>ID=gene:ENSRNA049480753;Name=U2;biotype=snRNA;description=U2 spliceosomal RNA overlaps with ID=2244610;repeat_name=LTR_Gm_14_4511;repeat_type=LTRs::scaffold41285:9300-9373(-)
TTTCTCGGCCTTTTGGCTAAAATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGACTACA
>ID=gene:ENSRNA049480756;Name=U2;biotype=snRNA;description=U2 spliceosomal RNA overlaps with ID=2244611;repeat_name=LTR_Gm_14_4511;repeat_type=LTRs::scaffold41285:12210-12283(-)
TTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGATTACA
>ID=gene:ENSRNA049480758;Name=U2;biotype=snRNA;description=U2 spliceosomal RNA overlaps with ID=2244609;repeat_name=LTR_Gm_14_4511;repeat_type=LTRs::scaffold41285:3780-3853(-)
TTTCTCGGCCTTTTGGCTAAAATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATATGGACTACA
>ID=gene:ENSRNA049479809;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2226844;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::scaffold32920:35015-35118(-)
GTCCCTTCGGGGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTT
>ID=gene:ENSRNA049479817;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2226845;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::scaffold32920:50206-50302(-)
GTCCCTTCGGGTACATGCGATAAAACTGGAATGATACAGGGAAGATTAGCATCGCCCCTTCTCAAGGATGACACGCACAAATTAAGTAATGGTCCA
>ID=gene:ENSRNA049479806;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2226843;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::scaffold32920:33082-33185(-)
GTCCCTTCGGGGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTT
>ID=gene:ENSRNA049478916;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2226839;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::scaffold14510:36024-36127(+)
GTCCCTTCGGGGACATCTGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTT
>ID=gene:ENSRNA049481342;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=34155;repeat_name=EnSpm-4_HV;repeat_type=Type II Transposons::scaffold65197:22229-22233(+)
TATA
>ID=gene:ENSRNA049481342;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=1872642;repeat_name=trep1304;repeat_type=Type II Transposons::scaffold65197:22226-22233(+)
AATTATA
>ID=gene:ENSRNA049481342;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2226846;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::scaffold65197:22130-22227(+)
GTCCCTTCGGGGACATTCGGTAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAA
>ID=gene:ENSRNA049478281;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2226841;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::scaffold26861:82740-82843(+)
GTCCCTTCGGGGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTT
>ID=gene:ENSRNA049481299;Name=U2;biotype=snRNA;description=U2 spliceosomal RNA overlaps with ID=1148602;repeat_name=DTC_Jorge_3B_053_M11-1;repeat_type=Type II Transposons::scaffold77594:20293-20342(+)
ATCTCTAAAAAGACAAATATTTAGGAACAGAGGGAGTACATGGGTTATG
>ID=gene:ENSRNA049477998;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2226836;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::scaffold64139:69061-69121(+)
GATTAGCATGGCCCATGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCGATTTTTT
>ID=gene:ENSRNA049478002;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2226837;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::scaffold64139:91709-91812(+)
GTCCCTTCGGGGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATCTTT
>ID=gene:ENSRNA049478005;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2226835;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::scaffold64139:67161-67264(+)
GTCCCTTCGGGGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTT
>ID=gene:ENSRNA049477313;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=844236;repeat_name=DTC_Jorge_3B_061_J17-1;repeat_type=Type II Transposons::scaffold10596:17155-17262(-)
GTCCCTTCGGGGACATCTGATAAAATTGGAACGATACAGAGAAAGTAGTACTAGTACTGCTACAGTACGAGTACGTACTCCTCCATCACATATTGTAAGACGTTATT
>ID=gene:ENSRNA049473719;Name=U1;biotype=snRNA;description=U1 spliceosomal RNA overlaps with ID=2241888;repeat_name=LTR_Gm_08_2830;repeat_type=LTRs::C166965779:596-757(+)
TTACTTAGCTGAACGGGGTCCATAAGAGATCAAGAAGTCTCATGGCCTAGATCAATGGCCTACATTGCACGTTGTAGGAGCACTGGTTTACCATCTGCCTACGGGTAGAGTGGACGTTAAAATTTATTGTAGAGGGGTTATGTGTTTAGCGCGGCCCCTAC
>ID=gene:ENSRNA049471890;Name=U2;biotype=snRNA;description=U2 spliceosomal RNA overlaps with ID=1805076;repeat_name=LTR_EF426565.1_424;repeat_type=LTRs::scaffold38186:43412-43447(+)
ATACTTCATGAAACGGCAATTCAGCTGCTGCTCTA
>ID=gene:ENSRNA049468797;Name=U2;biotype=snRNA;description=U2 spliceosomal RNA overlaps with ID=2244612;repeat_name=LTR_Gm_14_4511;repeat_type=LTRs::C166999017:196-269(-)
TTTCTCGGCCTTTTGGCTAAAATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATATGGACTACA
>ID=gene:ENSRNA049468797;Name=U2;biotype=snRNA;description=U2 spliceosomal RNA overlaps with ID=2245283;repeat_name=LTR_AC190580.2_6272;repeat_type=LTRs::C166999017:214-274(-)
ATACCTTTCTCGGCCTTTTGGCTAAAATCAAGTGTAGTATCTGTTCTTATCAGTTTAATA
>ID=gene:ENSRNA049467912;Name=U1;biotype=snRNA;description=U1 spliceosomal RNA overlaps with ID=2176397;repeat_name=RLG_WHAM_3B_064_F23-1;repeat_type=LTRs::scaffold3776:153976-153982(+)
TAACTT
>ID=gene:ENSRNA049465504;Name=U1;biotype=snRNA;description=U1 spliceosomal RNA overlaps with ID=2241884;repeat_name=LTR_Gm_08_2830;repeat_type=LTRs::C167039826:375-416(-)
TAATTTGTGATAGAGGGGGCAAGCGTTCGCGCGGCCCCTGC
>ID=gene:ENSRNA049465504;Name=U1;biotype=snRNA;description=U1 spliceosomal RNA overlaps with ID=2241885;repeat_name=LTR_Gm_08_2830;repeat_type=LTRs::C167039826:429-499(-)
ATACTTACCTGGATGGGGTCTATGGGCGATCAATAAAGCTTATGGCCTAGGTTAACGGCTCACATTGCAC
>ID=gene:ENSRNA049464393;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=1932316;repeat_name=LTR_HVVMRXALLhA0325N20_v35_c2_2371;repeat_type=LTRs::scaffold202678:579-595(+)
CAGAGCACCGCAGCTA
>ID=gene:ENSRNA049464393;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=1993147;repeat_name=DTC_Clifford_3B_018_H13-1;repeat_type=Type II Transposons::scaffold202678:578-579(+)
G
>ID=gene:ENSRNA049464393;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2226856;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::scaffold202678:605-682(+)
TGGAACGATACAAAGAAGATTAGCATGGCCCCTGCGCAAGGATGACAAGGACAAATCGAGAAATGGTCCAAATTTTA
>ID=gene:ENSRNA049460742;Name=U1;biotype=snRNA;description=U1 spliceosomal RNA overlaps with ID=2241892;repeat_name=LTR_Gm_08_2830;repeat_type=LTRs::C167327125:2282-2417(+)
TGATCAAGAAAGGTCGTGGCCTAGATCAACTGCTCACATTGCACTTGATGAGCGTGTTGTTCTACCATCTCCCCAATTAGGAGAATGGACAGCATAATTTTTTGTAGAGGGGGCATGCGTTTGTGCGGCCCCTAC
>ID=gene:ENSRNA049476641;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=2226842;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::scaffold62630:66335-66437(+)
GTCCTTCGGGGGCATCCGATAAAATTGGAACGATACAGAAAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCAAGAAATGGTCCAATTTTTT
>ID=gene:ENSRNA049482699;Name=U2;biotype=snRNA;description=U2 spliceosomal RNA overlaps with ID=237573;repeat_name=RLG_Sakura_3B_068_J02-1;repeat_type=LTRs::scaffold63685:44-60(-)
CCCTGATGTCTACTAC
>ID=gene:ENSRNA049481010;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=729958;repeat_name=LTR_EF081027.1_414;repeat_type=LTRs::scaffold92546:690-704(+)
TCCAGTGCAGTGAG
>ID=gene:ENSRNA049480162;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1744061;repeat_name=trep815;repeat_type=LTRs::scaffold257018:334-562(+)
CACTTAGTGATTTTCTAGAAGAACAAATTGCTAGGGCTAGAGAAAGAGAAATTATTGAATCTGAATACGATGATGATAGTGATGATGAAAATATTCCTGTTATTCCTGAGGGTTATTTATTTTATCAAGATGCTTCTTTAGCTATTTTACCTTGCAGAGATAGATATGAGCTTAAGAGGTTATTAATTAAATGGAACAAAGAATCACTTAGATATAAAATGAAACCCG
>ID=gene:ENSRNA049479961;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2249130;repeat_name=RXX_Gk_DX402720.1_7357;repeat_type=Unknown::Scaffold315259:8-124(-)
TGCGATCACACTCACACTAGTGCACCAGATCCCACGAGAACTCCGCACTTAGGCGTGCTTGGGCGAGGGTAGTACTAGGATGGGTGACCTCCTCGGAAGTCCACGCGTTGCACGCA
>ID=gene:ENSRNA049479788;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=1900615;repeat_name=RLC_Angela_3B_055_G17-1;repeat_type=LTRs::scaffold47797:22950-23007(+)
ACGGGTTCAAGAACTATGTAGACATGACCGAGACACCTCTCCGGTCAATAACCAAGA
>ID=gene:ENSRNA049479701;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=826738;repeat_name=sabrina_115G1-1;repeat_type=LTRs::scaffold89806:5603-5720(-)
TTTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAATTTGGTGGTTAAACTCTACTGCGGTGACGATACTGTAGGGGAGGTCACGCGGCAAAATAGCTCGATGCCAGAA
>ID=gene:ENSRNA049479750;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=1300469;repeat_name=RLG_Ifis_3B_097_O05-1;repeat_type=LTRs::scaffold50929:19884-19891(-)
TTCCATT
>ID=gene:ENSRNA049479316;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=586000;repeat_name=RLG_Wilma_3B_097_H10-1;repeat_type=LTRs::scaffold5138:136812-136897(-)
TAGACTCATTAGGTGGGTTCTCTTGCTACAAGAATTTGACTTACATATCACTGATAAGAAAGGAGCTGAGAACCCCATAGCTGAT
>ID=gene:ENSRNA049478475;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1922247;repeat_name=trep4085;repeat_type=Type II Transposons::scaffold4755:18961-18965(-)
AGTT
>ID=gene:ENSRNA049478348;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=826402;repeat_name=sabrina_115G1-1;repeat_type=LTRs::scaffold7104:87458-87575(+)
TCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAATTTGGTGGTTAAACTCTACTGCGGTGACAATACTGTAGGGGAGGTCCTGCGGAAAAATAGCTCGATGCCAGAA
>ID=gene:ENSRNA049478040;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=140021;repeat_name=LTR_AC200842.1_90;repeat_type=LTRs::scaffold3049:167896-168077(+)
TTCCGTAATGCATCATCCCGTGACTAACTCATTAGTCACATTGCTTGCAAGGCTCATAGTGATGTGCATTACCGAGAGGGCCCAAAGATACCTCTCTGATACATGGAGTGACAAATCCTAATCTTGATCTATGCTGACTCAACAAACACCATCGGAGACACTTGTAGAGCATCTTTATAAT
>ID=gene:ENSRNA049477499;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=366167;repeat_name=RLG_Fatima_3B_061_J17-5;repeat_type=LTRs::scaffold4136:43809-43824(+)
TGTCGGTGTCAAAAC
>ID=gene:ENSRNA049477100;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1813639;repeat_name=LTR_BB_64;repeat_type=LTRs::scaffold46362:61336-61363(+)
GACATCTGCCATGACAATTCCATGACA
>ID=gene:ENSRNA049477085;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=1813640;repeat_name=LTR_BB_64;repeat_type=LTRs::scaffold46362:64572-64628(+)
TCGAGGATATACCCCACGGCGTAAGCCGGTCGGAAGTATAACCCGGCCGGACTTGG
>ID=gene:ENSRNA049477085;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=1813641;repeat_name=LTR_BB_64;repeat_type=LTRs::scaffold46362:64874-65220(+)
AGTCCTAATCCTAATAGGACTCCACCTGTAACCCATCCCTTCAACAAATATAAGGAGGGCAGGGCTCCCCAAAGAGGACTAGCTACAAGCGACAAGAAGAAGAAAATAATCTCTAGGGGTAGACACAAAGAGCCGGCTTACCGACGACTCCCTCATGATCATAATGAGATCTAGCCACAAACAACATGTAGGGTTATTACAGGATGATGTTTCCCAGGCCCGAAGCTGTCTAAACCCTTGTCTTGTATTGCGTCTTTCGATTCCGCTCAACCCCTCTCAAGCTACAACATAGATGCATTGGCCTCGCGACTAAGTCCTCACACTAAGGACATCTGCCGTGACATCT
>ID=gene:ENSRNA049477085;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=1813642;repeat_name=LTR_BB_64;repeat_type=LTRs::scaffold46362:65455-65513(+)
CCAAGTCCGACCGGGTTATACTTCCGACCGGCTTACGCCTTGGGGTATATCCCCGACA
>ID=gene:ENSRNA049477094;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1284170;repeat_name=trep1312;repeat_type=LTRs::scaffold46362:51304-51427(+)
TATTCCCTCTCATTTAACTTTCGAAAGTTTCGAACTCACTCACTTTCAGACAATCAATCAAACAATCAATCAATCTATCTATTTATTATAACATTCCAAAATTTAGAATTTTGGGATGATACA
>ID=gene:ENSRNA049477094;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=1813635;repeat_name=LTR_BB_64;repeat_type=LTRs::scaffold46362:52359-52435(+)
TTGGGAGCTGATGTCAAAGGAGTTATTCTTCACAATATTTCTCCGTGAAAAACCAATATCAGCAAATTGATTATGA
>ID=gene:ENSRNA049477073;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=280176;repeat_name=LTR_AY146588.1_283;repeat_type=LTRs::scaffold46362:66159-66317(+)
CTTTGTCAGTCAGGCCGCATAACAACATACGTTGTTCCCTTTGTCATCGGTATGTTACTTGCCCGAGATTCGATCGTCGGTATCCAATACCTAGTTCAATCTCGTTACCGGCAACTCTCTTTACTCATTCCGTAATACATCATCTCACAACTACCATA
>ID=gene:ENSRNA049476309;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=2223863;repeat_name=LTR_AC191802.2_8450;repeat_type=LTRs::scaffold59886:19291-19297(+)
GGGTTT
>ID=gene:ENSRNA049476178;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=826646;repeat_name=sabrina_115G1-1;repeat_type=LTRs::Pt:100049-100166(+)
TCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAATTTGGTGGTTAAACTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTGCGGCAAAATAGCTCGATGCCAGAA
>ID=gene:ENSRNA049475564;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=123064;repeat_name=RLC_Angela_3B_086_K02-1;repeat_type=LTRs::scaffold8181:109503-109538(-)
GGGTGACCTCCTGGGAAATCCTCGTGTTTGGGCGA
>ID=gene:ENSRNA049475286;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=378479;repeat_name=trep2261;repeat_type=LTRs::scaffold7710:60385-60583(+)
ATGGCAAAAGTGCAAAAGATAATAGGTTACAGACTTCGTGAAAATAACAAGTCAGGAAGTTAACATCAGGAAGAAATCTTTAGAGCAAGATAACAACATGTTACAGGAACATATCATGGCAAAGCAAGGCATGGCATGAAGCTACTCAAAGCATACAACAAAAGTCCCTTACTGAACATAAGCCAAAAGGGACCATAA
>ID=gene:ENSRNA049472837;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=1742937;repeat_name=trep3125;repeat_type=LTRs::scaffold2783:13790-13930(-)
AAAGGGTTTCATATCTACGGGTTGTGATAGGCTTGGCGAGCCAACGTAAAAACTAGCCAGTCTTTTGGGTATGAAACCCATTTGGGCGAGAGTAGTACTAGGATAGGTGACCTCCCGGGAAGTCCTCGTGAAAGGGTTTC
>ID=gene:ENSRNA049470086;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=1742951;repeat_name=trep3125;repeat_type=LTRs::scaffold266274:546-638(-)
AAAACTAGCCAGTCCCATGGGTATGAAACCCATTTGAGCGAGAGTAGTACTAGGTTGGGTGACCTCCTAGGAAGTCCTCATGAAAGGGTTTC
>ID=gene:ENSRNA049470081;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=1742951;repeat_name=trep3125;repeat_type=LTRs::scaffold266274:417-498(-)
AGTCCTTTAGATATGAAACTCATTTGGGTGAGAGTAGTAATAGGATGGGTGACCTCCTGGGAATTCCTCATGAAAGGGTTT
>ID=gene:ENSRNA049469632;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=276881;repeat_name=trep2218;repeat_type=LTRs::scaffold56160:15332-15462(-)
ACACGGATGTGATGCCTATGTTCATGATAATGCCTAGATATCATCATAACTATGCACTTTTCTATCAATTGCTCGGCAGTAATTTGTTCACCCACCGTAATATATGCTATCTTGAGAGAAGCCACTAGTG
>ID=gene:ENSRNA049469159;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=1268323;repeat_name=trep4000;repeat_type=LTRs::scaffold230516:2514-2664(+)
GTGTTGGATAAGTTTTCAAGTTTTGGGTAAAGATTCGATGGACTATGGAATAAGGAGTGGCAAGAGCCTAATCTTGGGGATGCCCAAGGCACCCCAAGGTAATATTCAAGGATAACCAAGAGCCTAAGCTTGGGGATGCCCCGGAAGGCA
>ID=gene:ENSRNA049469096;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=970571;repeat_name=RLG_WHAM_3B_034_D19-1;repeat_type=LTRs::scaffold19763:20708-20738(+)
GAGCAGGTATAGTTGGTATTCCCGGTTCTC
>ID=gene:ENSRNA049469082;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=949752;repeat_name=trep3264;repeat_type=LTRs::scaffold19763:18914-18939(+)
TCACATAATTCTTTTTGATGAAGCA
>ID=gene:ENSRNA049468553;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=1223157;repeat_name=DTC_Jorge_3B_104_M23-2;repeat_type=Type II Transposons::C165959669:445-480(+)
AGTGGCCGGAAGACTAGTCACAATGGGGAGTAACT
>ID=gene:ENSRNA049466973;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=826934;repeat_name=sabrina_115G1-1;repeat_type=LTRs::scaffold313966:1136-1253(+)
TCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAACTCTACTGCGGTGACGATACTGTAGGGGGGGTCCTGCGGAAAAATAGCTCGACGCCAGGA
>ID=gene:ENSRNA049466434;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=1742944;repeat_name=trep3125;repeat_type=LTRs::scaffold143217:211-303(+)
AAACTAGCCAGTCCATTGGGTATGAAACCCATTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCCGGGAAGTCCTCGTGAAAGGGTTTCA
>ID=gene:ENSRNA049466426;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=1742943;repeat_name=trep3125;repeat_type=LTRs::scaffold143217:26-118(+)
AAAACTAGCCAATCCCATGGGTATGAAACCCATTTGAGCGAGAATAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGAAAGGGTTTC
>ID=gene:ENSRNA049475599;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=135508;repeat_name=LTR_DQ537337.1_386;repeat_type=LTRs::scaffold8181:85670-85673(-)
GGA
>ID=gene:ENSRNA049475028;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=837948;repeat_name=LTR_AC207908.1_112;repeat_type=LTRs::scaffold14860:1131-1181(+)
TGAGGGAATCCTGGATTAGGGGGTATCCGGACAGCCGGACTATATCCTTT
>ID=gene:ENSRNA049471520;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=198500;repeat_name=LTR_AC216564.1_197;repeat_type=LTRs::scaffold3044:47086-47111(+)
GAGGGAGCAGCATTAACATCCTATA
>ID=gene:ENSRNA049481516;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=2151398;repeat_name=trep4213;repeat_type=LTRs::scaffold126243:26069-26074(+)
GGTGG
>ID=gene:ENSRNA049481789;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=1156109;repeat_name=LTR_AC200778.1_18;repeat_type=LTRs::scaffold115035:1249-1275(+)
GCCACTTAGTGATTTTCTCGAGGAAC
>ID=gene:ENSRNA049481823;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=2246131;repeat_name=trep1080;repeat_type=Type II Transposons::scaffold224674:90-91(+)
T
>ID=gene:ENSRNA049482199;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=826994;repeat_name=sabrina_115G1-1;repeat_type=LTRs::scaffold267612:307-424(+)
TCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAATTTGGTGGTTAAACTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTGCGGCAAAATAGCTCGATGCCAGAA
>ID=gene:ENSRNA049482336;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=281720;repeat_name=LTR_AY146588.1_283;repeat_type=LTRs::scaffold74522:5474-5526(+)
CACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAATTACTGCGTTCCCC
>ID=gene:ENSRNA049434885;Name=tRNA-Asp;biotype=tRNA;description=tRNA-Asp for anticodon GUC overlaps with ID=2228681;repeat_name=LTR_AC190975.3_7128;repeat_type=LTRs::C161820272:16-90(-)
GGAGTGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGTCCCGTCCACTCCG
>ID=gene:ENSRNA049435368;Name=tRNA-Ile;biotype=tRNA;description=tRNA-Ile for anticodon GAU overlaps with ID=2246046;repeat_name=LTR_AC191363.2_7835;repeat_type=LTRs::scaffold331952:114-188(-)
GGGCCCGTAGCTCAGTTGGTTAGAGCACACGCTTGATAAGCGTGGGGTCGGTAGTTCGAGTCTACCCGGGCCCA
>ID=gene:ENSRNA049435577;Name=tRNA-Ile;biotype=tRNA;description=tRNA-Ile for anticodon AAU overlaps with ID=2243055;repeat_name=LTR_Al_scaffold_0002_362;repeat_type=LTRs::Scaffold332218:215-289(-)
GGTCGATTAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGCCGTGGGTTCGACCCCCATATTGACCA
>ID=gene:ENSRNA049435916;Name=tRNA-Ile;biotype=tRNA;description=tRNA-Ile for anticodon GAU overlaps with ID=2239731;repeat_name=LTR_Mt_chr_05_619;repeat_type=LTRs::scaffold197717:2765-2839(-)
GGGCTTGTAGCTCAGTTGGTTAGAGCACACGCTTGATAAGCGTGGGGTCGGAGGTTCAAGTCCTCCCAGGCCCA
>ID=gene:ENSRNA049436517;Name=tRNA-Met;biotype=tRNA;description=tRNA-Met for anticodon CAU overlaps with ID=2243048;repeat_name=LTR_Al_scaffold_0002_362;repeat_type=LTRs::scaffold120790:12058-12132(+)
GGCTACTTAGCTCAGCTGGTTAGAGCACAGCACTCATAATGCTGGGGTCACAGGTTCGATTCCCGTAGTAGCCA
>ID=gene:ENSRNA049438931;Name=tRNA-Ile;biotype=tRNA;description=tRNA-Ile for anticodon GAU overlaps with ID=2243049;repeat_name=LTR_Al_scaffold_0002_362;repeat_type=LTRs::scaffold123404:2215-2289(-)
AGTCCTGTAGCTCAGCTGGTTAGAGCGCTGGTCCGATGTACCAGAAGTCACGGGTTCAATCCCCGTCGGGACTA
>ID=gene:ENSRNA049442501;Name=tRNA-Asp;biotype=tRNA;description=tRNA-Asp for anticodon GUC overlaps with ID=2242308;repeat_name=LTR_HVVMRXALLrA0187C04_ipk26_c1_3894;repeat_type=LTRs::scaffold54566:36188-36260(+)
GTCGTTGTAGTATAGTGGTAAGTATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCCCCGGCAACGGCG
>ID=gene:ENSRNA049445113;Name=tRNA-Ser;biotype=tRNA;description=tRNA-Ser for anticodon AGA overlaps with ID=2236308;repeat_name=LTR_Al_scaffold_0001_223;repeat_type=LTRs::scaffold88609:54248-54330(-)
GTGGTCGTGCCGGAGTGGTTATCGGGCATGACTAGAAATCATGTGGGCTTTGCCCGCGCAGGTTCGAATCCTGCCGACCACG
>ID=gene:ENSRNA049445229;Name=tRNA-Asn;biotype=tRNA;description=tRNA-Asn for anticodon GUU overlaps with ID=2239730;repeat_name=LTR_Mt_chr_05_619;repeat_type=LTRs::scaffold55701:41936-42010(+)
GCTGGAGTAGCTCAGTTGGTTAGAGCGTGTGGCTGTTAACCATAAGGTCGGAGGTTCGAGCCCTCCTTCTAGCG
>ID=gene:ENSRNA049444805;Name=tRNA-Asn;biotype=tRNA;description=tRNA-Asn for anticodon GUU overlaps with ID=2239729;repeat_name=LTR_Mt_chr_05_619;repeat_type=LTRs::scaffold16073:6059-6133(+)
GCTGGAATAGCTCAGTTGGCTAGAGCGTGTGGCTGTTAACCACAAGGTCGGAGGTTCAAGACCTCCTTCTAGTG
>ID=gene:ENSRNA049445001;Name=tRNA-Thr;biotype=tRNA;description=tRNA-Thr for anticodon UGU overlaps with ID=2079991;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::scaffold262405:19228-19301(+)
GCCCGCTTAGCTCAGAGGTTAGAGCATCGCATTTGTAATGCGATGGTCATCGGTTCGATTCCGATAGCCGGCT
>ID=gene:ENSRNA049445006;Name=tRNA-Trp;biotype=tRNA;description=tRNA-Trp for anticodon CCA overlaps with ID=2236355;repeat_name=LTR_AC191345.3_7798;repeat_type=LTRs::scaffold262405:87-161(+)
GCGCTCTTAGTTCAGTTCGGTAGAACGTGGGTCTCCAAAACCCAATGTCGTAGGTTCAAATCCTACAGGGCGTG
>ID=gene:ENSRNA049446363;Name=tRNA-Asp;biotype=tRNA;description=tRNA-Asp for anticodon GUC overlaps with ID=2225741;repeat_name=LTR_Gr_chr_11_2758;repeat_type=LTRs::scaffold152738:32900-32972(-)
GTCGTTGTAGTATAGTGGTAAGTATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCCCCGGCAACGGCG
>ID=gene:ENSRNA049448644;Name=tRNA-Trp;biotype=tRNA;description=tRNA-Trp for anticodon CCA overlaps with ID=2236353;repeat_name=LTR_AC191345.3_7798;repeat_type=LTRs::Pt:64147-64221(-)
GCGCTCTTAGTTCAGTTCGGTAGAACGCGGGTCTCCAAAACCCGATGTCGTAGGTTCAAATCCTACAGAGCGTG
>ID=gene:ENSRNA049450259;Name=tRNA-Asp;biotype=tRNA;description=tRNA-Asp for anticodon GUC overlaps with ID=2225739;repeat_name=LTR_Gr_chr_11_2758;repeat_type=LTRs::scaffold64139:91286-91358(+)
GTCGTTGTAGTATAGTGGTAAGTATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCCCCGGCAACGGCG
>ID=gene:ENSRNA049450269;Name=tRNA-Asp;biotype=tRNA;description=tRNA-Asp for anticodon GUC overlaps with ID=2225738;repeat_name=LTR_Gr_chr_11_2758;repeat_type=LTRs::scaffold64139:70794-70866(+)
GTCGTTGTAGTATAGTGGTAAGTATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCCCCGGCAACGGCG
>ID=gene:ENSRNA049464611;Name=mir-166;biotype=pre_miRNA;description=mir-166 microRNA precursor overlaps with ID=1984810;repeat_name=RLG_Cereba_3B_100_L17-2;repeat_type=LTRs::C160178054:31-110(-)
TCGTTTAGACTTTGGGTTTTGTTTAGATTAAAAGTTCGCCATAGCTGCAACTTCATGCGTGTTCTTGCTCCAATGTTCA
>ID=gene:ENSRNA049482227;Name=MIR169_2;biotype=pre_miRNA;description=microRNA MIR169_2 overlaps with ID=1090213;repeat_name=LTR_AC200770.1_9;repeat_type=LTRs::scaffold296525:1279-1329(+)
CAGACTATATGATTTTGTAGGCATAACTTTCTTTGGCCATTTTATTTTGT
>ID=gene:ENSRNA049482227;Name=MIR169_2;biotype=pre_miRNA;description=microRNA MIR169_2 overlaps with ID=1787426;repeat_name=LTR_AC200785.1_25;repeat_type=LTRs::scaffold296525:1223-1280(+)
AAAATAACATGGCCAAAGAAAGTTATGCCTACAAAATCATATAGTCTGGCTATGCTC
>ID=gene:ENSRNA049482227;Name=MIR169_2;biotype=pre_miRNA;description=microRNA MIR169_2 overlaps with ID=2043378;repeat_name=RLG_Sabrina_3B_058_I14-1;repeat_type=LTRs::scaffold296525:1282-1329(+)
ACTATATGATTTTGTAGGCATAACTTTCTTTGGCCATTTTATTTTGT
>ID=gene:ENSRNA049481165;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=2242294;repeat_name=LTR_AC198290.2_10424;repeat_type=LTRs::scaffold272459:24397-24501(+)
TAATGTGGTAGGCATAGCGTGAGGCTGGCTTCACAGAGCAGCGACAACTGCCCGCTTCCAACGGTGGAAGGATAACGGTCCGCTGCACTCCTAGGCCACTTGGG
>ID=gene:ENSRNA049481162;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=2220451;repeat_name=trep2292;repeat_type=Type II Transposons::scaffold272459:24002-24064(+)
CTCCATTTCAAAATAGTGAAGTTTTAAGGTTTGTCCTAAGTCAAAACTAGTTTAAGTTTAAC
>ID=gene:ENSRNA049481162;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=2242292;repeat_name=LTR_AC198290.2_10424;repeat_type=LTRs::scaffold272459:23858-23939(+)
GCCGAGCTCAGTTGCGTGAGCTTGTAACCTGAGCGGGGGCATTAAGGTGATGTGGATGCTGTTATAGTGCTGCGGGCCTGG
>ID=gene:ENSRNA049481162;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=2242293;repeat_name=LTR_AC198290.2_10424;repeat_type=LTRs::scaffold272459:24106-24210(+)
TAATGTGGTAGGCATAGCGTGAGGCTGGCTTCACAGAGCAGCGACAACTGCCCGCTTCCAACGGTGGAAGGATAACGGTCCGCTGCACTCCTAGGCCACTTGGG
>ID=gene:ENSRNA049481157;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=2242291;repeat_name=LTR_AC198290.2_10424;repeat_type=LTRs::scaffold272459:18236-18540(+)
GCCGAGCTCAGTTGCGAGAGCTTGTAATCCGAATGGGGGCATTAAGATGATGTGGACGCTGTTGTAGTGTTGCGGGCCTGGTCTGGGTGTGCTACTGCTGGCCTGCCCGTTCCAAGTTGTGTAGTGGGCCGCTTGGGGCCTATGCGAAAGCTGGGCCTCACGGTCCATAATGTGGGAGGCACAGCGTGAGGCTGGCTTCACAGAGCAGCGACAACTGCCCGCTTCCAACGGTGGAAGGATAACAGGCCGCTGCACTCCTTGGCCGCTTGGGCCTCGCAGCCTACTCTAGTGGACCATCACTTTT
>ID=gene:ENSRNA049480668;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=2242298;repeat_name=LTR_AC198290.2_10424;repeat_type=LTRs::scaffold266909:130-177(-)
GGCAGGCACAGCGTGAGGCTGGCTTCACAGAGCAGCGACAACTGCCC
>ID=gene:ENSRNA049478953;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=1691900;repeat_name=RLG_Cereba_3B_100_L17-4;repeat_type=LTRs::scaffold45912:68135-68338(+)
TGATAGAGGCTAAGGTGTCTCGATGTTTCGATGAGATGGTGGCTATCGTTTTCTGTGGGAGTCGACCTTGACGATCCGACTAGGAACGTGCGAGACGTCGCGCCTTAGCAATCGCTAAACCAACTTCCGAGGGTTATTGACCACGCCGGAGCACGATCAACCTGACCACGAGGGTCTGTTTCCTGCAAGCAAACGAAGAACAA
>ID=gene:ENSRNA049478954;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=1691901;repeat_name=RLG_Cereba_3B_100_L17-4;repeat_type=LTRs::scaffold45912:75440-75451(+)
TGTCCTCATCA
>ID=gene:ENSRNA049476431;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=1958108;repeat_name=RLC_Angela_3B_028_F08-1;repeat_type=LTRs::scaffold63806:65758-65913(-)
GTGGAGCCTTGGGGTCGAAACTTGGAGTAAACGCCTCCACAAAGTCGGTTTCACCCGAAAGGCAAGAGTCCTTCTCGGACTCCAGGGCCAGACGCCAGGGTTCCCGGCATCTGGACCCAGACGCCAGGAACCCTGGCGTCTGGCCCTGGAGTTCG
>ID=gene:ENSRNA049476431;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=2023715;repeat_name=LTR_BA_57;repeat_type=LTRs::scaffold63806:65720-65838(-)
CGGACTCCAGGGCCAGACGCCAGGGTTCCCGGCATCTGGACCCAGACGCCAGGAACCCTGGCGTCTGGCCCTGGAGTTCGAGAAGGACTCTTGCCTTTCGGGTGAAACCGACTTTGTG
>ID=gene:ENSRNA049465980;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=2242302;repeat_name=LTR_AC198290.2_10424;repeat_type=LTRs::scaffold269942:358-579(+)
GCCGAGCTCAGTTGCGAGAGCTTGTAACCCGAGTGGGGGCATTAAAGTGATGTGGCCTATGCGAAAGCTGGGCCTCACGGTCCATAAGGTGGCAGGCACAGCGTGAGGCTGGCTTCACAGAGCAGCGACAACTGCCCACTTCCAACGGTGGAAGGATAACGAGCCGCTGCACTCTTAGGTCGCTTGGGCCTCGCAGCCTACTCCAGTGAACCATCATTTTT
>ID=gene:ENSRNA049482044;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=2242300;repeat_name=LTR_AC198290.2_10424;repeat_type=LTRs::C165529494:96-317(-)
GCCGAGCTCAGTTGCGAGAGCTTGTAACCCGAGTGGGGGCATTAAAGTGATGTGGCCTATGCGAAAGCTGGGCCTCACGGTCCATAAGGTGGCAGGCACAGCGTGAGGCTGTCTTCACATAGCAGCGACAACTGCCCACTTCCAACGGTGGAAGGATAACGAGCCGCTGCACTCTTAGGTCGCTTGGGCCTCGCAGCCTACTTCAGCGAACCATCATTTTC
>ID=gene:ENSRNA049482044;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=2244407;repeat_name=trep4397;repeat_type=Type II Transposons::C165529494:312-317(-)
GCCGA
>ID=gene:ENSRNA049482587;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=2242296;repeat_name=LTR_AC198290.2_10424;repeat_type=LTRs::scaffold37154:1750-2054(-)
GATGAGCTCAGTTGCGAGAGCTTGTAACCCGAGTGGGGGCATTAAAGTGATGTGGACGCTGTTGTAGCGCTGCGGGCCTGGTCTGGATATGTTACTGCTGGCCTGCCCGTTCCAAGTTGCGTAGTGGACCGGCTGAGGCCTATGCGAAAGCTGGGCCTCACGGTCCATAATGTGGCAGGCACAGCGTGAGGCTGGCTTCACAGAGCAGCGACAACTGCCCACTTCCAACGGTGGAAGGATAACGAGCCGCTGCACTCTTAGGCTGCTTGGGCCTCGCAGGCTACTTCAGCGAACCATCATTTTC
>ID=gene:ENSRNA049479204;Name=Plant_U3;biotype=snoRNA;description=Plant small nucleolar RNA U3 overlaps with ID=1010707;repeat_name=LTR_EF081026.1_411;repeat_type=LTRs::scaffold41364:119800-119855(+)
TCGACCGTAAGTACCGTACCGACGACTTGTCCTGTGGCTGCAATGTAGGCAAGCA
>ID=gene:ENSRNA049475130;Name=Plant_U3;biotype=snoRNA;description=Plant small nucleolar RNA U3 overlaps with ID=1013257;repeat_name=LTR_EF081026.1_411;repeat_type=LTRs::scaffold81323:849-974(-)
ACAAGTTCCACTCGAACAAGATCTATTCTATAGGCTCGTACCGCTACATCCTTTATCAATAAGCAGGCGAGCACATTCAGAAGATAAACCAAGTTCGAATAAATCTTAAAGTTCCAGAATGAAGA
>ID=gene:ENSRNA049467665;Name=SNORD36;biotype=snoRNA;description=Small nucleolar RNA SNORD36 overlaps with ID=2239834;repeat_name=trep4066;repeat_type=Type II Transposons::scaffold171052:616-700(-)
GAGCATATGATGTTACAAGGAGATGCTACTGAGATTTTACGCCGTTGAAGTATCTTAAACCGAGCTTTTTAAAACTGATGCTTG
>ID=gene:ENSRNA049467652;Name=SNORD36;biotype=snoRNA;description=Small nucleolar RNA SNORD36 overlaps with ID=2239834;repeat_name=trep4066;repeat_type=Type II Transposons::scaffold171052:796-881(-)
GGGCAGAGGATGTGAAACATTTAGACCGCCGAGGCCTTTCCGGTCTTTGATGATCTAAAATTGAGCCTTTTAAAACTGATGCCTA
>ID=gene:ENSRNA049467499;Name=Plant_U3;biotype=snoRNA;description=Plant small nucleolar RNA U3 overlaps with ID=389227;repeat_name=LTR_EF081030.1_418;repeat_type=LTRs::scaffold2064:6611-6661(-)
AACTATTCAGACCCCGGCCAACTCTCAGCAGTCGACCGTGGTCTCGGGGA
>ID=gene:ENSRNA049474459;Name=snoZ103;biotype=snoRNA;description=Small nucleolar RNA Z103 overlaps with ID=1345290;repeat_name=trep1401;repeat_type=LTRs::scaffold58968:61104-61120(-)
CAAGGCTCTGATCTGC
>ID=gene:ENSRNA049482826;Name=SNORD36;biotype=snoRNA;description=Small nucleolar RNA SNORD36 overlaps with ID=2239822;repeat_name=trep4066;repeat_type=Type II Transposons::scaffold85814:4516-4600(+)
GAGCATATGATGTTACAAGGAGATGCTACTGAGATTTTACGCCGTTGAAGTATCTTAAACCGAGCTTTTTAAAACTGATGCTTG
>ID=gene:ENSRNA049482829;Name=SNORD36;biotype=snoRNA;description=Small nucleolar RNA SNORD36 overlaps with ID=2239822;repeat_name=trep4066;repeat_type=Type II Transposons::scaffold85814:4333-4418(+)
GGGCAGAGGATGTGAAACATTTAGACCGTTGAGGCCTTTCCAGTCTTTGATGATCTAAAATTGAGCTTTTTAAAACTGATGCCTA
>ID=gene:ENSRNA049470420;Name=IsrR;biotype=antisense_RNA;description=Antisense RNA which regulates isiA expression overlaps with ID=2236242;repeat_name=LTR_Gr_chr_04_953;repeat_type=LTRs::scaffold262405:31459-31646(+)
AATAACCAAATATAACACTTGGGCTAAGAGTCAGGTTGGTAATTTTTCTTACGTCCCCCCCCCCTGGAGCCCAGGTATCATATATGCCCCCAAAATAAAGAGCCTTGAATACTAGAAGGAAAGCACCTATACCTAACAAGATTAAGTGAATACCCAAAATTGTTGTCATTTTATTTCTATCTTTCCA
>ID=gene:ENSRNA049476262;Name=IsrR;biotype=antisense_RNA;description=Antisense RNA which regulates isiA expression overlaps with ID=2236241;repeat_name=LTR_Gr_chr_04_953;repeat_type=LTRs::Pt:10125-10312(-)
AATAACCAAATATAACACTGGGACTAAGGGTCAAATTGGTAATTTTTCTTACATCTCCCCCCCCAGGGGCCCAGGTATCATATACACCGCCAAAATAAAGAGCCTTGAGTACTAGAAGAAAAGCACCTAGACCTAACAAAATTAAGTGAATACCCAAAATTGTAGTCATTTTATTTCTATCTTTCCA
>ID=gene:ENSRNA049481785;Name=IsrR;biotype=antisense_RNA;description=Antisense RNA which regulates isiA expression overlaps with ID=2236243;repeat_name=LTR_Gr_chr_04_953;repeat_type=LTRs::scaffold129696:468-654(-)
AATAACCAAATATAACACTGGGACTTAGGGTCAAATTGGTAATTTTTCTTACATCTCCCCCCCAGGGGCACAGGTATCATATACACCGCCAAAATAAAGAGCCTTGAGTACTAGAAGAAAAGCACCTAGACCTAACAAAATTAAGTGAATACCCAAAATTGTAGTCATTTTATTTCTATCTTTCCA
>ID=gene:ENSRNA049480627;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2243553;repeat_name=RLG_Gk_DX403759.1_7620;repeat_type=LTRs::scaffold66293:810-884(-)
GAAAGCAGTATTCGATGAAAGTCGTATGTATGGCTTGGAGGGAGATCTTTCCTATCTTTCGAGATCCACCCTAC
>ID=gene:ENSRNA049480705;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080283;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold62964:376-453(+)
AGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTGTAAAGGGACAGTAAGGGTGACTTATCTGTCGACTTTTCC
>ID=gene:ENSRNA049480763;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080123;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::scaffold17762:1407-1490(-)
GAGAGCCAAATGAATCGAATGGTTCATGTTTGGTTCAGGAAGAGATCATAAAAGTTGTAAACTTACAAAATATCTACTTTCAT
>ID=gene:ENSRNA049480839;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080281;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::C163240052:76-131(-)
GAAAGCCGTATTCGATGAAAGTCGTATGTACAGCTTGGAGGGAGATCTTTCCTAT
>ID=gene:ENSRNA049480455;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080033;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::scaffold51505:14253-14337(+)
GAGAGCCAAATGAATCGAAAGATTCATGTTTGGTTCGGGAAGAGATCATAAAAGTTGTAAACTTACAAAATAATCTACTTTCAT
>ID=gene:ENSRNA049480362;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080244;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold60970:7329-7409(+)
AAGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGCATGAGAGACATAAGCGAGGAATCCTCTTTTTGACTCCGAGT
>ID=gene:ENSRNA049480397;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080240;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold57091:14707-14781(-)
GAAAGCCGTATTCGATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCCTATCTTTCGAGATCCACCCTAC
>ID=gene:ENSRNA049480400;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080240;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold57091:15478-15555(-)
AGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTGTAAAGGGACAGTAAGGGTGACTTATCTGTCGACTTTTCC
>ID=gene:ENSRNA049480228;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080222;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold13638:45324-45398(+)
GAAAGCCATATTCGATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCCTATCTTTCGAGATCCACCCTAC
>ID=gene:ENSRNA049480233;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080222;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold13638:47654-47683(+)
AGGAGCCGTGCGAGATGAAAGTCTCATGC
>ID=gene:ENSRNA049480233;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=1987772;repeat_name=trep4230;repeat_type=LTRs::scaffold13638:47683-47802(+)
ACGGTTTTGCATGAGAGAAAGAAGCGAGGAATTGATGAGGACATGACTACCTTGGATACGACCAAAAATATTGCATACATGCATATTTGTCAGGTGATTTCTAGTGCAAACTATTCAAT
>ID=gene:ENSRNA049480001;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080316;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold308820:489-524(-)
GGAGCCGTATGAGGCGAGAGTCTCACGTACGGTTC
>ID=gene:ENSRNA049480001;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080363;repeat_name=RXX_Gk_DX403548.1_7560;repeat_type=Unknown::scaffold308820:490-525(-)
CGGAGCCGTATGAGGCGAGAGTCTCACGTACGGTT
>ID=gene:ENSRNA049479756;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080024;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::scaffold55668:58321-58385(+)
CTGAGCCGTATGAGGTAGGAAACTCTCAAGTACGGTTCTAAGGGAAGGAACTTCCTATTCCGAC
>ID=gene:ENSRNA049479475;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2243401;repeat_name=LTR_Gm_16_5235;repeat_type=LTRs::scaffold181218:16591-16613(-)
AGGAGCTGGATGAGAAGAAACT
>ID=gene:ENSRNA049479480;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2225247;repeat_name=LTR_Os_chr_11_2029;repeat_type=LTRs::scaffold181218:10410-10470(+)
TTGAGCCGTACGAGATGAAATTTTCATATACGGCTCTTAGAGGGGGACTCGGGTTAGTTA
>ID=gene:ENSRNA049479460;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080249;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold181218:6305-6384(-)
AGGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGCATGAGAGAAAGAAGCGAGGAATCCTCTTTTCGACTCTGAC
>ID=gene:ENSRNA049478740;Name=Intron_gpI;biotype=sense_intronic;description=Group I catalytic intron overlaps with ID=1406148;repeat_name=RLG_Jeli_3B_011_O13-1;repeat_type=LTRs::scaffold11598:74463-74577(+)
GGTGCAGAGACTCAATGGAAGTTGTTCTAATGAATCGAGTTAATTACATTGTGTTGTTAGTAAGCCCCCGAGTGGGAGGATTGCGCTCCACTCGGTAGGATTTTTTAAACTTAG
>ID=gene:ENSRNA049478740;Name=Intron_gpI;biotype=sense_intronic;description=Group I catalytic intron overlaps with ID=677923;repeat_name=LTR_AC200833.1_85;repeat_type=LTRs::scaffold11598:74523-74577(+)
TAAGCCCCCGAGTGGGAGGATTGCGCTCCACTCGGTAGGATTTTTTAAACTTAG
>ID=gene:ENSRNA049478736;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080201;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold37941:89281-89360(-)
AGGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGCATGAGAGAAAGAAGCGAGGAATCCACTTTTCAACTCTGAC
>ID=gene:ENSRNA049478435;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2079964;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::scaffold42848:28496-28580(+)
GAGAGCCAAATGAATCGAAAGATTCATGTTTGGTTCGGGAAGAGATCATAAAAGTTGTAAACTTACAAAATAATCTACTTTCAT
>ID=gene:ENSRNA049478361;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080190;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold7104:121927-122006(+)
AGAAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGCATGAGAGAAAGAAGCGAGGAATCCTATTTTCGACTCTGAC
>ID=gene:ENSRNA049478370;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080190;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold7104:118824-118901(+)
AGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTGTAAAGGGACAGTAAGGGTGACTTATCTGTCGACTTTTCC
>ID=gene:ENSRNA049478357;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080189;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold7104:77181-77260(-)
AGGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGCATGAGAGAAAGAAGCGAGGAATCCTCTTTTCGACTCTGAC
>ID=gene:ENSRNA049478235;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080194;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold61763:21376-21455(-)
AGGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGCATGAGAGAAAGAAGCGAGGAATCCTCTTTTCGACTCTGAC
>ID=gene:ENSRNA049477954;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080278;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold15169:34028-34102(+)
GAAAGCCGTATTCGATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCCTATCTTTCGAGATCCACCCTAC
>ID=gene:ENSRNA049477946;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080278;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold15169:36364-36443(+)
AGGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGCATGAGAGAAAGAAGCGAGGAATCCTCTTTTCGACTCTGAC
>ID=gene:ENSRNA049477950;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080278;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold15169:33253-33330(+)
AGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTGTAAAGGGACAGTAAGGGTGACTTATCTGTCGACTTTTCC
>ID=gene:ENSRNA049477910;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2079965;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::scaffold17509:14893-14968(+)
AGGAGCCGTATGAGATGAAAACCTCATGTACGGTTTTGGAACGGAGATTTTTTGAATAGAATGAACGACCGTAAC
>ID=gene:ENSRNA049476244;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2079984;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::Pt:33766-33850(+)
GAGAGCCAAATGAATCGAAAGATTCATGTTTGGTTCGGGAAGAGATCATAAAAGTTGTAAACTTACAAAATAATCTACTTTCAT
>ID=gene:ENSRNA049476250;Name=Intron_gpI;biotype=sense_intronic;description=Group I catalytic intron overlaps with ID=2236296;repeat_name=LTR_AC188734.2_15331;repeat_type=LTRs::Pt:46703-46909(+)
CTACGGACTTGATTGTATTGAGCCTTGGTATGGAAACCTGCTAAGTGGTAACTTCCAAATTCAGAGAAACCCTGGAATTAAAAAAGGGCAATCCTGAGCCAAATCCGTGTTTTGAGAAAACAAGGGGTTCTCGAACTAGAATACAAAGGAAAAGGATAGGTGCAGAGACTCAATGGAAGCTGTTCTAACGAATCGAGTTAATTACG
>ID=gene:ENSRNA049476227;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080211;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Pt:90178-90252(-)
GAAAGCCGTATTCGATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCCTATCTTTCGAGATCCACCCTAC
>ID=gene:ENSRNA049476212;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080211;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Pt:90950-91027(-)
AGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTGTAAAGGGACAGTAAGGGTGACTTATCTGTCGACTTTTCC
>ID=gene:ENSRNA049476195;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080211;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::Pt:87837-87916(-)
AGGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGCATGAGAGAAAGAAGCGAGGAATCCTCTTTTCGACTCTGAC
>ID=gene:ENSRNA049476170;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2079985;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::Pt:43186-43261(-)
AGGAGCCGTATGAGATGAAAACCTCATGTACGGTTTTGGAACGGAGATTTTTTGAATAGAATGAACGACCGTAAC
>ID=gene:ENSRNA049476066;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080219;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold57854:941-1015(+)
GAAAGTTGTATTCGATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCCTATCTTTCGAGATCCACCCTAC
>ID=gene:ENSRNA049474688;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2079987;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::scaffold38997:722-797(+)
AGGAGCCGTATGAGATGAAAACCTCATGTACGGTTTTGGAACGGAGATTTTTTGAATAGAATGAACGACCGTAAC
>ID=gene:ENSRNA049472955;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=1065197;repeat_name=trep3456;repeat_type=LTRs::scaffold13086:6158-6185(+)
CTTTCCTAAGTTGCTTTCTACTCAAAT
>ID=gene:ENSRNA049470404;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2079997;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::scaffold262405:54794-54882(+)
GAGAGCCAAATGAATCGAAAGATTCATGTTTGGTTCGGGAAGGGATCATGGAAATTTTGAAATGAATGGAAAGATAATCTACTTTCAT
>ID=gene:ENSRNA049470395;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2079993;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::scaffold262405:22115-22189(+)
AGGAGCCGTATGAGATGCAAATCTCACGTACGGTTCTGGAACGGAGATTCCTTGAATCGAATGACGACCGTAAC
>ID=gene:ENSRNA049470380;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2079993;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::scaffold262405:23047-23116(+)
CCGAGCCGTATGAGGCAGGAAACTCTCAAGTACGGTTCTAAGGGAAGGAAATTACCCGCCTATTCCGAC
>ID=gene:ENSRNA049470046;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080204;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold41570:26646-26720(+)
GAAAGCCGTATTCGATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCCTATCTTTCGAGATCCACCCTAC
>ID=gene:ENSRNA049470018;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080204;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold41570:28982-29061(+)
AGGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGCATGAGAGAAAGAAGCGAGGAATCCTCTTTTCGACTCTGAC
>ID=gene:ENSRNA049469355;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080289;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::C161444524:155-234(+)
AGGAGCCGTGTGAGATGATAGTCTCATGCACGGTTTTGCATGAGAGAAAGAAGCGAGGAATCCTCTTTTCGACTCTGAC
>ID=gene:ENSRNA049468657;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080136;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::scaffold60938:49930-50014(+)
GAGAGCCAAATGAATCGAAAGATTCATGTTTGGTTCGGGAAGAGATCATAAAAGTTGTAAACTTACAAAATAATCTACTTTCAT
>ID=gene:ENSRNA049467623;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080285;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold299005:895-972(-)
AGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTGTAAAGGGACAGTAAGGGTGACTTATCTGTCGACTTTTCC
>ID=gene:ENSRNA049467002;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080293;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::C159299885:78-113(+)
GGAGCCGTATGAGGCGAGAGTCTCACGTATGGTTC
>ID=gene:ENSRNA049465147;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2005972;repeat_name=RLG_Sabrina_3B_033_P03-1;repeat_type=LTRs::scaffold29891:63671-63690(+)
CGTTCCATTTGGACTCCAT
>ID=gene:ENSRNA049461255;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=1768467;repeat_name=RLC_Angela_3B_061_J17-1;repeat_type=LTRs::C164268436:29-82(-)
ACTGAAGGAAATATGCCCGAGAGGAAATAATAAAGTTGTTATTTATATTTCCT
>ID=gene:ENSRNA049461005;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080217;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold104576:59816-59895(-)
AGGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGCATGAGAGAAAGAAGCGAGGAATCCTCTTTTCGACTCTGAC
>ID=gene:ENSRNA049476161;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080352;repeat_name=RXX_Gk_DX403548.1_7560;repeat_type=Unknown::Pt:113222-113300(-)
AGAAGCCGTATGAAGCTAAGGTTTCATGTACGGTTTTGAAATAGCGGTGGGAACTGTGATGTTATCACCGACTATGAT
>ID=gene:ENSRNA049476070;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080219;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold57854:167-244(+)
AGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTGTAAAGGGACAGTAAGGGTGACTTATCTGTCGACTTTTCC
>ID=gene:ENSRNA049473417;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080017;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::scaffold60627:378-462(-)
GAGAGCCAAATGAATCGAAAGATTCATGTTTGGTTCGGGAAGAGATCATAAAAGTTGTAAACTTACAAAATAATCTACTTTCAT
>ID=gene:ENSRNA049473409;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080019;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::scaffold60627:4259-4334(-)
GGGAGCCGTATGAGATGAAAACCTCATGTACGGTTTTGGAACGGAGATTTTTTGAATAGAATGAACGACCGTAAC
>ID=gene:ENSRNA049473055;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080221;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold67600:14766-14843(-)
AGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTGTAAAGGGACAGTAAGGGTGACTTATCTGTCGACTTTTCC
>ID=gene:ENSRNA049481510;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080251;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold95777:2421-2463(-)
AGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTGTAGA
>ID=gene:ENSRNA049481618;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080241;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold114754:27383-27460(+)
AGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTGTAAAGGGACAGTAAGGGTGACTTATCTGTCGACTTTTCC
>ID=gene:ENSRNA049481653;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080030;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::scaffold66810:5988-6052(-)
CTGAGCCGTATGAGGTAGGAAACTCTCAAGTACGGTTCTAAGGGAAGGAACTTCCTATTCCGAC
>ID=gene:ENSRNA049481737;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080261;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold46877:11707-11781(-)
GAAAGCCGTATTCGATGAAAGTCGTATGTACGGCTTGGGGGGAGATCTTTCCTATCTTTCGAGATCCACCCTAC
>ID=gene:ENSRNA049481782;Name=Intron_gpI;biotype=sense_intronic;description=Group I catalytic intron overlaps with ID=2221894;repeat_name=DTC_unnamedfam25_3B_058_I14-1;repeat_type=Type II Transposons::scaffold285665:1210-1244(-)
ATACCAACATCTTTTCTGATTTTTTGGTCACCCA
>ID=gene:ENSRNA049481914;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=929379;repeat_name=DTC_Jorge_3B_034_E06-2;repeat_type=Type II Transposons::scaffold47324:4518-4569(-)
GGGCTCGTGTCCTTCGGTGGCGTGCATGGTACGCACATTAGGCAACCCCAT
>ID=gene:ENSRNA049481914;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2243550;repeat_name=RLG_Gk_DX403759.1_7620;repeat_type=LTRs::scaffold47324:4553-4611(-)
GAAAGCCGTATTCGATGAAAGTCGTATGTACGGCTTGGAGGGGGGCTCGTGTCCTTCG
>ID=gene:ENSRNA049482140;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080227;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold106582:31186-31265(+)
AGGAGTCGTGTGAGATGAAAGTCTCATGCACGGTTTTGCATGGGAGAAAGAAGCGAGGAATCCTCTTTTCGACTCTGAC
>ID=gene:ENSRNA049482406;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080228;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold165368:1608-1685(-)
AGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTGTAAAGGGACAGTAAGGGTGACTTATCTGTCGACTTTTCC
>ID=gene:ENSRNA049482499;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080074;repeat_name=LTR_Os_chr_04_669;repeat_type=LTRs::scaffold17504:39388-39472(-)
GAGAGCCAAATGAATCGAAAGATTCATGTTTGGTTCGGGAAGAGATCATAAAAGTTGTAAACTTACAAAATAATCTACTTTCAT
>ID=gene:ENSRNA049482549;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080233;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold80374:30573-30638(-)
AAAAGCCGTATTCGATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCGAGATCCACCCTAC
>ID=gene:ENSRNA049482551;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080233;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold80374:31332-31409(-)
AGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTGTAGAGTGGCAGTAAGGGTGACTTATCTGTCAACTTTTCC
>ID=gene:ENSRNA049482553;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080233;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold80374:28232-28311(-)
AGGAGCCGTGCGAGATGAAAGTCTCATGCACGGTTTTGAATGAGAGAAAGAAGTGAGGAATCCTCTTTTCGACTCTGAC
>ID=gene:ENSRNA049482556;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080230;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold80374:14749-14789(-)
AGGAGCTGGATGAGAAGAAACTCTCATGTCCGGTTCTGTA
>ID=gene:ENSRNA049482683;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080266;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold184898:5513-5592(+)
AGGAGCCGCGCGAGATGAAAGTCTCATGCACGGTTTTGCATGAGAGAAAGAAGCGAGGAATCCTCTTTTTGACTCTGAC
>ID=gene:ENSRNA049482735;Name=Intron_gpI;biotype=sense_intronic;description=Group I catalytic intron overlaps with ID=2236302;repeat_name=LTR_AC188734.2_15331;repeat_type=LTRs::scaffold166508:3535-3741(-)
CTACGGACTTGATTGTATTGAGCCTTGGTATGGAAACCTGCTAAGTGGTAACTTCCAACTTCAGAGAAACCCTAGAATTAAAAAAGGGCAATCCTGAGCCAAATCCGTGTTTTGAGAAAACAAGGGGTTCTCGAACTAGAATACAAAGGAAAAGGATAGGTGCAGAGACTCAATGGAAGCTGTTCTAACGAATCGAGTTAATTACG
>ID=gene:ENSRNA049482839;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=2080258;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::scaffold132753:5218-5295(+)
AGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTGTAAAGGGACAGTAAGGGTGACTTATCTGTCGACTTTTCC
