTTTTTATGTTATTTTGTGATAGAATGAAAAGAATTCTATATAGAATGGGTTGGGAATTATGCCTAGATCCCGTATAAATGGAAATTTCATTGATAAGACCTCCTCGATGTAGCCAATATTTTATTGCAAATAATTCCGACAACCTCCGGGGAAAAAAGGGCATTTACTTATATAGAGATGGTGCGATTTGACTCGTTTTTTTTTAGCCCTACCTACATCTCATTCTTACGAGAAAGAGAGGGGGTTCGCATAGAGAGAACAAAATTAGTAAAGGAAACCCACGCTTGGGGAAGGTGAGGTGAACTAACAATTCCTTCTGTCGTGTATCCTCGATTGATGTGGCCTCAGATGCTTCAATTGTAGATTTGAGTATTGAGCGAAAGGTTACACCTACAGGATAGGCTCTGTATTACAGGCCAATCCGACTCTACTAGTACCAATAGGCAGCATAGGGGAGAAAAGCACTACACCTCGAAATAGGAATCAACAAGAGAAAAACTTTGTTAGAAATTAGCCCTTTCCTGATTGGTATCAGGTTGGGAAGAATGGTTAGGATAACAAACAACCATCAGTTTGTACTTTGGATACCCTTATAACCATCAAAGGTCGTTGAAGTGGCTAATTCCTCTAAATAGGAGGCGTTGAGAACAAAGAAATTCTTGGAGCTATCATTTTCCTCTAGCATTAATAGAATTCATTGGTGTTAAGAAAAACCTCTTGGGGGAAGGTTGGCTAGAGATTTCTTGGAAAAATACCAGCCCCCTTCGGTCCATAATGAGATGGAACTAATTCTATTTTTATTCTATAGATTTTTCGCTTAGTACTATGTACAGAAGGGAGAAGCCGTATGAGATGAAAACCTCATGTACGGTTTTGGAACGGAGATTTTTTGAATTGAATAGAATGAACGACCGTAACGGATGTTGGCTCAATCCGAAGGAAATTATGCGGAAGCTTTGCAGAATTATTATGAAGCTACGCGACTAGAAATTGATCCCTATGATCGAAGTTATATACTATATAACATAGGCCTTATACACACAAGCAATGGAGAGCATACAAAGGCTTTGGAATATTATTTCCGGGCGCTAGAACGAAACCCCTTCTTACCGCAAGCTTTTAATAATATGGCCGTGATCTGTCATTACGTGCGACTATCTCCACTATAGAAAGAAGAAAAAAAAAAGGAGAAAATTTTCTAGTAAATACTAGAAAAAAGGGCTTTCTACATAGGGATCGTCAAAACAACGATTTTACCCTATCAGCTGTAGGAAGGAAAGACACTTCACGAGAATCAAAATAGGAAGAAAGTAGAGCCTATACTACTATTCTATGGATAAAGCTGAAATTGATAGAGAAAACACCGTAAAGATCAATTAGTGAGCGACTGGGTCGATACAACTAAAAAAAAAACTGCTTCATTATACCACAATATGGGACAAAATTTAGGAATCCGCTTATGTAATAAAGCCGATCCACTAAGGGATTAAGCAGCGGTGTAGTATCAGATCCCAAAGATAGTAAGTTCTTTTTTCTTTGTTATGGGAAAAAGTCTTTTTCGAGGATTCTATAGAAATTTCATATATGAAAGAAACGAAACCGAGATAGTTACCTTTCAGAAAATTGGAACGAAGGATATAGGTCTATCTATGCTTCATTCTTCTGAAGGTGGGAGAAAAGATCAAACTGATTATTGATCAAAATTAGGGTTGAAACTTAGGTAATTAACTTCTTCTGCTTAACCCAAGAAGAAATTGGATTGATTTTTGAGAAATCGAATTCAGTTAATATAGGGGAAATTAAGATAGCAATTTCTGAGCCGTATGAGGTAGGAAACTCTCAAGTACGGTTCTAGGGGAAGGAACTGCCTATTCCGACCGAGGAGAACAGGCCATTCTACAGGGCGATTCGGAAATTGCGGAAGCTTGGTTTGATCAAGCTGCTGAGTATTGGAAACAAGCTATAGCGCTTACTCCGGGAAATTATATTGAAGCACAGAACTGGTTGAAGATTACGAAGCGCTTTGAATTTGAATAAAACAACTCTCCATTTCCATAAAATGGGTGGTTTGGTTGTTGATCCATTAATCAAATAATTTAGGTAAGAAGATCAAATCAAGAATTTCATTATATCCCTTTCTTCTACCTTCGATTTTATATCATATTTCATAAAGATAAATAATAGGGATAGGCTCTGGAACAGAAGTAATAAAGCACATAAAAGGTGGCAATCTAAATATTCCTACCTAATCTATCAGACGGTCTTATTAATAATTCTAATGAGTTATCTTGGAATTTGGAATCGCATAAAAAAATCTATATATGCTCACTCAAGGAAAGTAGATGTGGATAGGGGCTTATACCCTCAAAAAAAAATACACTAGCTTCTTAAATTAAAACGTAAAAAAAAAAAAAGATTTTTTTTGTTACGTCGGGAAATAATTTTCCAGAAGAACCCATGTCCGTTAGGCACCTAATCCTTATGTCATAATAGATCCGAACACTTGCCTCGGATTGACTTCAATATATAATTGCTCCAGTGAATAACTAAAAAAAATAGAAGGACGGTAGATAGTAAAGAAAAGGACTAATCATAATATCTATCTTTCAAAGATTCAATAAAAAGACAGTTGGCGGGTCTCTTTGTATGTCTTGTCCGGAAAGAGGAGGACTTAATGATTATTCGTTCGCCGGAACCAGAAGTTAAAATTGTTGTGGATAGGGATCCTGTAAAAACATCTTTTGAGGAATGGGCCAGACCCGGGCATTTCTCAAGAACAATAGCTAAGGGTCCCGATACTACCACTTGGATCTGGAACCTACATGCTGATGCTCACGATTTCGATAGTCATACCGGTGATTTGGAGGAGATCTCCCGAAAAGTCTTTAGTGCTCATTTCGGTCAACTCTCCATTATCTTTCTTTGGTTGAGTGGGATGTACTTCCACGGTGCCCGTTTTTCCAATTATGAAGCATGGCTAAGCGATCCTACTCACATTGGCCCCAGTGCTCAGGTAGTTTGGCCAATAGTAGGGCAAGAAATTTTGAATGGTGATGTAGGCGGGGGTTTCCGAGGAATCCAAATAACCTCTGGGTTTTTTCAGATTTGGCGAGCATCCGGAATAACTAGTGAATTACAACTCTATTGTACCGCATCGGTGCATTGATTTTTGCATCGTTAATGCTTTTTGCTGGTTGGTTCCATTATCACAAAGCTGCTCCCAAATTGGCCTGGTTCCAAGATGTAGAATCCATGTTGAATCACCACTAGCGGGGTTATTAGGACTTGGGTCTCTTTCTTGGGCGGGACACCAAATCCATGTATCTTTACCGATTAACCAATTTCTCGACGCTGGGGTTGATCCTAAAGAGATACCACTTCCTCATGAATTTATCTTGAATCGCGACCTTTTGGCTCAACTTTATCCTAGTTTTGCCGAAGGAGCAACTCCCTTTTTCACCTTGAATTGGTCCAAATATGCAGAATTTCTTAGTTTTCGCGGAGGACTAGATCCAATAACCGGTGGTCTATGGTTGAGCGATATTGCACACCATCATTTAGCTATGCTATTCTTTTCCTGATCGCTGGTCATATGTATAGGACCAACTGGGGTATTGGTCATGGACTTAAAGATATTTTGGAGGCTCATAAGGGCCCATTTACAGGACAAGGCCATAAGGGTCTCTATGAAATCCTAACAACGTCATGGCATGCTCAATTATCTCTTAACCTAGCTATGCTAGGCTCTACAACTATTGTTGTAGCTCATCATATGTACTCTATGCCCCCCTATCCATACCTAGCTACCGACTATGGTACACAACTTTCCTTGTTCACACACCACATGTGGATTGGCGGATTTCTAATAGTCGGTGCTGCTGCACATGCAGCCATTTTTATGGTAAGAGACTATGATCCAACTACTCGATACAACGATCTATTAGATCGCGTCCTTAGACACCGCGATGCAATCATATCCCACCTTAACTGGGTATGTATATTTCTGGGTTTTCACAGTTTTGGCTTGTACATTCATAATGATACCATGAGTGCTTTAGGCCGTCCCCAGATATGTTTTCGGATACCGCCATACAATTACAACCCATCTTTGCTCAATGGATACAAAATATCCATGCTGGCGCGCCTGGCGTAACAGCTCCTGGTGCAACAACAAGTACCAGCTTAACGTGGGGAGGCAGCGAGTTAGTAGCTGTAGGCGGCAAAGTGGCTTTGTTACCTATTCCATTAGGAACCGCAGATTTTTTAGTCCATCACATTCACGCATTTCTATCCATGTGACTGTATTAATACTTTTGAAAGGTGTTTTATTTGCTCGCAGTTCCCGTCTGATACCTGATAAAGCAAATCTTGGCTTTCGCTTCCCTTGCGACGGGCCTGGGCGAGGGGGAACATGTCAAGTATCCGCCTGGGATCATGTTTTCTTAGGTCTATTCTGGATGTATAATTCCATTTCGGTAGTTATTTTCCATTTCAGTTGGAAAATGCAGTCGGATGTTTGGGGTACTATAAGTGATCAAGGGATAGTAACTCATATCACAGGGGGAAACTTTGCACAGAGTTCCATTACGATTAATGGTTGGCTTCGAGATTTCTTGTGGGCACAGGCATCCCAAGTAATTCAGTCTTATGGTTCTTCATTATCCGCATATGGTCTTTTTTTCTTAGGCGCTCATTTTGTCTGGGCTTTCAGTTTAATGTTTTTATTCAGCGGCCGTGGTTATTGGCAAGAACTCATTGAATCTATCGTTTGGGCTCACAACAAATTAAAAGTTGCTCCTGCTACTCAGCCTAGAGCCTTGAGCATTATACAAGGACGTGCTGTAGGAGTAACCCATTACCTTCTGGGTGGAATTGCCACAACATGGGCATTCTTCTTAGCGAGAATTATTGCAGTAGGATAGTGGCTAGGAGGATTTGAAAGGCATTATGGAATTAAGATTTCCCAGGTTTAGCCAAGGCTTAGCTCAGGACCCCACTACTCGTCGTATTTGGTTTGGTATTGCTACCGCACATGATTTCGAAAGTCATGATGATATTACTGAGGAACGTCTTTATCAGAACATTTTTGCTTCTCACTTTGGGCAGTTAGCAATAATCTTTCTATGGACGTCTGGAAATCTGTTTCATGTAGCTGGCAAGGAAATTTTGAATCATGGATACAGGATCCTTTACACGTAAGACCTATTGCTCATGCCATTTGGGATCCTCATTTTGGGCAACCCGCGGTGGAAGCCTTTACTCGAGGAGGTGCTGCCGGTCCAGTGAATATTGCTTATTCTGGGGTTTATCAGTGGTGGTATACAATTGGATTGCGCACCAATGAAGATCTTTATACTGGAGCTCTTTTTCTATTATTTCTTTCTACGCTATCCTTAATAGGGGGTTGGTTACATCTACAACCCAAATGGAAGCCAAGCCTTTCGTGGTTCAAAAATGCGGAATCTCGTCTCAATCATCATTTGTCAGACTTTTCGGGGTAAGTTCTTTGGCTTGGACAGGACATTTAGTTCATGTTGCTATTCCCGCATCCAGGGGGGAGTACGTTCGATGGAATAATTTCTTAGATGTATTACCCTATCCCCAGGGGTTGGGTCCCCTTCTGACGGGTCAGTGGAATCTTTATGCCCAAAATCCTGATTCGAGTAATCATTTATTTGGTACCACTCAAGGAGCGGGAACTGCCATTCTGACCCTTCTTGGGGGATTCCATCCACAAACACAAAGTTTGTGGCTGACCGATATTGCTCATCATCATTTAGCTATTGCATTTATTTTTCTCATTGCCGGTCATATGTATCGAACTAACTTCGGAATTGGGCACAGTATCAAAGATCTTTAGAAGCACATACTCCTCCGGGGGGTCGATTAGGACGTGGGCATAAAGGCCTTATGATACAATTAATAATTCGATTCATTTTCAATTAGGTCTTGCTCTAGCTTCCTTAGGGGTTATTACTTCCTTAGTAGCTCAACATATGTACTCTTTACCTGCTTATGCATTCATAGCACAAGACTTTACTACTCAAGCTGCTTTATATACTCATCACCAATACATTGCAGGGTTCATCATGACAGGGGCTTTTGCTCATGGAGCTATTTTTTTCATTAGGGATTACAATCCGGAACAGAATGAAGATAATGTATTGGCAAGAATGTTAGACCATAAAGAAGCTATCATATCTCATTTAAGTTGGGCTAGCCTCTTCCTAGGATTCCATACCTTAGGCCTTTATGTTCATAACGACGTCATGCTTGCTTTTGGTACTCCAGAAAAGCAAATCTTGATCGAACCTATATTTGCCCAATGGATACAATCTGCTCATGGTAAGACGACATATGGGTTCGATATACTCTTATCTTCAACGAATGGCCCCGCTTTCAATGCAGTCGAAGCATATGGTTGCCCGGATGGTTGAATGCTGTTAATGAGAATAGTAATTCGCTTTTCTTAACAATAGGACCCGGAGATTTCTTGGTTCATCATGCTATTGCTCTAGGTTTGCATACAACTACATTGATTTTAGTAAAGGGTGCTTAGATGCACGCGGTTCCAAATTAATGCCGGATAAAAAGGATTTCGGATATAGTTTTCCTTGCGACGGCCCAGGGCGCGGTGGTACTTGTGATATTTCTGCTTGGGACGCGTTTTATTTGGCAGTTTCTGGATGTTAAATACCATTGGATGGGTTACTTTTTATTGGCATTGGAAACACATCACATTATGGCAGGGCAACGTTTCACAATTTAATGAATCCTCCACTTATTTGATGGGATGGTTAAGAGATTACCTATGGTTAAACTCTTCACAACTTATCAATGGATATAATCCTTTTGGGATGAATAGTTTATCAGTATGGGCTTGGATGTTCTTATTTGGACATCTTGTTTGGGCTACTGGATTTATGTTCTTAATTTCCTGGCGTGGATATTGGCAGGAATTAATTGAGACTTTAGCATGGGCCCATGAACGCACACCTTTGGCTAATTTAATTCGCTGGAGAGATAAGCCCGTGGCTCTTCCATTGTGCAAGCAAGATTGGTTGGATTAGCCCACTTTTCCGTGGGTTATATATTCACTTATGCAGCTTTCTTGATTGCCTCAACATCAGGCAAGTTTGGTTAATTTAGTTATTTTTTTTTTGTTTTTTTGTACTGTATCAGAACCTAGTTCATTACTCTTGATGGAGAGGGAGGATCCGCCTTTTTAGATTTTTTTTCTATTTATTTTTCCATCTAGGATTAGAACCATATACTTGGTAATAATAGGAACGGCACATTATGGCAAAAAAAAGTTGATTCAGAGGGAGAAGAAGCGGCAGAAATTAGAAAAAAAATATCATTTGATTCGTGGATCCTCAAAAAAAAAGATAAGAAGCAAAGTTTCCCCTTTGAGTTTGAGCGAAAAAAAAAAAATGCAAGAAAAATTGCAATCCCTACCACGTAATAGTGCACCTACACGCCTTCATCGACGTTGTTTTTTAACCGGAAGACCTAGAGCTAACTATCGAGACTTTGGGCTATCCGGACACATACTTCGAGAAATGGTTTATGCATGTTTGTTACCGGGTGCAACAAGATCCAGTTGGTAAGGATAAAATACCCTTTCATATTTGTATGGTTTTCTCGAATTGATGATCGTAGAAGAGCCCTCTTTACCATTCTGTATAAATGGACTATTCTATTTATATAGATATGGTAGAGGGGCGTATCCAATCCCCTTTTATCCACAAGTTCCCCGCTCTTTAGTTTAAGAAGGTAGAGCAGTTTGGTAGCTCACAAAGCTCATAACCTTGGGGTTACGGGTTCGATACTCACTACCCGCTCCATATTCCTTCTTTATGATATATGTATCATCCATTTGTATATGGTATATGGATTTTTTTTCTTTCCTAAAAGAGTTTCGGTCTAACAGTTTTTTATTTTTTCTCTTGTTCCGAGAAAAAAGTAAAAGAAAGAAAAAAATACGAAAGAAAAGCGTCCATTGTCTAATGGATAGGACAGAGGTCTTCTAAACCTTTGGTATAGGTTCAAATCCTATTGGACGCAATCTTTTTTCTATCTATTCTTTAAATAACTATACTAAATACTAAGAAAACTTTTTTGCATGATTCAAATGAAAAATCTTTCTCAATGATTCCTCTTCTACTAACACGAGTTCTACTAATAAGAGTAGACATGCTATATTTATGTTTGTTCCTGAAGGGAAAACCGTTCAAGCTGTTCCTGAATAGCTTCCTTCAAAAGGGTTTCTGCTTGCTCGGTGAATGTCTTGCTAGAAGATATAATTTCTTGGAATTGAGGTTTAGTATCTTTAGGTGTTTACGTAACTCATCCAGAAATTTCTTTACCTGTTCATTTCTAACGAATCAAGATATCCTCTCGTTCCGGTATAAATGGTAGCTACTTGCTCTTCCACTGGGAGAGGGTTTGATTGGGATTGTTTAAGCAATTCCCGTAATCGTCGACCCCTTGCCAATTGATTCTGACTTGTTTTATCGAGAGCAGAGGCGAATTGTGCAAAGGCTTGTAACTCCGCGAATTGAGCTAATTCCAATTTTGATTTGCCAGCTACTTGTTTCATGGCTTTAATTGAGCTGCGGATCCTACTCTGGAAACAGAAATACCCACATTAATAGCAGGTCGAATTCCGGCATTGAATAGATCCGCGGATAAGAATATTTGTCCATCTGTAATTGAGATTACATTAGTAGGAATATAGGCGGAAACGTCTCCAGATTGAGTCTCCACTATTGGTAAAGCGGTCATACTCCCTTCGCCTAAAAGAGAATTTAATTTAGCGGCTCTTTCTAAAAGGCGTGAATGCAAATAAAAAACATCCCCTGGATAAGCTTCGCGGCCGGGGGGTCTTCTTAATAGAAGGGACATTTGGCGATAAGCTTGTGCCTGTTTGGAGAGATCATCATAAATTATTAAAGTATGCCGTTCGCGGTACATAAAATACTCAGCCAGGGCTGCTCCCGTATAAGGAGCGAGATATTGTAATGTAGCGGGTGAATCCGCCATTCAGCTACTACAATAGTGTATTCCATGGCCCCCTCTTCGTGGAAAGTAGTTACTACTTGAGCCACGGAGGATGCTCTTTGACCGATAGCTACATAAACACATATTACATCTTGCCCTTTTTGATTGAGAATTGTATCTGTGGCTACTGCTGTTTTGCCAGTCTGTCTGTCCCCAATAATTAACTCTCGCTGACCGCGCCCTATGGGGATCATCGAATCGATAGCAATAAGCCCTGTTTGAAGGGGTTCATATACGGAACGCCTAGAAATTATACCCGGAGCAGGAGATTCAATTAAGCGAGATTCCGAAGCGACAATTTCGCCTCTCCCATCAATAGGTTTAGCGAGAGCATTTATAACACGACCCAAGTAAGCCTCGCTCACGGGTATCTGAGCAATTCTTCCTGTTGCTTTTACAAAACTTCCCTCTTGTATCATCAACCCATCGCCCATTAATACAATTCCAACATTTTTGGATTCCAAATTCAGAGCAATACCTCTCGTCCCTTCCGCAAATTCGACTAATTCACCTGACATTATTTCACCAAGACCTATAATACGAGCAATCCCATCCCCCACTTGAACTACGCGACCGATATTCTCAATCCCTACTTTCCTATTATATTGTTCAATACGTTCGCGGAGAATTTTATTAATTTCGTCGACTCGAAGGGTTGCCATTAGTGTTTCTTGAATCTTTTTTTTTTTCGGAAGCAAGGGGAAAAATAATGCCTAAATTCTAAACGAAAGTAGAAGTTCAAAACCTAATAAATTTCATTATCTCTTCCATTCTATGGCCCCGAGAATGCCAATATTAGCACGAATCGTACGGAAATGTAACTCGGTATTCAAACAACTATTCAGAGTTCCTAGAGCTCCTTGTACGGCTTGTTGGAAAACCCGTTGTCGAACCTGATTCATCGCCCTTTGTTTTTCAAATAAAGGGTTTCGTTTTTAGACTTTTCTAATTGTTCCAAACTAATAGAAGTAGCATTAATCAAATTTGCTTTTTCTCGTTCTATTTCAGAGTATCCATTCATTCGATACTCATCTGCTTCTAGTTCGACTTTCTGTAATCGAATCCGAGCTTTTTCGAGTTGTTCAAGGGTCCCTCTACGCAATTCTTCCGAATTTCGAATAGTACTTAAGATCCTCTGTTTTCGATTATCTAATAAATCTTTTAATGAAAGTAGATTATCTTGCTATTAAGTTTACAATTTTTATGATCTCTTCCCGAACCAAACATGAATCTTTCGATTCATTTGGCTCTCCCGCTCCTTTTTTTCTCTTTTGCTATGTATTTTTTTCTCTTTGCTATGTATTATGGCTATTTCCATATCTTTTTTTTATGTAATGAGCCTATCCTCTCTTTCTGTTTGTATTTCTATATACCCAAACTTATATAAGACTAGATGAATATTAAGATAAGAGGATTCTTCCAACTAGATAAAAATCTATCATGGTCAGCAAAGTTGTTTCTTTATTTGTGTTTGCTCTGTTAGTTAATAATTTCAATTTCATTAAGAAAAACAAACTAAATAAATGGAAAATCTAAATTGATACAATTCCTTTTATTTTTTCTTCAAATCCAAAAAATTTCTCTTTTATACATAGGTCGTCGATTCGGCATTGGAAAAAGGGCTGGATGCCCTTCTAGTAAATAGTTCAAACTATTTTATCGATATGAGTGTTCTATATCAGATAAATTCCACACTAGCTATTCCCGTTTAAAGCATTTCGAGACTAATGTAGTTGTAGAAAGAGTACCCCTTTTGCCCGGACTTCAAGCAGTTTAGCTTTAACCGTGTTAATGGTCTCACATTATTGGTCTATAGAGAATCAAAGTAAATTTACCAATGAGTCGCGAAATGCTATGGTTCTTCCATATGATTTCTGAAGTTATTCAGAAGTAATTCGTCGAGATCGTGCACCTTTTCTTATTTATCCAAAAAAATACTAAAAAATATTCTAAAGTGCAGCCGGATAGATCCAATCTATTCTTGAAATAGACAACTCGCACACACTCCCTTTCCAAAAAAAATCAATACACCAACCACTACAGTTAGATTTATTAGATTTGTTGCTAAAATATCGGTATTAAGCCCGAAACTCCCAGCGAATGGCCTGTGAGCTAAAAAAACGAAAGAATAGGTTACATTTTTCATATGCTCTCCTCTATAGATAGGACGAACAAAGAAGAAAGTTTTTCGATCACTTACTTCGCTCGCCCTTTTTTGATCGGTTTTTTTAATGCAATCTTTTTTTAATGCAAATAGATTTAATCTAATAATTTCTTTTAGATTAAGTCTTAGGTCTTGTTTGACCTGTAAAAAATCTCCTTTGTTGAAATGTTCCCAAAATTCCTAAAATAAAAGAAAAAGAGTTTCCACTGTCCTAAACTAAGAATGGGAAGGAAGAGGACGAGCGTATCCTCTAAATTGATCATGCTCAAATCAGCCCTTCCTGGGGTTCCTGGGGTATTGTCTGTCCCGATAAATACAAAATTCCCGGAATAATATAATAAATAGGAGTAAAGTATTGATATACTTGGAATTACAGAAGCAAATCCCAATGTACGAAAAAAAAGAAAAAAGTATCTAATCTAAAGGACTCTTTTTCTTTTTTAGGATTAAACAAAAGGGTTCGCAAATAAAAGCGCTAGTGCCACAACCAGTCCATAAATTGTTAAAGCTTCCATAAAAGCTAGACTAAGCAATAAAGTACCTCGTATTTTACCTTCTGCTTCTGGCTGTCTCGCAATACCTTCTACAGCTTGTCCTGCAGCAGTACCTTGACCAACTCCGGGCCCAATA
scaffold_14	Ensembl_Plants	sense_intronic	73574	73652	.	+	.	ID=gene:ENSRNA049458159	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=TAGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGCATGAGAGAAAGAAGCGAGGAATCCTCTTTTCGACTCTGAC	scaffold_14	Ensembl_Plants	LTR	70086	75118	33416	-	.	ID=63949	repeat_name=LTR_Al_scaffold_0002_336	repeat_type=LTRs	sequence=AGATAGAGGAGAGCGCCAGGCGCAGATTTCCGGAATACTTCTACGGGGAATGCTCATTCAATGAGCATTCTCCATATTATGCCTTGAAGAGGACTCGAACCTCCACGCTCTTTAGCACGAGATTTTGAGTCTCGCGTGTCTACCATTTCACCATCAAGGCATCTTGAAAGTGAATCGTATTCCATGAATATGATATCTATCGAATGTGATATATGGAATATATGACAAAGGTGGAGTCTTGGAGTATTTCGATCGATCGGTCATATAGGCTGAGTCAGACATCAAATAGCTTCGATTTGCATTATCCGTAGGACACTTATATGTATCAAAATCGATATCAAAAAGATGTACAATCCAATTTGTCGATTCAATAGAAGCCCAAGAGGTGCATATGGTACCCAAATAAGGATAGGATAGATATGTCAAAAGCAGGTCTGATTACACCTATTCCTAATCCTAAATAGAATGTAAGGACGTAGGGATTTCTATGTAAACAGAGTATCCTATTTCCATAGGCTCGAATGACCCCTTCTCATAATAAGAATGTGCACGGTCTGGTCCGGTATGGAATGAACTTATAATCTGATGATCGAGTCGATTCCATGATATAAGTTCATAACCCTAGCACCCATTCCCATTTTGGGCGGAACAGATCTACTAATTCTTTTATTCCAGTTAGTAAGAGGGATCTTGAACTAAGAAATAGACCTAGCAGCTAAAAGAGGGTATCTGAGCAATTGCAAGAATGGGGTTCATTGATATTCCTGGTATAGTAGATGCTATCACACATACAGTCATACTCAATTCGATGGAATTGTTTGATCTTAAAGGGGATCTTCTATAATTTCGCACATAAGGGGTTATTTCTTGGTTTCGTCCAGTCATTAATAACTTGATTATTTTTAGATAATAGTAGATAGAAAGAACGCTCGTAAGGAGTCCTATTGAAACCAAGAAATATAGGCCTGCTTGCCATCCACACCAGAATAGATAGAGTTTTCCGAAGAAACCTGCTAGTGGAGGAAGGCCTCCTAGGGATAAGAGACATAGGGCTAAAGAGAGAGCCAAAAAGGATCTTTCGTGTATAATCCTGCATAATCTCGAATGTTATCAGTTCCGGTACGTAGACCAAATAATACAATGCAAGCAAAAGTTCCTAGATTCATGGAGATATAGAACAGCATATAAGTTATCATGCTTGCATATCCATCATTTGAGTCTCCAACAATTATTCCAATAATTACATATCCGATTGCCCTATGGACGAATATGCAAGCATACGTTTCATGCTTGTTGAGTAATAGCAAGGAGATTCCCCAATATCATGCTAAGAATAGCTAGGATTTCCAGAAGAAGATGCCATTCGTTTGATGAGAAATAAAAAGGAATATCGAGAATTCGCGTGGCTAAAGCTGAAGCAGCTACTTTCGAAGTAACAGAAAGAAAAGCAACGACTGGAGTGGGGAGTCAGAGTCGAAAAGAGGATTCCTCGCTTCTTTCTCTCATGCAAAACCGTGCATGAGACTTTCATCTCGCACGGCTCTAAGTGATAAAAGAAAGAAGAACTGGTCTTCTTTCTTTTTTGATTACCTTCCTCGCGTATGTATAAGACCGAATCCATTCTTTTTCGAAATGGATTCGAAAAAGAACTACTAATCCTTAACTTTTCGAGGAATCCTTCATCAGTGGTTGTGAATGACTGACTTTTTCAATCCTTTCGACCTTGGTTCCGTAGGAGCAAGTCAGAAAGGTTGAGAAATAGAACCATCTGATTTGATTCGTTCCCAATAGCCATGAGATGATCATCTTAGGTGATCCTTTTGTCAACGGATGCTCCTATTACACGTAGTCTCTGAAGGATGAGAACCCACTATGTAGCATCTACATCGATAATTCAAGCATGTATACGTCATTAGTCCGATTCTTTGTAGGAACTACCCGTAATAACGAGCTTGCAAATGGATCTGTTTATCATAAAGAGATTCGTTGTTCCTGACCCTGCTTCACCTTAATTGTTATTTGAACAAAAAGATCACAATAAACTTTTGGTAAAAGTTTGTCTTGGTCGGAGTGGGGATAGCATTTCTCTTCTGCATGTCTATGGAGTTTTGCAAAACCCAAACACTCAGAGATAGATATAGAGGTAGGAATTTGTCGAACGAACCACACTCCTTCGTAGACGTCAGGAGTCCATTGATGAAAAGGGGCTGGGGAAAGCTTGAACCCAAGTCCTACAGTGATGAATATAAGCGCAATTGAAATTCCTGGGGAGTTATACATTTGTGTATTGATAAGACCATTCACAATTTCTTGAAGCTCGATCTCCCCCCCAGATGAACCATATAGCCAGAGAAACCATGAACCAGAATAGAAGAGCTTGCCCCACCCATGAGTAAATATTTCATAGTAGCCTCATTAGACCGTAGATCTCTCTTGGTATATCCAGACAATAGGTAGGAACATAAACTGAAACATTCTGGAGCTACAAAGATAGTTATTAAATCGTTAGCACCACATAAAAACATTCCCCCTAGAGTAGCTGTTAATACGAATAACAGAAACTCTGTATAGCCATTTCTGTACATTCAATGTACTCTACGGATAGAGGAATACATAAAGTTGAACATAATAAAATAAGAAATTGAAAGATTTCGTTGAAATTGTTCGTTTGGAAATTTCCCGAAAAGCTAATTATAGGTTCTTCTCTCCATCGGAACAATAGGGCCGTTATGCTTATTACTAAACTTGTTGAAGAGATGAAATAGAACCAAGGTCTATCTTTTTGATCAGAGGTTAAATCGATCATCAGAAGAAGAATTAGGCCAAAAATTAGGATACATTCTGGGAAAATGAAACTTCCATTGAAGAGAAGCAAATGAAACGCTTTCATAAAAATTCTCGTAGAATCGAGAATGAAGTTTTCATTCTGTACATGCCAGATCATGAATTAGTAACTGCAGCCAATCTCCGAAAAGTCCCGATTGTTTCGATTTTGGAATGGGATATTTACGGAATCCCCATGAATAGGATCAAACCTTATTCCATGCTATTTCCATAAGATTCCTCTTTCTTATTCTTAAGCAAGCCCCCGAGAGGGCTTAGTTGATCATGATTTCTGTTTTCTCTTTCTTTTCCTTTTTATTTGTTTCGAAAAGATATCGTCCGATTCTCCTTCTATTGATTCTTTTCCGATCGAGATGTATGGATCCATGTGTCTACATACCTAGATTCTGTTCATGGATTAACGAAAATGCGCAGAGCTCTATTTGCCTCTGCCATTCTATGAGTCGCTTCCTTTTTGCGTATGGCACCCCACTCCCTTTGGCAGCATCTACTAATTCGGAACTTAATTTGAAAGCCATATTCGACCCGGACGCTTTTGGGATGCTTCTAATAACCAACGAATGGCAAGTGCTCTTCCTTGTTTAGATCCTATTTCAATCGGAACTTTCCGCGTCGATCCTTTTTTATTACGTCTTGTTTTTACTCCTATATGGGAGTTACTCTACGTATTGCTTGACGTAAAACCAATAGTGGATTTGTTTCTGTCTTTTGTTGAATCTTTTTCACGGCTCGATAGAGAATTTGATAAGCCAATGATTTTTTTCCGTCTTTCATAATACGGTTAACCACCATGTTAACTAATCGATTACGAAAAATTGGATCGGATTTGCGGTTCTTTTTTCTGCAGTACCTCGACGTGACATGAGCGTGAAAGAGGTTCAAGAATCCGTTTTCTTTTATAAGGGCTAAAAACGAATCACTTATTTTTTGGCTTTTTGACCCCATATTGTAGGGTGGATCTCGAAAGATAGGAAAGATCTCCCTCCAAGCCGTACATACGACTTTCATCGAATACGGCTTTCCACAGAATTCTATAGGGATCTATGAGATCGAGTATGGAATTCTGTTTACTCACTTTAAATTGAGTATCCGTTTCCCTCCTTTTCCCGCTAGGATCGGAAATCCTGTATTTTCCATATCCATACGATCGAGTCCTTAGGTTCCGAAATAGTGTAATGGAAAAAGAAGTGCTTCGAATCATGCTATTTGACTCGGACCTGTTCTGAAAAAGTCGAGGTATTTCGAATTGTTTGTTGACACGGACAAAGTAAGGGAAAACCTCTGAAAGAATTTCCATATTGACCTTGGACATATAAGAGTTCCGAATCGAATCTCTTTAGAAAGAAGATCTTTGTCTCATGGTAGCCTGCTCCAGTCCCCTTACGAAACTTTCGTTATTGGGTTAGCCATACACTTCACATGTTTCTAGCGATTCACATGGCATCATCAAATGATACAAGTCTTGGATAAGAATCTACAACGCACTAGAACGCCCTTGTTGACGATTCTTTACTGCGACAGCATCTAGGGTTCCTCGAATAATGCGATATCTCACACCGGGTAAATCCTTAACCCTTCCTCCTCTTACTAATACTACAGAATGTTCTTGTAAATTATGGCCAATACCAGGTATATAAGCAGTGATTCAAATCCAGAGGTTAATCGTACTCTGGCAACTTTACGTAAGGCAGAGTTGGGTTTTTTGGGGTTGATAGTGGAAAAGTCGACAGATAAGTCATCCTTACTGTCCCTCTACAGAACCGTACATGAGATTTTCACTCATACGGCTCCTCGTTCAATTATTTCGAAGGGATCCTTTTCCTCGTTCGAGAGTCTCCGCCCTTCTTCCACTCCGTCCCGAAGACTAACTAAGACCAATTGAGTCACGTTTTCATGTTCTAATTGAACACTTTCCATTTATGATTAAAGGAGAAGATTGTTCTTTTACCAAACATATGCGGATCAAATCACGTCTTATAATAAGAAGAAATCTTTCTCGGTATCAATCCCCTTGCCCCTCATTCTTGAGAATCAGAAGGATCCTTTTCGAGTTTCCATTTCTTCATTTTTCGAGTTTCCATTTCTTCATTTTGAATCTGGGCTCTTCTATCTTCGACTTCTTTTTTGGCTTTATTCTTTATTTATTTCATTTCGATTTTTCCCTCTTCCTCTATCCCTATCCTCTAGG
scaffold_14	Ensembl_Plants	sense_intronic	71253	71326	.	+	.	ID=gene:ENSRNA049458140	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=GAAAGCCGTATTCGATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCCTATCTTTCGAGATCCACCCTAC	scaffold_14	Ensembl_Plants	LTR	70086	75118	33416	-	.	ID=63949	repeat_name=LTR_Al_scaffold_0002_336	repeat_type=LTRs	sequence=AGATAGAGGAGAGCGCCAGGCGCAGATTTCCGGAATACTTCTACGGGGAATGCTCATTCAATGAGCATTCTCCATATTATGCCTTGAAGAGGACTCGAACCTCCACGCTCTTTAGCACGAGATTTTGAGTCTCGCGTGTCTACCATTTCACCATCAAGGCATCTTGAAAGTGAATCGTATTCCATGAATATGATATCTATCGAATGTGATATATGGAATATATGACAAAGGTGGAGTCTTGGAGTATTTCGATCGATCGGTCATATAGGCTGAGTCAGACATCAAATAGCTTCGATTTGCATTATCCGTAGGACACTTATATGTATCAAAATCGATATCAAAAAGATGTACAATCCAATTTGTCGATTCAATAGAAGCCCAAGAGGTGCATATGGTACCCAAATAAGGATAGGATAGATATGTCAAAAGCAGGTCTGATTACACCTATTCCTAATCCTAAATAGAATGTAAGGACGTAGGGATTTCTATGTAAACAGAGTATCCTATTTCCATAGGCTCGAATGACCCCTTCTCATAATAAGAATGTGCACGGTCTGGTCCGGTATGGAATGAACTTATAATCTGATGATCGAGTCGATTCCATGATATAAGTTCATAACCCTAGCACCCATTCCCATTTTGGGCGGAACAGATCTACTAATTCTTTTATTCCAGTTAGTAAGAGGGATCTTGAACTAAGAAATAGACCTAGCAGCTAAAAGAGGGTATCTGAGCAATTGCAAGAATGGGGTTCATTGATATTCCTGGTATAGTAGATGCTATCACACATACAGTCATACTCAATTCGATGGAATTGTTTGATCTTAAAGGGGATCTTCTATAATTTCGCACATAAGGGGTTATTTCTTGGTTTCGTCCAGTCATTAATAACTTGATTATTTTTAGATAATAGTAGATAGAAAGAACGCTCGTAAGGAGTCCTATTGAAACCAAGAAATATAGGCCTGCTTGCCATCCACACCAGAATAGATAGAGTTTTCCGAAGAAACCTGCTAGTGGAGGAAGGCCTCCTAGGGATAAGAGACATAGGGCTAAAGAGAGAGCCAAAAAGGATCTTTCGTGTATAATCCTGCATAATCTCGAATGTTATCAGTTCCGGTACGTAGACCAAATAATACAATGCAAGCAAAAGTTCCTAGATTCATGGAGATATAGAACAGCATATAAGTTATCATGCTTGCATATCCATCATTTGAGTCTCCAACAATTATTCCAATAATTACATATCCGATTGCCCTATGGACGAATATGCAAGCATACGTTTCATGCTTGTTGAGTAATAGCAAGGAGATTCCCCAATATCATGCTAAGAATAGCTAGGATTTCCAGAAGAAGATGCCATTCGTTTGATGAGAAATAAAAAGGAATATCGAGAATTCGCGTGGCTAAAGCTGAAGCAGCTACTTTCGAAGTAACAGAAAGAAAAGCAACGACTGGAGTGGGGAGTCAGAGTCGAAAAGAGGATTCCTCGCTTCTTTCTCTCATGCAAAACCGTGCATGAGACTTTCATCTCGCACGGCTCTAAGTGATAAAAGAAAGAAGAACTGGTCTTCTTTCTTTTTTGATTACCTTCCTCGCGTATGTATAAGACCGAATCCATTCTTTTTCGAAATGGATTCGAAAAAGAACTACTAATCCTTAACTTTTCGAGGAATCCTTCATCAGTGGTTGTGAATGACTGACTTTTTCAATCCTTTCGACCTTGGTTCCGTAGGAGCAAGTCAGAAAGGTTGAGAAATAGAACCATCTGATTTGATTCGTTCCCAATAGCCATGAGATGATCATCTTAGGTGATCCTTTTGTCAACGGATGCTCCTATTACACGTAGTCTCTGAAGGATGAGAACCCACTATGTAGCATCTACATCGATAATTCAAGCATGTATACGTCATTAGTCCGATTCTTTGTAGGAACTACCCGTAATAACGAGCTTGCAAATGGATCTGTTTATCATAAAGAGATTCGTTGTTCCTGACCCTGCTTCACCTTAATTGTTATTTGAACAAAAAGATCACAATAAACTTTTGGTAAAAGTTTGTCTTGGTCGGAGTGGGGATAGCATTTCTCTTCTGCATGTCTATGGAGTTTTGCAAAACCCAAACACTCAGAGATAGATATAGAGGTAGGAATTTGTCGAACGAACCACACTCCTTCGTAGACGTCAGGAGTCCATTGATGAAAAGGGGCTGGGGAAAGCTTGAACCCAAGTCCTACAGTGATGAATATAAGCGCAATTGAAATTCCTGGGGAGTTATACATTTGTGTATTGATAAGACCATTCACAATTTCTTGAAGCTCGATCTCCCCCCCAGATGAACCATATAGCCAGAGAAACCATGAACCAGAATAGAAGAGCTTGCCCCACCCATGAGTAAATATTTCATAGTAGCCTCATTAGACCGTAGATCTCTCTTGGTATATCCAGACAATAGGTAGGAACATAAACTGAAACATTCTGGAGCTACAAAGATAGTTATTAAATCGTTAGCACCACATAAAAACATTCCCCCTAGAGTAGCTGTTAATACGAATAACAGAAACTCTGTATAGCCATTTCTGTACATTCAATGTACTCTACGGATAGAGGAATACATAAAGTTGAACATAATAAAATAAGAAATTGAAAGATTTCGTTGAAATTGTTCGTTTGGAAATTTCCCGAAAAGCTAATTATAGGTTCTTCTCTCCATCGGAACAATAGGGCCGTTATGCTTATTACTAAACTTGTTGAAGAGATGAAATAGAACCAAGGTCTATCTTTTTGATCAGAGGTTAAATCGATCATCAGAAGAAGAATTAGGCCAAAAATTAGGATACATTCTGGGAAAATGAAACTTCCATTGAAGAGAAGCAAATGAAACGCTTTCATAAAAATTCTCGTAGAATCGAGAATGAAGTTTTCATTCTGTACATGCCAGATCATGAATTAGTAACTGCAGCCAATCTCCGAAAAGTCCCGATTGTTTCGATTTTGGAATGGGATATTTACGGAATCCCCATGAATAGGATCAAACCTTATTCCATGCTATTTCCATAAGATTCCTCTTTCTTATTCTTAAGCAAGCCCCCGAGAGGGCTTAGTTGATCATGATTTCTGTTTTCTCTTTCTTTTCCTTTTTATTTGTTTCGAAAAGATATCGTCCGATTCTCCTTCTATTGATTCTTTTCCGATCGAGATGTATGGATCCATGTGTCTACATACCTAGATTCTGTTCATGGATTAACGAAAATGCGCAGAGCTCTATTTGCCTCTGCCATTCTATGAGTCGCTTCCTTTTTGCGTATGGCACCCCACTCCCTTTGGCAGCATCTACTAATTCGGAACTTAATTTGAAAGCCATATTCGACCCGGACGCTTTTGGGATGCTTCTAATAACCAACGAATGGCAAGTGCTCTTCCTTGTTTAGATCCTATTTCAATCGGAACTTTCCGCGTCGATCCTTTTTTATTACGTCTTGTTTTTACTCCTATATGGGAGTTACTCTACGTATTGCTTGACGTAAAACCAATAGTGGATTTGTTTCTGTCTTTTGTTGAATCTTTTTCACGGCTCGATAGAGAATTTGATAAGCCAATGATTTTTTTCCGTCTTTCATAATACGGTTAACCACCATGTTAACTAATCGATTACGAAAAATTGGATCGGATTTGCGGTTCTTTTTTCTGCAGTACCTCGACGTGACATGAGCGTGAAAGAGGTTCAAGAATCCGTTTTCTTTTATAAGGGCTAAAAACGAATCACTTATTTTTTGGCTTTTTGACCCCATATTGTAGGGTGGATCTCGAAAGATAGGAAAGATCTCCCTCCAAGCCGTACATACGACTTTCATCGAATACGGCTTTCCACAGAATTCTATAGGGATCTATGAGATCGAGTATGGAATTCTGTTTACTCACTTTAAATTGAGTATCCGTTTCCCTCCTTTTCCCGCTAGGATCGGAAATCCTGTATTTTCCATATCCATACGATCGAGTCCTTAGGTTCCGAAATAGTGTAATGGAAAAAGAAGTGCTTCGAATCATGCTATTTGACTCGGACCTGTTCTGAAAAAGTCGAGGTATTTCGAATTGTTTGTTGACACGGACAAAGTAAGGGAAAACCTCTGAAAGAATTTCCATATTGACCTTGGACATATAAGAGTTCCGAATCGAATCTCTTTAGAAAGAAGATCTTTGTCTCATGGTAGCCTGCTCCAGTCCCCTTACGAAACTTTCGTTATTGGGTTAGCCATACACTTCACATGTTTCTAGCGATTCACATGGCATCATCAAATGATACAAGTCTTGGATAAGAATCTACAACGCACTAGAACGCCCTTGTTGACGATTCTTTACTGCGACAGCATCTAGGGTTCCTCGAATAATGCGATATCTCACACCGGGTAAATCCTTAACCCTTCCTCCTCTTACTAATACTACAGAATGTTCTTGTAAATTATGGCCAATACCAGGTATATAAGCAGTGATTCAAATCCAGAGGTTAATCGTACTCTGGCAACTTTACGTAAGGCAGAGTTGGGTTTTTTGGGGTTGATAGTGGAAAAGTCGACAGATAAGTCATCCTTACTGTCCCTCTACAGAACCGTACATGAGATTTTCACTCATACGGCTCCTCGTTCAATTATTTCGAAGGGATCCTTTTCCTCGTTCGAGAGTCTCCGCCCTTCTTCCACTCCGTCCCGAAGACTAACTAAGACCAATTGAGTCACGTTTTCATGTTCTAATTGAACACTTTCCATTTATGATTAAAGGAGAAGATTGTTCTTTTACCAAACATATGCGGATCAAATCACGTCTTATAATAAGAAGAAATCTTTCTCGGTATCAATCCCCTTGCCCCTCATTCTTGAGAATCAGAAGGATCCTTTTCGAGTTTCCATTTCTTCATTTTTCGAGTTTCCATTTCTTCATTTTGAATCTGGGCTCTTCTATCTTCGACTTCTTTTTTGGCTTTATTCTTTATTTATTTCATTTCGATTTTTCCCTCTTCCTCTATCCCTATCCTCTAGG
scaffold_14	Ensembl_Plants	sense_intronic	116359	116446	.	+	.	ID=gene:ENSRNA049458118	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=GAGAGCCAAATGAATCGAAAGATTCATGTTTGGTTCGGGAAGAGATCATAAAAATTGTAAACTTAATAGCAAGATAATCTACTTTCAT	scaffold_14	Ensembl_Plants	LTR	114816	128706	108002	-	.	ID=36477	repeat_name=LTR_Os_chr_04_669	repeat_type=LTRs	sequence=ATCAAGCTAACTTTATCTTTATGAAATTCTAGTGTTTTTTTTACTAATTCTTTACTAATTCTAAGTAGAACTTCCAATTTCGAACTAGTTAATAACTAAGATTTATAATTAAGATCTGACATTTTAAGGATTCCCTATATATATTTCTATTTGTTACACTATTTCTGTTATGTAAGCCCACTTAGCTCAGAGGTTAGAGCATCGCATTTGTAATGCGAGGGTCATCGGTTCAAATCCGATAGTCGGCTTTTTTCTCTATCGATGTTCCATGAACAAGAATTTCTCTTTTCTCTAAATTAAATGGGGAATCGAGGGTCTATTATATCGTTCTACCTTACAATTTTGCTAGATACAAAGCATAAAAATAAATAATATATATACAAAAAATACGGATGTTGATGAAATTCGATTTTTTGTGGTACTTTTCGTAGATTTTACTCTGTTTATCCTTTAGTTTAATTCAGTTTGAATTTCGATGTATTCTGTAATGTAAATAGAATGAAATTTATTGTGTAAAAGAATTGATGAGCACTCCAAGAAATATCCTTATTTCTAGATTCATGTCTCCAGGATGATCCAAATACGCCGTCTGGGAGCTTTACCAGGACTCACTAGAAAAACGCCTAAATCCGGAAGTAATCAGAAAAAGAAATTCCATTCTGGGAAAAAAGAGCAATATCGTATTCGTCTTCAAGAAAAACAGAAATTGCGTTTTCATTATGGTCTGACAGAACGCCAATTACTAGATATGTACATATCGCTGGAAAAGCAAAAAGATCCACAGGTCAGTTTTACTACAATTACTTGAAATGCGTTTGGATAATATCCTTTTTCGATTGGGTATGGCTTCAACCATTCCTGGGGCCCGGCAATTAGTTAACCATAGACATATTTAGTTAATGGTCGTATAGTTGATATACCAAGTTTTCGTTGCAAACCCCGAGATATTATTACTACGAAGGATAACCAACGATCAAAACGTCTGGTTCAAAATTCTATTGCTTCATCCGATCCGGGCAAATTGCCAAAGCATTTGACGGTTGACACATTGCAATATAAAGGACTAGTAAAAAAAATTCTAGATAGGAAGTGGGTCGGTCTCAAAGTAAATGAGTTGTTAGTTGTAGAATATTACTCTCGCCAGACTTGAACTTAACGAAAAAAGGAAAGGTTCATAGAATTTTTTTCCCCTTCCCCTTTCCCCGAACTAAATCGACCTAAGGCTCTTAATTCGTATTTTCCCGTTCACCTAGCAGAAATAGATTAACCCTAGGTTCCTTTTTCTTTTTGTTATTTCCTCGATTTTCCATACCACAGTAATTGCTATAGAGAATTTCTATTAAATAAAGATATTATTGCTGGAATAAATTGTTATTTAATTTGATACATTGTGATTGCTAACATTGATGAATTAAGAGAAACGGAAAGAGAGGGATTCGAACCCTCGGTAAACAAAAGTCTACATAGCAGTTCCAATGCTACGCCTTGAACCGCTCGGCCATCTCTCCTCCATAATCTTATTATGGAAAATAAACTGAGTGAATAGCGAGTTTTCGTATTCCTGCAGTACAGGTACAGCCACAACGGCTGGGGGATTCCATGGCTCTATGGGAAAAATTCCTTTTCATCTAAGTGGAAGGATCCAGTATTTTTTTTTTACTAGGAATTCCGCTCCCTCGAAAAGTTTTTCTTTGGGGAAAACCAAAATAAAAAGAGAATGGAAGAATTCTTCTTATTCCATAAGAAAATAAAGGAACCCTAGAATTCTATTTGCATAAGGTACGTTACGCCATACAATCTAAATATAAAAAAGGGTATGGGGCAATTAATGACTTTGAAAACGCGAATAGCTGATGAGAGAAGTTGTTGTTTAGAAATAGGAAAGTGGAATGAAATCTAGTCTTAGTCAAATATTTCATATCTCTTCTTGTCCAAACAGAAGGAAAAGAAGACAATTTGAGCTGAGCGGAAAATCCATACCTCTCTTATCCATTTAGAGCATATGGATCGATTTATAAGAATCGAATGTTTTGTTTTTATGTTATTTTGTGATAGAATGAAAAGAATTCTATATAGAATGGGTTGGGAATTATGCCTAGATCCCGTATAAATGGAAATTTCATTGATAAGACCTCCTCGATGTAGCCAATATTTTATTGCAAATAATTCCGACAACCTCCGGGGAAAAAAGGGCATTTACTTATATAGAGATGGTGCGATTTGACTCGTTTTTTTTTAGCCCTACCTACATCTCATTCTTACGAGAAAGAGAGGGGGTTCGCATAGAGAGAACAAAATTAGTAAAGGAAACCCACGCTTGGGGAAGGTGAGGTGAACTAACAATTCCTTCTGTCGTGTATCCTCGATTGATGTGGCCTCAGATGCTTCAATTGTAGATTTGAGTATTGAGCGAAAGGTTACACCTACAGGATAGGCTCTGTATTACAGGCCAATCCGACTCTACTAGTACCAATAGGCAGCATAGGGGAGAAAAGCACTACACCTCGAAATAGGAATCAACAAGAGAAAAACTTTGTTAGAAATTAGCCCTTTCCTGATTGGTATCAGGTTGGGAAGAATGGTTAGGATAACAAACAACCATCAGTTTGTACTTTGGATACCCTTATAACCATCAAAGGTCGTTGAAGTGGCTAATTCCTCTAAATAGGAGGCGTTGAGAACAAAGAAATTCTTGGAGCTATCATTTTCCTCTAGCATTAATAGAATTCATTGGTGTTAAGAAAAACCTCTTGGGGGAAGGTTGGCTAGAGATTTCTTGGAAAAATACCAGCCCCCTTCGGTCCATAATGAGATGGAACTAATTCTATTTTTATTCTATAGATTTTTCGCTTAGTACTATGTACAGAAGGGAGAAGCCGTATGAGATGAAAACCTCATGTACGGTTTTGGAACGGAGATTTTTTGAATTGAATAGAATGAACGACCGTAACGGATGTTGGCTCAATCCGAAGGAAATTATGCGGAAGCTTTGCAGAATTATTATGAAGCTACGCGACTAGAAATTGATCCCTATGATCGAAGTTATATACTATATAACATAGGCCTTATACACACAAGCAATGGAGAGCATACAAAGGCTTTGGAATATTATTTCCGGGCGCTAGAACGAAACCCCTTCTTACCGCAAGCTTTTAATAATATGGCCGTGATCTGTCATTACGTGCGACTATCTCCACTATAGAAAGAAGAAAAAAAAAAGGAGAAAATTTTCTAGTAAATACTAGAAAAAAGGGCTTTCTACATAGGGATCGTCAAAACAACGATTTTACCCTATCAGCTGTAGGAAGGAAAGACACTTCACGAGAATCAAAATAGGAAGAAAGTAGAGCCTATACTACTATTCTATGGATAAAGCTGAAATTGATAGAGAAAACACCGTAAAGATCAATTAGTGAGCGACTGGGTCGATACAACTAAAAAAAAAACTGCTTCATTATACCACAATATGGGACAAAATTTAGGAATCCGCTTATGTAATAAAGCCGATCCACTAAGGGATTAAGCAGCGGTGTAGTATCAGATCCCAAAGATAGTAAGTTCTTTTTTCTTTGTTATGGGAAAAAGTCTTTTTCGAGGATTCTATAGAAATTTCATATATGAAAGAAACGAAACCGAGATAGTTACCTTTCAGAAAATTGGAACGAAGGATATAGGTCTATCTATGCTTCATTCTTCTGAAGGTGGGAGAAAAGATCAAACTGATTATTGATCAAAATTAGGGTTGAAACTTAGGTAATTAACTTCTTCTGCTTAACCCAAGAAGAAATTGGATTGATTTTTGAGAAATCGAATTCAGTTAATATAGGGGAAATTAAGATAGCAATTTCTGAGCCGTATGAGGTAGGAAACTCTCAAGTACGGTTCTAGGGGAAGGAACTGCCTATTCCGACCGAGGAGAACAGGCCATTCTACAGGGCGATTCGGAAATTGCGGAAGCTTGGTTTGATCAAGCTGCTGAGTATTGGAAACAAGCTATAGCGCTTACTCCGGGAAATTATATTGAAGCACAGAACTGGTTGAAGATTACGAAGCGCTTTGAATTTGAATAAAACAACTCTCCATTTCCATAAAATGGGTGGTTTGGTTGTTGATCCATTAATCAAATAATTTAGGTAAGAAGATCAAATCAAGAATTTCATTATATCCCTTTCTTCTACCTTCGATTTTATATCATATTTCATAAAGATAAATAATAGGGATAGGCTCTGGAACAGAAGTAATAAAGCACATAAAAGGTGGCAATCTAAATATTCCTACCTAATCTATCAGACGGTCTTATTAATAATTCTAATGAGTTATCTTGGAATTTGGAATCGCATAAAAAAATCTATATATGCTCACTCAAGGAAAGTAGATGTGGATAGGGGCTTATACCCTCAAAAAAAAATACACTAGCTTCTTAAATTAAAACGTAAAAAAAAAAAAAGATTTTTTTTGTTACGTCGGGAAATAATTTTCCAGAAGAACCCATGTCCGTTAGGCACCTAATCCTTATGTCATAATAGATCCGAACACTTGCCTCGGATTGACTTCAATATATAATTGCTCCAGTGAATAACTAAAAAAAATAGAAGGACGGTAGATAGTAAAGAAAAGGACTAATCATAATATCTATCTTTCAAAGATTCAATAAAAAGACAGTTGGCGGGTCTCTTTGTATGTCTTGTCCGGAAAGAGGAGGACTTAATGATTATTCGTTCGCCGGAACCAGAAGTTAAAATTGTTGTGGATAGGGATCCTGTAAAAACATCTTTTGAGGAATGGGCCAGACCCGGGCATTTCTCAAGAACAATAGCTAAGGGTCCCGATACTACCACTTGGATCTGGAACCTACATGCTGATGCTCACGATTTCGATAGTCATACCGGTGATTTGGAGGAGATCTCCCGAAAAGTCTTTAGTGCTCATTTCGGTCAACTCTCCATTATCTTTCTTTGGTTGAGTGGGATGTACTTCCACGGTGCCCGTTTTTCCAATTATGAAGCATGGCTAAGCGATCCTACTCACATTGGCCCCAGTGCTCAGGTAGTTTGGCCAATAGTAGGGCAAGAAATTTTGAATGGTGATGTAGGCGGGGGTTTCCGAGGAATCCAAATAACCTCTGGGTTTTTTCAGATTTGGCGAGCATCCGGAATAACTAGTGAATTACAACTCTATTGTACCGCATCGGTGCATTGATTTTTGCATCGTTAATGCTTTTTGCTGGTTGGTTCCATTATCACAAAGCTGCTCCCAAATTGGCCTGGTTCCAAGATGTAGAATCCATGTTGAATCACCACTAGCGGGGTTATTAGGACTTGGGTCTCTTTCTTGGGCGGGACACCAAATCCATGTATCTTTACCGATTAACCAATTTCTCGACGCTGGGGTTGATCCTAAAGAGATACCACTTCCTCATGAATTTATCTTGAATCGCGACCTTTTGGCTCAACTTTATCCTAGTTTTGCCGAAGGAGCAACTCCCTTTTTCACCTTGAATTGGTCCAAATATGCAGAATTTCTTAGTTTTCGCGGAGGACTAGATCCAATAACCGGTGGTCTATGGTTGAGCGATATTGCACACCATCATTTAGCTATGCTATTCTTTTCCTGATCGCTGGTCATATGTATAGGACCAACTGGGGTATTGGTCATGGACTTAAAGATATTTTGGAGGCTCATAAGGGCCCATTTACAGGACAAGGCCATAAGGGTCTCTATGAAATCCTAACAACGTCATGGCATGCTCAATTATCTCTTAACCTAGCTATGCTAGGCTCTACAACTATTGTTGTAGCTCATCATATGTACTCTATGCCCCCCTATCCATACCTAGCTACCGACTATGGTACACAACTTTCCTTGTTCACACACCACATGTGGATTGGCGGATTTCTAATAGTCGGTGCTGCTGCACATGCAGCCATTTTTATGGTAAGAGACTATGATCCAACTACTCGATACAACGATCTATTAGATCGCGTCCTTAGACACCGCGATGCAATCATATCCCACCTTAACTGGGTATGTATATTTCTGGGTTTTCACAGTTTTGGCTTGTACATTCATAATGATACCATGAGTGCTTTAGGCCGTCCCCAGATATGTTTTCGGATACCGCCATACAATTACAACCCATCTTTGCTCAATGGATACAAAATATCCATGCTGGCGCGCCTGGCGTAACAGCTCCTGGTGCAACAACAAGTACCAGCTTAACGTGGGGAGGCAGCGAGTTAGTAGCTGTAGGCGGCAAAGTGGCTTTGTTACCTATTCCATTAGGAACCGCAGATTTTTTAGTCCATCACATTCACGCATTTCTATCCATGTGACTGTATTAATACTTTTGAAAGGTGTTTTATTTGCTCGCAGTTCCCGTCTGATACCTGATAAAGCAAATCTTGGCTTTCGCTTCCCTTGCGACGGGCCTGGGCGAGGGGGAACATGTCAAGTATCCGCCTGGGATCATGTTTTCTTAGGTCTATTCTGGATGTATAATTCCATTTCGGTAGTTATTTTCCATTTCAGTTGGAAAATGCAGTCGGATGTTTGGGGTACTATAAGTGATCAAGGGATAGTAACTCATATCACAGGGGGAAACTTTGCACAGAGTTCCATTACGATTAATGGTTGGCTTCGAGATTTCTTGTGGGCACAGGCATCCCAAGTAATTCAGTCTTATGGTTCTTCATTATCCGCATATGGTCTTTTTTTCTTAGGCGCTCATTTTGTCTGGGCTTTCAGTTTAATGTTTTTATTCAGCGGCCGTGGTTATTGGCAAGAACTCATTGAATCTATCGTTTGGGCTCACAACAAATTAAAAGTTGCTCCTGCTACTCAGCCTAGAGCCTTGAGCATTATACAAGGACGTGCTGTAGGAGTAACCCATTACCTTCTGGGTGGAATTGCCACAACATGGGCATTCTTCTTAGCGAGAATTATTGCAGTAGGATAGTGGCTAGGAGGATTTGAAAGGCATTATGGAATTAAGATTTCCCAGGTTTAGCCAAGGCTTAGCTCAGGACCCCACTACTCGTCGTATTTGGTTTGGTATTGCTACCGCACATGATTTCGAAAGTCATGATGATATTACTGAGGAACGTCTTTATCAGAACATTTTTGCTTCTCACTTTGGGCAGTTAGCAATAATCTTTCTATGGACGTCTGGAAATCTGTTTCATGTAGCTGGCAAGGAAATTTTGAATCATGGATACAGGATCCTTTACACGTAAGACCTATTGCTCATGCCATTTGGGATCCTCATTTTGGGCAACCCGCGGTGGAAGCCTTTACTCGAGGAGGTGCTGCCGGTCCAGTGAATATTGCTTATTCTGGGGTTTATCAGTGGTGGTATACAATTGGATTGCGCACCAATGAAGATCTTTATACTGGAGCTCTTTTTCTATTATTTCTTTCTACGCTATCCTTAATAGGGGGTTGGTTACATCTACAACCCAAATGGAAGCCAAGCCTTTCGTGGTTCAAAAATGCGGAATCTCGTCTCAATCATCATTTGTCAGACTTTTCGGGGTAAGTTCTTTGGCTTGGACAGGACATTTAGTTCATGTTGCTATTCCCGCATCCAGGGGGGAGTACGTTCGATGGAATAATTTCTTAGATGTATTACCCTATCCCCAGGGGTTGGGTCCCCTTCTGACGGGTCAGTGGAATCTTTATGCCCAAAATCCTGATTCGAGTAATCATTTATTTGGTACCACTCAAGGAGCGGGAACTGCCATTCTGACCCTTCTTGGGGGATTCCATCCACAAACACAAAGTTTGTGGCTGACCGATATTGCTCATCATCATTTAGCTATTGCATTTATTTTTCTCATTGCCGGTCATATGTATCGAACTAACTTCGGAATTGGGCACAGTATCAAAGATCTTTAGAAGCACATACTCCTCCGGGGGGTCGATTAGGACGTGGGCATAAAGGCCTTATGATACAATTAATAATTCGATTCATTTTCAATTAGGTCTTGCTCTAGCTTCCTTAGGGGTTATTACTTCCTTAGTAGCTCAACATATGTACTCTTTACCTGCTTATGCATTCATAGCACAAGACTTTACTACTCAAGCTGCTTTATATACTCATCACCAATACATTGCAGGGTTCATCATGACAGGGGCTTTTGCTCATGGAGCTATTTTTTTCATTAGGGATTACAATCCGGAACAGAATGAAGATAATGTATTGGCAAGAATGTTAGACCATAAAGAAGCTATCATATCTCATTTAAGTTGGGCTAGCCTCTTCCTAGGATTCCATACCTTAGGCCTTTATGTTCATAACGACGTCATGCTTGCTTTTGGTACTCCAGAAAAGCAAATCTTGATCGAACCTATATTTGCCCAATGGATACAATCTGCTCATGGTAAGACGACATATGGGTTCGATATACTCTTATCTTCAACGAATGGCCCCGCTTTCAATGCAGTCGAAGCATATGGTTGCCCGGATGGTTGAATGCTGTTAATGAGAATAGTAATTCGCTTTTCTTAACAATAGGACCCGGAGATTTCTTGGTTCATCATGCTATTGCTCTAGGTTTGCATACAACTACATTGATTTTAGTAAAGGGTGCTTAGATGCACGCGGTTCCAAATTAATGCCGGATAAAAAGGATTTCGGATATAGTTTTCCTTGCGACGGCCCAGGGCGCGGTGGTACTTGTGATATTTCTGCTTGGGACGCGTTTTATTTGGCAGTTTCTGGATGTTAAATACCATTGGATGGGTTACTTTTTATTGGCATTGGAAACACATCACATTATGGCAGGGCAACGTTTCACAATTTAATGAATCCTCCACTTATTTGATGGGATGGTTAAGAGATTACCTATGGTTAAACTCTTCACAACTTATCAATGGATATAATCCTTTTGGGATGAATAGTTTATCAGTATGGGCTTGGATGTTCTTATTTGGACATCTTGTTTGGGCTACTGGATTTATGTTCTTAATTTCCTGGCGTGGATATTGGCAGGAATTAATTGAGACTTTAGCATGGGCCCATGAACGCACACCTTTGGCTAATTTAATTCGCTGGAGAGATAAGCCCGTGGCTCTTCCATTGTGCAAGCAAGATTGGTTGGATTAGCCCACTTTTCCGTGGGTTATATATTCACTTATGCAGCTTTCTTGATTGCCTCAACATCAGGCAAGTTTGGTTAATTTAGTTATTTTTTTTTTGTTTTTTTGTACTGTATCAGAACCTAGTTCATTACTCTTGATGGAGAGGGAGGATCCGCCTTTTTAGATTTTTTTTCTATTTATTTTTCCATCTAGGATTAGAACCATATACTTGGTAATAATAGGAACGGCACATTATGGCAAAAAAAAGTTGATTCAGAGGGAGAAGAAGCGGCAGAAATTAGAAAAAAAATATCATTTGATTCGTGGATCCTCAAAAAAAAAGATAAGAAGCAAAGTTTCCCCTTTGAGTTTGAGCGAAAAAAAAAAAATGCAAGAAAAATTGCAATCCCTACCACGTAATAGTGCACCTACACGCCTTCATCGACGTTGTTTTTTAACCGGAAGACCTAGAGCTAACTATCGAGACTTTGGGCTATCCGGACACATACTTCGAGAAATGGTTTATGCATGTTTGTTACCGGGTGCAACAAGATCCAGTTGGTAAGGATAAAATACCCTTTCATATTTGTATGGTTTTCTCGAATTGATGATCGTAGAAGAGCCCTCTTTACCATTCTGTATAAATGGACTATTCTATTTATATAGATATGGTAGAGGGGCGTATCCAATCCCCTTTTATCCACAAGTTCCCCGCTCTTTAGTTTAAGAAGGTAGAGCAGTTTGGTAGCTCACAAAGCTCATAACCTTGGGGTTACGGGTTCGATACTCACTACCCGCTCCATATTCCTTCTTTATGATATATGTATCATCCATTTGTATATGGTATATGGATTTTTTTTCTTTCCTAAAAGAGTTTCGGTCTAACAGTTTTTTATTTTTTCTCTTGTTCCGAGAAAAAAGTAAAAGAAAGAAAAAAATACGAAAGAAAAGCGTCCATTGTCTAATGGATAGGACAGAGGTCTTCTAAACCTTTGGTATAGGTTCAAATCCTATTGGACGCAATCTTTTTTCTATCTATTCTTTAAATAACTATACTAAATACTAAGAAAACTTTTTTGCATGATTCAAATGAAAAATCTTTCTCAATGATTCCTCTTCTACTAACACGAGTTCTACTAATAAGAGTAGACATGCTATATTTATGTTTGTTCCTGAAGGGAAAACCGTTCAAGCTGTTCCTGAATAGCTTCCTTCAAAAGGGTTTCTGCTTGCTCGGTGAATGTCTTGCTAGAAGATATAATTTCTTGGAATTGAGGTTTAGTATCTTTAGGTGTTTACGTAACTCATCCAGAAATTTCTTTACCTGTTCATTTCTAACGAATCAAGATATCCTCTCGTTCCGGTATAAATGGTAGCTACTTGCTCTTCCACTGGGAGAGGGTTTGATTGGGATTGTTTAAGCAATTCCCGTAATCGTCGACCCCTTGCCAATTGATTCTGACTTGTTTTATCGAGAGCAGAGGCGAATTGTGCAAAGGCTTGTAACTCCGCGAATTGAGCTAATTCCAATTTTGATTTGCCAGCTACTTGTTTCATGGCTTTAATTGAGCTGCGGATCCTACTCTGGAAACAGAAATACCCACATTAATAGCAGGTCGAATTCCGGCATTGAATAGATCCGCGGATAAGAATATTTGTCCATCTGTAATTGAGATTACATTAGTAGGAATATAGGCGGAAACGTCTCCAGATTGAGTCTCCACTATTGGTAAAGCGGTCATACTCCCTTCGCCTAAAAGAGAATTTAATTTAGCGGCTCTTTCTAAAAGGCGTGAATGCAAATAAAAAACATCCCCTGGATAAGCTTCGCGGCCGGGGGGTCTTCTTAATAGAAGGGACATTTGGCGATAAGCTTGTGCCTGTTTGGAGAGATCATCATAAATTATTAAAGTATGCCGTTCGCGGTACATAAAATACTCAGCCAGGGCTGCTCCCGTATAAGGAGCGAGATATTGTAATGTAGCGGGTGAATCCGCCATTCAGCTACTACAATAGTGTATTCCATGGCCCCCTCTTCGTGGAAAGTAGTTACTACTTGAGCCACGGAGGATGCTCTTTGACCGATAGCTACATAAACACATATTACATCTTGCCCTTTTTGATTGAGAATTGTATCTGTGGCTACTGCTGTTTTGCCAGTCTGTCTGTCCCCAATAATTAACTCTCGCTGACCGCGCCCTATGGGGATCATCGAATCGATAGCAATAAGCCCTGTTTGAAGGGGTTCATATACGGAACGCCTAGAAATTATACCCGGAGCAGGAGATTCAATTAAGCGAGATTCCGAAGCGACAATTTCGCCTCTCCCATCAATAGGTTTAGCGAGAGCATTTATAACACGACCCAAGTAAGCCTCGCTCACGGGTATCTGAGCAATTCTTCCTGTTGCTTTTACAAAACTTCCCTCTTGTATCATCAACCCATCGCCCATTAATACAATTCCAACATTTTTGGATTCCAAATTCAGAGCAATACCTCTCGTCCCTTCCGCAAATTCGACTAATTCACCTGACATTATTTCACCAAGACCTATAATACGAGCAATCCCATCCCCCACTTGAACTACGCGACCGATATTCTCAATCCCTACTTTCCTATTATATTGTTCAATACGTTCGCGGAGAATTTTATTAATTTCGTCGACTCGAAGGGTTGCCATTAGTGTTTCTTGAATCTTTTTTTTTTTCGGAAGCAAGGGGAAAAATAATGCCTAAATTCTAAACGAAAGTAGAAGTTCAAAACCTAATAAATTTCATTATCTCTTCCATTCTATGGCCCCGAGAATGCCAATATTAGCACGAATCGTACGGAAATGTAACTCGGTATTCAAACAACTATTCAGAGTTCCTAGAGCTCCTTGTACGGCTTGTTGGAAAACCCGTTGTCGAACCTGATTCATCGCCCTTTGTTTTTCAAATAAAGGGTTTCGTTTTTAGACTTTTCTAATTGTTCCAAACTAATAGAAGTAGCATTAATCAAATTTGCTTTTTCTCGTTCTATTTCAGAGTATCCATTCATTCGATACTCATCTGCTTCTAGTTCGACTTTCTGTAATCGAATCCGAGCTTTTTCGAGTTGTTCAAGGGTCCCTCTACGCAATTCTTCCGAATTTCGAATAGTACTTAAGATCCTCTGTTTTCGATTATCTAATAAATCTTTTAATGAAAGTAGATTATCTTGCTATTAAGTTTACAATTTTTATGATCTCTTCCCGAACCAAACATGAATCTTTCGATTCATTTGGCTCTCCCGCTCCTTTTTTTCTCTTTTGCTATGTATTTTTTTCTCTTTGCTATGTATTATGGCTATTTCCATATCTTTTTTTTATGTAATGAGCCTATCCTCTCTTTCTGTTTGTATTTCTATATACCCAAACTTATATAAGACTAGATGAATATTAAGATAAGAGGATTCTTCCAACTAGATAAAAATCTATCATGGTCAGCAAAGTTGTTTCTTTATTTGTGTTTGCTCTGTTAGTTAATAATTTCAATTTCATTAAGAAAAACAAACTAAATAAATGGAAAATCTAAATTGATACAATTCCTTTTATTTTTTCTTCAAATCCAAAAAATTTCTCTTTTATACATAGGTCGTCGATTCGGCATTGGAAAAAGGGCTGGATGCCCTTCTAGTAAATAGTTCAAACTATTTTATCGATATGAGTGTTCTATATCAGATAAATTCCACACTAGCTATTCCCGTTTAAAGCATTTCGAGACTAATGTAGTTGTAGAAAGAGTACCCCTTTTGCCCGGACTTCAAGCAGTTTAGCTTTAACCGTGTTAATGGTCTCACATTATTGGTCTATAGAGAATCAAAGTAAATTTACCAATGAGTCGCGAAATGCTATGGTTCTTCCATATGATTTCTGAAGTTATTCAGAAGTAATTCGTCGAGATCGTGCACCTTTTCTTATTTATCCAAAAAAATACTAAAAAATATTCTAAAGTGCAGCCGGATAGATCCAATCTATTCTTGAAATAGACAACTCGCACACACTCCCTTTCCAAAAAAAATCAATACACCAACCACTACAGTTAGATTTATTAGATTTGTTGCTAAAATATCGGTATTAAGCCCGAAACTCCCAGCGAATGGCCTGTGAGCTAAAAAAACGAAAGAATAGGTTACATTTTTCATATGCTCTCCTCTATAGATAGGACGAACAAAGAAGAAAGTTTTTCGATCACTTACTTCGCTCGCCCTTTTTTGATCGGTTTTTTTAATGCAATCTTTTTTTAATGCAAATAGATTTAATCTAATAATTTCTTTTAGATTAAGTCTTAGGTCTTGTTTGACCTGTAAAAAATCTCCTTTGTTGAAATGTTCCCAAAATTCCTAAAATAAAAGAAAAAGAGTTTCCACTGTCCTAAACTAAGAATGGGAAGGAAGAGGACGAGCGTATCCTCTAAATTGATCATGCTCAAATCAGCCCTTCCTGGGGTTCCTGGGGTATTGTCTGTCCCGATAAATACAAAATTCCCGGAATAATATAATAAATAGGAGTAAAGTATTGATATACTTGGAATTACAGAAGCAAATCCCAATGTACGAAAAAAAAGAAAAAAGTATCTAATCTAAAGGACTCTTTTTCTTTTTTAGGATTAAACAAAAGGGTTCGCAAATAAAAGCGCTAGTGCCACAACCAGTCCATAAATTGTTAAAGCTTCCATAAAAGCTAGACTAAGCAATAAAGTACCTCGTATTTTACCTTCTGCTTCTGGCTGTCTCGCAATACCTTCTACAGCTTGTCCTGCAGCAGTACCTTGACCAACTCCGGGCCCAATA
9	Ensembl_Plants	sense_intronic	9188987	9189073	.	+	.	ID=gene:ENSRNA049456697	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=GAGAGCCAAATGAATCGAAAGATTCATGTTTGGTTCGGGAAGAGATCATAAAAATTGTAAACTTAATAGCAAGATAATCTACTTTCC	9	Ensembl_Plants	LTR	9187830	9190114	16907	-	.	ID=36529	repeat_name=LTR_Os_chr_04_669	repeat_type=LTRs	sequence=GTGGCTAGTGCTGTTTTGCCAGTCTGTCTGTCCCCAATAATTAACTCTCGCTGACCGCGCCCTATGGGGATCATCGAATCGATAGCAATAAGCCCTGTTTGAAGGGGTTCATATACGGAACGCATAGAAATTATACCTAGAGCAGGAGATTCAATTAAGCGAGATTCCGAAGGGACAATTTCGCCTCTCCCATCAATAGGTTTAGCGAGAGCATTTATAACACGACCCAAGTAAGCCTCGCTCACGGATATCTGAGCAATTCTTCCTGTTGCTTTTACAAAACTTCCCTCTTGTATCATCAACCCATCGCCCATTAATACAATTCCAACATTTTTGGATTCCAAATTCAGAGCAATACCTCTTGTCCCTTCCACAAATTTGACTAATTCACCTGACATTATTTCACCAAGACCTATAATATGAGCAATCCCATCCCCCACTTGAACTACGCGACCGATATTCTCAATCCCTACTTTCCTATTAAATTGTTCAATACGTTTGCAGAGAATTTTATTAATTTCGTCGACTCGAAGGGTTGCCATTAGTGTTTCTTGAATCTTTTTTTTGAAAGCAAGGGGAAAATAATGCCTAAATTCTAAAAGAAAGTAGAAGTTCAAAACCTAATAAATTTCATTATCTCTTCCATTCTATGGCCCCGAGAATGCCAATATTAGCACGGATCGTACGGAAATGTAACTCGGTATTCAAACAACTATTCAAAGTTCCTAGAGCTCCTTGTACGGCTTGTTGGAAAACCCGTTGTCGAACCTGATTCATCGCCCTTTGTTTTTCAAAATAAAGGGTTTCGTTTTTAGACTTTTCTAATTGTTCCAAACTAATAGAAGTAGCATTAATCAAATTTGCCTTTTCTCATTCTATTTCAGAGTATCCATTCATTCGATACTCATCTGCTTCTAGTTCGACTTTCTGTAATCGAATCCGAGCTTTTTCGAGTTGTTCAAGGGTCCCTCTATGCAATTCTTCCGAATTTCGAATAGTACTTAAGATCCTCTATTTTTTATTATCTAATAAATCTTTTAAGGAAAGTAGATTATCTTGCTATTAAGTTTACAATTTTTATGATCTCTTCCCGAACCAAACATGAATCTTTCGATTCATTTGGCTCTCCCGCTCCTTTTTTTCTCTTTTGCTATGTATTACGGCTATTTCCATATTTTTTTTTATGTAATGAGCCTATCCTCTGTTTTCTGTTTGTATTTCTATATACCCAAACATATATAAGACTAGATGAATATTAAGATAAGAGGATTCTTCCAACTAGATAAAAATATATCATGGTCAGCAAAGTTATTTCTTTATTTGTGTTTGCTCTGTTAGTTAATAATTTCAATTTCATTAAGAAAAAAAACTAAATAAATGGAAAATCTAAATTGATACAATTCCTTTTATTTTTTCTTCAAATCCAAAAACTTTCTCTTTTATACATATGTCGTCGATTCGGCATTGGAAAAAGGGCTGGATGCCCTTCTAGTAAATAGTTCAAACTATTTTATCGATATGAGTGTTCTATATCAGATAAATTCCACACTAGCTATTTCCCGTTTAAAGCATTTCGAGACTAATGTAGTTGTAGAAAGAGTATCCCCTTTTGCCCGGACTTCAAGCAGTTTAGCTTTAACCGTGTCAATGGTCTCACATTATTGGTCTATAGAGAATCAAAGTAAATTTACCAATGAGTCGCGAAATGCTATGGTTCTTCCATATGATTTCTAAAGTTATTCAGAAGTAATTCGTCGAGATCGTGCACCTTTTCTTATTTATCAAAAAAATACTAAAAAATATTCTAAAGTGCGGCCGGATAAATCCAATCTATTCTTGAAATAGACAACTCGCACACACTCCCTTTCTAAAACAAAATCAATACACCAACCACTACAGTTAGATTTATTAGATTTGTTGCTAAAATATCGGTATTAAGTCCGAAACTCCCAGCGAATGGCCTGTGAGCTAAAAAAATGAAAGAATAGGTTACATTTTTCATATGCTCTCCTCTTATAGATAGGATGAACAAAGAAGAAAGTTTTTCGATCACTTATTTCGCTCGCCCTTTTTTGATCAGTTTTTTTAATGCAATCTTTTTTTAATGCAAATAGATTTAATCTAATAATTTCTTTTAGATTAAGTCTTAGGTCTTGTTTGACCCGTAAAAAATCTCCTTTGTTGAAATGTTCCCAAAATTCCTAAAATAAAATAAAAGAAAAAGAGTTTCCACTGTCCTAAACTAAGAATGAAGGAGGAGGACGAGCGTATCCTCTAAATTGAT
3	Ensembl_Plants	sense_intronic	10861912	10862083	.	+	.	ID=gene:ENSRNA049456022	Name=Intron_gpI	biotype=sense_intronic	description=Group I catalytic intron	sequence=CTACGGACTTTTATTGATTGTATTGAGCCTTGGTATGGAAACCTGCTAAGTGATAACTTCCAAATTCAGAGAAACCCTGGAATGAAAAATGGGCGATCCTGAGCCAAATCCCTTTTTTGAAAAAAAAAAAAAGTGGTTCTCAAACTAGAACCCAAAGGAAAAGGAAGATTTG	3	Ensembl_Plants	LTR/Gypsy	10861891	10862076	1433	+	.	ID=18276	repeat_name=LTR_AC188734.2_15331	repeat_type=LTRs	sequence=TGTGGCGAAATCGGTAGACGCTACGGACTTTTATTGATTGTATTGAGCCTTGGTATGGAAACCTGCTAAGTGATAACTTCCAAATTCAGAGAAACCCTGGAATGAAAAATGGGCGATCCTGAGCCAAATCCCTTTTTTGAAAAAAAAAAAAAGTGGTTCTCAAACTAGAACCCAAAGGAAAAGGA
7	Ensembl_Plants	sense_intronic	31475254	31475340	.	-	.	ID=gene:ENSRNA049453127	Name=Intron_gpII	biotype=sense_intronic	description=Group II catalytic intron	sequence=GAGAGCCAAATGAATCGAAAGATTCATGTTTGGTTCGGGAAGAGATCATAAAAATTGTAAACTTAATAGCAAGATAATCTACTTTAT	7	Ensembl_Plants	LTR	31475227	31475368	898	+	.	ID=36490	repeat_name=LTR_Os_chr_04_669	repeat_type=LTRs	sequence=TTTCAATTATCTAAATTATCTAATAAATAAAGTAGATTATCTTGCTATTAAGTTTACAATTTTTATGATCTCTTCCCGAACCAAACATGAATCTTTCGATTCATTTGGCTCTCCCGCTCCTTTTTTTTCTCTTTTGCTATG