>ID=gene:ENSRNA049470189;Name=U5;biotype=snRNA;description=U5 spliceosomal RNA overlaps with ID=47742;repeat_name=LTR_Gm_14_4511;repeat_type=LTRs::13:2207336-2207435(-)
AGCCATGCGGTGAGCACACAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCTCGCCGTTATATGTGGCCTACGCCAGTTTTTGGAGGGG
>ID=gene:ENSRNA049470094;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=14287;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::Un:13971320-13971389(-)
TACAGATAAGATTATCATGACTCATGTGCAAGGATGATACACATAAATCGAGAAATGGTACAACTTTTT
>ID=gene:ENSRNA049470078;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=14286;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::Un:13971803-13971872(+)
TACAAAGAAGATTAGCATGGTCCTTGCGCAAGGATGACACGCACAAATCAAGAAATGGTCCAAATTTTT
>ID=gene:ENSRNA049470012;Name=U1;biotype=snRNA;description=U1 spliceosomal RNA overlaps with ID=36182;repeat_name=LTR_Gm_08_2830;repeat_type=LTRs::18:11278665-11278826(+)
ATACTTACCTGGACGGGGTCTATGGTCGATCATGAAGGATCATGGCCTAGGTAGGCGGTCTCCATTGCACTCAGGAGATGCGCCAGCCTAACATCTCCCCAAGTGGGAGAGTGTACGTCATAATTTGTGACAGCGGGGGCCTGCGTTCGCGCGGCCCCTAC
>ID=gene:ENSRNA049469807;Name=U2;biotype=snRNA;description=U2 spliceosomal RNA overlaps with ID=47774;repeat_name=LTR_Gm_14_4511;repeat_type=LTRs::19:283370-283437(+)
TTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTGG
>ID=gene:ENSRNA049469766;Name=U2;biotype=snRNA;description=U2 spliceosomal RNA overlaps with ID=47771;repeat_name=LTR_Gm_14_4511;repeat_type=LTRs::5:3012580-3012647(+)
TTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTGG
>ID=gene:ENSRNA049469148;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=14288;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::3:5160675-5160778(-)
GTCTCTTCGGAGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTT
>ID=gene:ENSRNA049468949;Name=U1;biotype=snRNA;description=U1 spliceosomal RNA overlaps with ID=36179;repeat_name=LTR_Gm_08_2830;repeat_type=LTRs::13:23066181-23066342(+)
ATACTTACCTGGACGGGGTCTATGGGCGATCGTGCAGACCCATGGCCTAGGCTAGTGACCTCCATTGCACTCTGGAGGTGCACGCGCCTAAGATCTGCCCAAGTGGCGGAGTCTACGTCATAATTTGTGGTAGAGGGGGTTCGCGTGCGCGCGACCCCTAC
>ID=gene:ENSRNA049468772;Name=U1;biotype=snRNA;description=U1 spliceosomal RNA overlaps with ID=36185;repeat_name=LTR_Gm_08_2830;repeat_type=LTRs::14:6260930-6261029(+)
CCATTGCCTAGGATGAGGTGCACCTGCCAACATCTCCCCAAGCAGGAGAGTGTACGGCATAATTTGTGTTAGTGGGGCCTGCGTTCGCCCAGCCCTCCT
>ID=gene:ENSRNA049468674;Name=U2;biotype=snRNA;description=U2 spliceosomal RNA overlaps with ID=47761;repeat_name=LTR_Gm_14_4511;repeat_type=LTRs::18:4033534-4033601(+)
TTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTGG
>ID=gene:ENSRNA049468451;Name=U5;biotype=snRNA;description=U5 spliceosomal RNA overlaps with ID=20818;repeat_name=LTR_Mt_chr_02_74;repeat_type=LTRs::11:6329116-6329167(+)
AGCCGTGTGAGGAGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAA
>ID=gene:ENSRNA049467769;Name=U5;biotype=snRNA;description=U5 spliceosomal RNA overlaps with ID=20806;repeat_name=LTR_Mt_chr_02_74;repeat_type=LTRs::8:18823742-18823793(-)
AGCCGCGCGGTGAGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAA
>ID=gene:ENSRNA049466968;Name=U1;biotype=snRNA;description=U1 spliceosomal RNA overlaps with ID=36183;repeat_name=LTR_Gm_08_2830;repeat_type=LTRs::4:6653714-6653875(-)
ATACTTACCTGGACGGGGTCTATGGTCGATCAACAAGGACTATGGCCTAGGGTAGTGACCTCCATTGCACATAGGAGGGGCACTCCCCTAAGATCTGCCCAAGTGGCAGAGTCTACGTCATAATTTGTGGTAGAGGGGGTTCGCGTCCGCGCGGCCCCTAC
>ID=gene:ENSRNA049466957;Name=U1;biotype=snRNA;description=U1 spliceosomal RNA overlaps with ID=36184;repeat_name=LTR_Gm_08_2830;repeat_type=LTRs::4:6648174-6648335(-)
ATACTTACCTGGACGGGGTGTATGGTCGATCAAGAAGGACCATGGCCTAGAGAAGTGACCTCCATTGCACTCAGGAGGGGCACTGCCCTAAGATCTGCCCAAGTGGCAGAGTCTACGTCATAATTTGTGGTAGAGGGGGTTCGCGTCCGCGCGACCCCTAC
>ID=gene:ENSRNA049466223;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=14282;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::6:15582422-15582525(+)
GTCTCTTCGGAGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTT
>ID=gene:ENSRNA049466209;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=14284;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::6:15577689-15577792(+)
GTCTCTTCAGAGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTT
>ID=gene:ENSRNA049466186;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=14283;repeat_name=LTR_Sb_chr_02_53;repeat_type=LTRs::6:15580292-15580395(+)
GTCTCTTAGGAGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCACAAATCGAGAAATGGTCCAAATTTTT
>ID=gene:ENSRNA049466012;Name=U5;biotype=snRNA;description=U5 spliceosomal RNA overlaps with ID=20817;repeat_name=LTR_Mt_chr_02_74;repeat_type=LTRs::6:18084191-18084242(+)
AGCCACGTGGTGGGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAA
>ID=gene:ENSRNA049466012;Name=U5;biotype=snRNA;description=U5 spliceosomal RNA overlaps with ID=47752;repeat_name=LTR_Gm_14_4511;repeat_type=LTRs::6:18084191-18084309(+)
AGCCACGTGGTGGGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCTCTCCACATTTAGTGGCATACGCTAATTTTTGAAGAGTCCTCTTCTACTAGAGGGCT
>ID=gene:ENSRNA049465998;Name=U5;biotype=snRNA;description=U5 spliceosomal RNA overlaps with ID=47753;repeat_name=LTR_Gm_14_4511;repeat_type=LTRs::6:18080670-18080790(+)
AGTCACGTGGTGAGCACAAAGCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCTCTCCACACTAAGTGGCATACGCTAATTTTTTAAGAGCCCTCTTCTAATCTTGAGGGCT
>ID=gene:ENSRNA049463374;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=65367;repeat_name=LTR_St_chr_01_224;repeat_type=LTRs::4:16410179-16410183(+)
GTCT
>ID=gene:ENSRNA049463374;Name=U6;biotype=snRNA;description=U6 spliceosomal RNA overlaps with ID=217344;repeat_name=VLINE3_VV;repeat_type=Type I Transposons/LINE::4:16410279-16410282(+)
TTT
>ID=gene:ENSRNA049469995;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=1798;repeat_name=LTR_Sl_chr_01_216;repeat_type=LTRs::Un:22393550-22393554(+)
AGGT
>ID=gene:ENSRNA049469995;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=14826;repeat_name=RXX_Gk_DX402720.1_7357;repeat_type=Unknown::Un:22393551-22393666(+)
GGTTTGATCATTCCAACACTAATGCATCAGATTTCAAAACTCAATAGTTAAGCATGCTTGGGCGAGAGTAGTACTAGAATGAGTGACCTTTTAGGTAGTTTTTGTGTTGGAACCC
>ID=gene:ENSRNA049469936;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=23226;repeat_name=LTR_St_chr_02_338;repeat_type=LTRs::Un:22777481-22777527(-)
TTGTCTAAGTGCCGCACGAGCTTAGTAAACAACTAAGTCCGTGACA
>ID=gene:ENSRNA049469936;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=161372;repeat_name=Gypsy9-VV_LTR;repeat_type=LTRs::Un:22777481-22777670(-)
AAAGGCTTTCTTGAGTTAATAGAGCTTCCATTCTTTCAAGAGTTGCCTACCAAGCTTCTTAAGCTTTTGAGTCGCAAGTGTCTTAGCCGAGCAAGCTAAGCATTGGGGATCAAGGCTGACTTAGCAAGATCAAGCGTCTTGACTTGTCTAAGTGCCGCACGAGCTTAGTAAACAACTAAGTCCGTGACA
>ID=gene:ENSRNA049469823;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=81276;repeat_name=LTR_Al_scaffold_0003_561;repeat_type=LTRs::19:137799-138035(-)
CTAATATGTGTGCGAGTCAATAGGCCAGTAAAAACCTGTAAGGCACAAGGAAGTTGATCGGCAGGATCCTCGGGTGCACCATCAACCAACCTTAATCTTATAAGACAGGTTCGAGTGAGAGCATGTCTATCAAAACCTAAAAGATGGTGAAGTATGCCTAAGCAGGGCGAAACTAGAGGAAACTCCGATGGAGGCTTGTAGCGATACTAACATGCAAATTGTTAATTCAACTTAAG
>ID=gene:ENSRNA049469815;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=81276;repeat_name=LTR_Al_scaffold_0003_561;repeat_type=LTRs::19:138045-138488(-)
CCTGTCGTGCTTGAACCCATTCGCACCACAAAGCGTTGTCGGCGAGTCAGGTTGTTTGGGAATGTAGCCCTAATCGGGCAGTAAATTCAATCCAAGGCGAAATATGGGTAAGAGACTAATAGCAAACAAGTATCGTGAGGAAAAAATGAAAAAGATTTTGAAAAAAAAGTCAAAGAGTGTTTGAAATTGTCGAAAAGAAAGTGGATGGGCCGACGGTGCGCCTTGGTCTGATATGGAATGACAACAAGCCAGTCTGCCGATCGACTAGGGCGTGGACCAATGCAATTTAAAGCGATGACCCAAGCTCGGGCTGTTGTCATGCCCATAGAGATATCATTGCCTTGATCATGGAATGCAACATGTGTCGTCTTGGCATGCCTCGACACCTGCATGCTCATGGTGTCAACCCGTAGGCCCCCTATTCGGCCTATTTTGAAACACAG
>ID=gene:ENSRNA049469675;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=14824;repeat_name=RXX_Gk_DX402720.1_7357;repeat_type=Unknown::Un:38134810-38134929(-)
GGGTGTGATCATACCAGCACTAATGCACCGCATCCCATCGGGAGTCCGCAGTTATGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
>ID=gene:ENSRNA049469658;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=14825;repeat_name=RXX_Gk_DX402720.1_7357;repeat_type=Unknown::Un:38133251-38133370(-)
GGGTGTGATCATTCCAGCACTAATGCATCGGATCCCATCAGAACTCCGTAGTGAAGCGTGCTTGGGCGAGAGTGGTACTAGGATGGGTGACCTCCTGGGAAGTCCTCGTGTTGCACCCC
>ID=gene:ENSRNA049469640;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=188948;repeat_name=Gypsy-23_VV-I;repeat_type=LTRs::Un:32614567-32614579(-)
ATCAATGACAGT
>ID=gene:ENSRNA049469358;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=2065;repeat_name=TXX_Ge_DX391571.1_908;repeat_type=Unknown::7:9709848-9709942(+)
ATAACAATACCGGGCTCTTTGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGC
>ID=gene:ENSRNA049469319;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=2065;repeat_name=TXX_Ge_DX391571.1_908;repeat_type=Unknown::7:9709682-9709757(+)
CCTATCAACTTTCGATGGTAGGATAGGGGCCTACTATGGTATTGACGGGTGACGGAGAATTAGGGTTCGATTCCG
>ID=gene:ENSRNA049469239;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=387;repeat_name=RXX_Gr_DX404336.1_7731;repeat_type=Unknown::7:2080532-2080690(-)
TTTCCCTCGGGATAGCTGGAGCCCGCGGGCGAGTTCTATCGGGTAAAGTCAATATTAGAGGCATCGGGGGCGCAATGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCAACTACTCCATTGAGCCGTGCCACGGAATCGAGAGCTCCA
>ID=gene:ENSRNA049469227;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=387;repeat_name=RXX_Gr_DX404336.1_7731;repeat_type=Unknown::7:2080702-2080844(-)
GACCCGAAAGATGGTGATCTATGCCTGAGTGGGGTAAAGCCAAATGAAACTCTAGTGGAGGCCCACAGTGATACTAACGTGCAAATCACTCGTCTGACTTGCATATAGCGGCGAAAGACTAATCGAACCATCTAGTAGCTGG
>ID=gene:ENSRNA049468858;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=45248;repeat_name=LTR_Al_scaffold_0183_279;repeat_type=LTRs::18:24725120-24725322(+)
ACTCTAGTTCGACTTTGTGAAATGACTTTAGGGGGGGTGGGGGTGTAGGATAACTAGAAACGACGAAAGTGAAATACCACTACTTTTAATGTTATTTTTACTTATTCCATGTGTTAGAGAGGTAGGGAGCATCCCCTCATTTTGGACCCAAGGCACATCCATGCGCGTCGATCCTGGTGAAAGACATTGTTAGGTAGAGAGT
>ID=gene:ENSRNA049468852;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=45248;repeat_name=LTR_Al_scaffold_0183_279;repeat_type=LTRs::18:24724891-24725027(+)
TCCTATTGTTTAGCTAAAATAAAGAATTGCAATGGTCCTTGCGGATGCTCACGCAATGTGATTTCTTCCCAGAGGAATGTCAAAGTGAAGAAATCCAACCATCTAATTAGTGACGCGCATGAATGGATTAACAAGA
>ID=gene:ENSRNA049468488;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=81274;repeat_name=LTR_Al_scaffold_0003_561;repeat_type=LTRs::11:6550137-6550298(-)
CACCGCCCATCATTCCTATTGATTAAATGGTCCGGTGAAGTCTTTGGATCACAACAACGTGGGCAGTCTATTGTCCGCACTATCGTGAAAAATCCATTGAACCTTATCATTTAGAGGAAGGAGAAGTCATAACAAGGTTTCTATAGGTGAACCTGTAAAGG
>ID=gene:ENSRNA049468481;Name=5_8S_rRNA;biotype=rRNA;description=5.8S ribosomal RNA overlaps with ID=81275;repeat_name=LTR_Al_scaffold_0003_561;repeat_type=LTRs::11:6549709-6549865(-)
AACTCTCGACAACGAATATCTAGGCTCTCACATCGATAAAGAAAGTAGCAAAATGTGATACTTAGTGTGAATTTCAGAATCTTGTGAATCAACGAATCTTTGAACACAAGTTGCACTTGAAGCCATTAGGTCGAGAGCACACTTGTCTAGGTGTCA
>ID=gene:ENSRNA049467980;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=81273;repeat_name=LTR_Al_scaffold_0003_561;repeat_type=LTRs::15:7997753-7998172(+)
AAGTCGAAAAAATGGATTCGTAACCTCGAGAAAAGGATTGGCTCTAAGGGCTAGGCACAGGAGTCCTAGTCCAGAACCCGTCAACTTTCGATGGACTGCTCGAGCTGCTCCCGTAGCGAGAGTGGGTCATTGCGTGCCGATCGAGGGACGGACTAGGAACAGCTCCCTCGGGGGCCTTTCTTGGGCGTCAAACAATCAACTCAAAACTGGTACAGACAAGGGGAATCCGACTATTTAACTAAAACAAAGCATTGTGATGGTCCCTACGGATGCTCACGCAGTGTGATTTTTGCCCAGTGCTCTAAATGTCAAAGTGAAGAAATTCAACCAAACGTGGGTAAACGGCGAGAGTAACTATGACTCTCTTAAGGTAGCCAAATTCCTCATCATCTAATTAGTGACGTGCATGAATGGATTAA
>ID=gene:ENSRNA049467980;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=157654;repeat_name=Gypsy7-VV_LTR;repeat_type=LTRs::15:7998166-7998181(+)
GATTAATACTCAAAA
>ID=gene:ENSRNA049464293;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=139537;repeat_name=ENSPM-N3_VV;repeat_type=Type II Transposons::17:15751063-15751124(-)
ACTCTATAGTTAAGCGTGCTTAGGCGAGAGTAGTACTAGGATGGGTGACTTACTTGGAAGT
>ID=gene:ENSRNA049464426;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=139535;repeat_name=ENSPM-N3_VV;repeat_type=Type II Transposons::17:15795344-15795408(-)
ACTCCGCAGTTAAGCGCGCTTTTGTGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGTCCA
>ID=gene:ENSRNA049464452;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=139536;repeat_name=ENSPM-N3_VV;repeat_type=Type II Transposons::17:15780982-15781043(-)
ACTTCGTAGTTAAGCTTGCTTGGGTGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGT
>ID=gene:ENSRNA049464591;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=139549;repeat_name=ENSPM-N3_VV;repeat_type=Type II Transposons::17:14232011-14232072(-)
ACTCCGCAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGT
>ID=gene:ENSRNA049464681;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=139531;repeat_name=ENSPM-N3_VV;repeat_type=Type II Transposons::17:15817310-15817371(-)
ACTCCGCAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGT
>ID=gene:ENSRNA049464693;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=139532;repeat_name=ENSPM-N3_VV;repeat_type=Type II Transposons::17:15816086-15816147(-)
ACTCCGCAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGT
>ID=gene:ENSRNA049464713;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=139533;repeat_name=ENSPM-N3_VV;repeat_type=Type II Transposons::17:15801464-15801525(-)
ACTCCGCAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGT
>ID=gene:ENSRNA049464713;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=188319;repeat_name=Gypsy-23_VV-I;repeat_type=LTRs::17:15801562-15801567(-)
GGGTG
>ID=gene:ENSRNA049464732;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=139534;repeat_name=ENSPM-N3_VV;repeat_type=Type II Transposons::17:15800241-15800302(-)
ACTCCGCAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGT
>ID=gene:ENSRNA049464743;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=139550;repeat_name=ENSPM-N3_VV;repeat_type=Type II Transposons::17:14231238-14231299(-)
ACTCCGCAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGT
>ID=gene:ENSRNA049464758;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=139551;repeat_name=ENSPM-N3_VV;repeat_type=Type II Transposons::17:14230457-14230518(-)
ACTCCGCAGTTAAGCGTGCTTGGGCGAGAGTAGTACTAGGATGGGTGACCTCCTGGGAAGT
>ID=gene:ENSRNA049464001;Name=5S_rRNA;biotype=rRNA;description=5S ribosomal RNA overlaps with ID=139548;repeat_name=ENSPM-N3_VV;repeat_type=Type II Transposons::17:13427510-13427578(+)
CATCAAAATTTTGCAGTTAAGTGTGCTTAGGCGAGAGTAGTACTAGGATGGGTGACCTCCTAGGAAGT
>ID=gene:ENSRNA049463398;Name=SSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic small subunit ribosomal RNA overlaps with ID=152891;repeat_name=ENSPM2_VV;repeat_type=Type II Transposons::4:16014443-16014490(-)
AAATTTCTAACCAGTGGGTCTAAGTGTATTTTGTCAAAACCTCAAGG
>ID=gene:ENSRNA049462739;Name=LSU_rRNA_eukarya;biotype=rRNA;description=Eukaryotic large subunit ribosomal RNA overlaps with ID=45254;repeat_name=LTR_Al_scaffold_0183_279;repeat_type=LTRs::5:22145066-22145080(+)
TGCGCCCTTGACGA
>ID=gene:ENSRNA049444670;Name=tRNA-Ser;biotype=tRNA;description=tRNA-Ser for anticodon CGA overlaps with ID=27695;repeat_name=LTR_Al_scaffold_0001_223;repeat_type=LTRs::9:3769660-3769742(+)
GTCGATATGTCCGAGTGGTTAAGGAGACAGACTCGAAATCTGTTGGGCTTTGCCTGCGCAGGTTCGAATCCTGCTGTCGACG
>ID=gene:ENSRNA049444786;Name=tRNA-Asn;biotype=tRNA;description=tRNA-Asn for anticodon GUU overlaps with ID=34382;repeat_name=LTR_Mt_chr_05_619;repeat_type=LTRs::9:3709416-3709490(+)
GCTGGAATAGCTCAGTTGGCTAGAGCGTGTGGCTGTTAACCACAAGGTCGAAGGTTCAAGCCCTTCTTCTAGCG
>ID=gene:ENSRNA049445011;Name=tRNA-Ala;biotype=tRNA;description=tRNA-Ala for anticodon UGC overlaps with ID=29680;repeat_name=LTR_Mt_chr_02_162;repeat_type=LTRs::9:475869-475942(+)
GGGGATGTAGCTCAAACGGTAGAGCGCTCGCTTTGCATGCGAGAGGTACGGGGTTCGATACCCCGCATCTCCA
>ID=gene:ENSRNA049445011;Name=tRNA-Ala;biotype=tRNA;description=tRNA-Ala for anticodon UGC overlaps with ID=29686;repeat_name=LTR_Pp_scaffold_0002_25;repeat_type=LTRs::9:475869-475942(+)
GGGGATGTAGCTCAAACGGTAGAGCGCTCGCTTTGCATGCGAGAGGTACGGGGTTCGATACCCCGCATCTCCA
>ID=gene:ENSRNA049449561;Name=tRNA-Ala;biotype=tRNA;description=tRNA-Ala for anticodon UGC overlaps with ID=18359;repeat_name=LTR_Gm_18_6105;repeat_type=LTRs::14:29793384-29793457(-)
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGCACGGGGTTCGATCCCCCGCATCTCCA
>ID=gene:ENSRNA049449614;Name=tRNA-Ala;biotype=tRNA;description=tRNA-Ala for anticodon AGC overlaps with ID=18368;repeat_name=LTR_Gm_18_6105;repeat_type=LTRs::14:28778099-28778172(+)
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA
>ID=gene:ENSRNA049449684;Name=tRNA-Ala;biotype=tRNA;description=tRNA-Ala for anticodon AGC overlaps with ID=18369;repeat_name=LTR_Gm_18_6105;repeat_type=LTRs::14:28776086-28776159(+)
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA
>ID=gene:ENSRNA049449757;Name=tRNA-Asp;biotype=tRNA;description=tRNA-Asp for anticodon GUC overlaps with ID=16505;repeat_name=LTR_Sl_chr_05_995;repeat_type=LTRs::14:26886625-26886697(+)
GTCGTTGTAGTATAGTGGTGAGTATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCCCCGGCAACGGCG
>ID=gene:ENSRNA049449900;Name=tRNA-Asn;biotype=tRNA;description=tRNA-Asn for anticodon GUU overlaps with ID=34353;repeat_name=LTR_Mt_chr_05_619;repeat_type=LTRs::14:24107635-24107709(+)
GCTGGAATAGCTCAGTTGGTTAGAGCGTGTGGCTGTTAACCACAAGGTCGGAGGTTCAAGCCCTCCTTCTAGCG
>ID=gene:ENSRNA049458471;Name=tRNA-Ala;biotype=tRNA;description=tRNA-Ala for anticodon UGC overlaps with ID=18353;repeat_name=LTR_Gm_18_6105;repeat_type=LTRs::8:20234468-20234541(-)
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGCACGGGGTTCGATCCCCCGCATCTCCA
>ID=gene:ENSRNA049458242;Name=tRNA-Asn;biotype=tRNA;description=tRNA-Asn for anticodon GUU overlaps with ID=34352;repeat_name=LTR_Mt_chr_05_619;repeat_type=LTRs::8:17045257-17045331(+)
GCTGGAATAGCTCAGTTGGCTAGAGCGTGTGGCTGTTAACCACAAGGTCAGAGGTTCAAGCCCTCTTTCTAGCG
>ID=gene:ENSRNA049458194;Name=tRNA-Ser;biotype=tRNA;description=tRNA-Ser for anticodon AGA overlaps with ID=27687;repeat_name=LTR_Al_scaffold_0001_223;repeat_type=LTRs::8:15436112-15436194(+)
GTGGGCGTGCCGGAGTGGTTATCGGGCATGACTAGAAATCATGTGGGCTCTGCCCGCGCAGGTTCGAATCCTGCCGCCCACG
>ID=gene:ENSRNA049458037;Name=tRNA-Ala;biotype=tRNA;description=tRNA-Ala for anticodon AGC overlaps with ID=18388;repeat_name=LTR_Gm_18_6105;repeat_type=LTRs::8:7746809-7746882(+)
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA
>ID=gene:ENSRNA049458037;Name=tRNA-Ala;biotype=tRNA;description=tRNA-Ala for anticodon AGC overlaps with ID=237412;repeat_name=hAT-13_VVi;repeat_type=Type II Transposons::8:7746809-7746882(+)
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA
>ID=gene:ENSRNA049450508;Name=tRNA-Tyr;biotype=tRNA;description=tRNA-Tyr for anticodon GUA overlaps with ID=27688;repeat_name=LTR_Al_scaffold_0001_223;repeat_type=LTRs::7:18229845-18229930(-)
CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGTGTGCAACAGCTATCCTTAGGTCGCTGGTTCGAATCCGGCAGGTCGGA
>ID=gene:ENSRNA049450677;Name=tRNA-Lys;biotype=tRNA;description=tRNA-Lys for anticodon UUU overlaps with ID=184301;repeat_name=Copia-47_VV-I;repeat_type=LTRs::7:13500465-13500538(+)
GCCGTCTTAGCTCAGCCGGTAGAGCGCATGGCTTTTAACCATGTGGTCGTGGGTTCGATTCCCACAGACGGCG
>ID=gene:ENSRNA049450739;Name=tRNA-Phe;biotype=tRNA;description=tRNA-Phe for anticodon GAA overlaps with ID=28183;repeat_name=LTR_Mt_chr_05_582;repeat_type=LTRs::7:4588835-4588908(+)
GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCA
>ID=gene:ENSRNA049450768;Name=tRNA-Ala;biotype=tRNA;description=tRNA-Ala for anticodon UGC overlaps with ID=29674;repeat_name=LTR_Mt_chr_02_162;repeat_type=LTRs::7:4539059-4539132(+)
GGGGATGTAGCTCAAACGGTAGAGCGCTCGCTTTGCATGCGAGAGGTACGGGGTTCGATACCCCGCATCTCCA
>ID=gene:ENSRNA049450851;Name=tRNA-Ala;biotype=tRNA;description=tRNA-Ala for anticodon UGC overlaps with ID=18351;repeat_name=LTR_Gm_18_6105;repeat_type=LTRs::7:2099836-2099909(+)
GGGGATGTAGCTCAAATGGTAGAGCGCTCGCTTTGCATGCGAGAGGTACAGGGTTCGATCCCCTGCATCTCCA
>ID=gene:ENSRNA049450861;Name=tRNA-Ser;biotype=tRNA;description=tRNA-Ser for anticodon UGA overlaps with ID=27691;repeat_name=LTR_Al_scaffold_0001_223;repeat_type=LTRs::7:1945164-1945246(+)
GTCGATATGTCCGAGTGGTTAAGGAGACAGACTTGAAATCTGTTGGGCTTCGCCCGCTCAGGTTCGAACCCTGCTGTCGACG
>ID=gene:ENSRNA049453484;Name=tRNA-Tyr;biotype=tRNA;description=tRNA-Tyr for anticodon GUA overlaps with ID=27692;repeat_name=LTR_Al_scaffold_0001_223;repeat_type=LTRs::13_random:2052201-2052294(-)
CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGTGGGTGTAGATCCAACGGTAATCCTTAGGTCGCTGGTTCGAATCCGGCAGGTCGGA
>ID=gene:ENSRNA049451655;Name=tRNA-Asn;biotype=tRNA;description=tRNA-Asn for anticodon GUU overlaps with ID=34378;repeat_name=LTR_Mt_chr_05_619;repeat_type=LTRs::2:7349131-7349205(+)
GCTGGAATAGCTCAGTTGGTTAGAGCGTGTGGCTGTTAACCACAAGGTCGGAGGTTCAAGCCCTCCTTCTAGCG
>ID=gene:ENSRNA049452076;Name=tRNA-Ala;biotype=tRNA;description=tRNA-Ala for anticodon AGC overlaps with ID=18381;repeat_name=LTR_Gm_18_6105;repeat_type=LTRs::2:596157-596230(+)
GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACGGGGATCGATACCCCGCATCTCCA
>ID=gene:ENSRNA049459361;Name=tRNA-Tyr;biotype=tRNA;description=tRNA-Tyr for anticodon GUA overlaps with ID=27697;repeat_name=LTR_Al_scaffold_0001_223;repeat_type=LTRs::3:1294060-1294152(-)
CCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGTGGGTTTAACCTTATAGTAATCCTTAGGTCACTGGTTCGAATCCGGTAGGTCGGA
>ID=gene:ENSRNA049459229;Name=tRNA-Asn;biotype=tRNA;description=tRNA-Asn for anticodon GUU overlaps with ID=34359;repeat_name=LTR_Mt_chr_05_619;repeat_type=LTRs::3:7222561-7222635(-)
GCTGGAGTAGCTCAGTTGGTTAGAGCGTGTGGCTGTTAACCACAAGGTCGAAGGTTCAAGCCCTTCCTCTAGCG
>ID=gene:ENSRNA049454258;Name=tRNA-Phe;biotype=tRNA;description=tRNA-Phe for anticodon GAA overlaps with ID=28190;repeat_name=LTR_Mt_chr_05_582;repeat_type=LTRs::6:16874200-16874273(-)
GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCA
>ID=gene:ENSRNA049453911;Name=tRNA-Phe;biotype=tRNA;description=tRNA-Phe for anticodon GAA overlaps with ID=28185;repeat_name=LTR_Mt_chr_05_582;repeat_type=LTRs::6:17080198-17080271(+)
GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCA
>ID=gene:ENSRNA049453695;Name=tRNA-Lys;biotype=tRNA;description=tRNA-Lys for anticodon UUU overlaps with ID=36187;repeat_name=LTR_Gm_08_2830;repeat_type=LTRs::6:5754229-5754302(+)
GCCGTCTTAGCTCAGCCGGTAGAGCGCGTGGCTTTTAACCACGTGGTCGTGGGTTCGATTCCCACAGACGGCG
>ID=gene:ENSRNA049453695;Name=tRNA-Lys;biotype=tRNA;description=tRNA-Lys for anticodon UUU overlaps with ID=184588;repeat_name=Copia-47_VV-I;repeat_type=LTRs::6:5754229-5754302(+)
GCCGTCTTAGCTCAGCCGGTAGAGCGCGTGGCTTTTAACCACGTGGTCGTGGGTTCGATTCCCACAGACGGCG
>ID=gene:ENSRNA049457128;Name=tRNA-Ser;biotype=tRNA;description=tRNA-Ser for anticodon AGA overlaps with ID=27690;repeat_name=LTR_Al_scaffold_0001_223;repeat_type=LTRs::19:4184898-4184980(-)
GTGGACGTGCCGGAGTGGTTATCGGGCATGACTAGAAATCATGTGGGCTCTGCCCGCGCAGGTTCGAATCCTGCCGTCCACG
>ID=gene:ENSRNA049457094;Name=tRNA-Phe;biotype=tRNA;description=tRNA-Phe for anticodon GAA overlaps with ID=28189;repeat_name=LTR_Mt_chr_05_582;repeat_type=LTRs::19:6730608-6730681(-)
GCGGGGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCGCGTGTTCGATCCACGCTCACCGCA
>ID=gene:ENSRNA049455045;Name=tRNA-Asp;biotype=tRNA;description=tRNA-Asp for anticodon GUC overlaps with ID=13090;repeat_name=LTR_Gr_chr_11_2758;repeat_type=LTRs::17:3997351-3997423(+)
GTCGTTGTAGTATAGTGGTGAGTATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCCCCGGCAACGGCG
>ID=gene:ENSRNA049456639;Name=tRNA-Ser;biotype=tRNA;description=tRNA-Ser for anticodon CGA overlaps with ID=27694;repeat_name=LTR_Al_scaffold_0001_223;repeat_type=LTRs::4:2956242-2956324(-)
GTCGATATGTCCGAGTGGTTAAGGAGACAGACTCGAAATCTGTTGGGCTTTGCCTGCGCAGGTTCGAATCCTGCTGTCGACG
>ID=gene:ENSRNA049456270;Name=tRNA-Asp;biotype=tRNA;description=tRNA-Asp for anticodon GUC overlaps with ID=13091;repeat_name=LTR_Gr_chr_11_2758;repeat_type=LTRs::4:17595906-17595978(+)
GTCGTTGTAGTATAGTGGTGAGTATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCCCCGGCAACGGCG
>ID=gene:ENSRNA049456170;Name=tRNA-Ser;biotype=tRNA;description=tRNA-Ser for anticodon AGA overlaps with ID=27693;repeat_name=LTR_Al_scaffold_0001_223;repeat_type=LTRs::4:12130614-12130696(+)
GTGGACGTGCCGGAGTGGTTATCGGGCATGACTAGAAATCATGTGGGCTCTGCCCGCGCAGGTTCGAATCCTGCCGTCCACG
>ID=gene:ENSRNA049452347;Name=tRNA-Lys;biotype=tRNA;description=tRNA-Lys for anticodon UUU overlaps with ID=184530;repeat_name=Copia-47_VV-I;repeat_type=LTRs::13:3050081-3050154(+)
GCCGTCTTAGCTCAGCCGGTAGAGCGCGTGGCTTTTAACCACGTGGTCGTGGGTTCGATTCCCACGGACGGCG
>ID=gene:ENSRNA049452543;Name=tRNA-Ile;biotype=tRNA;description=tRNA-Ile for anticodon AAU overlaps with ID=23834;repeat_name=LTR_Al_scaffold_0002_362;repeat_type=LTRs::13:1809158-1809232(+)
GGCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA
>ID=gene:ENSRNA049441947;Name=tRNA-Ile;biotype=tRNA;description=tRNA-Ile for anticodon AAU overlaps with ID=23833;repeat_name=LTR_Al_scaffold_0002_362;repeat_type=LTRs::9:3034119-3034193(-)
GGCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA
>ID=gene:ENSRNA049442024;Name=tRNA-Ile;biotype=tRNA;description=tRNA-Ile for anticodon AAU overlaps with ID=23832;repeat_name=LTR_Al_scaffold_0002_362;repeat_type=LTRs::9:3034279-3034353(-)
GGCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCA
>ID=gene:ENSRNA049442611;Name=tRNA-Asp;biotype=tRNA;description=tRNA-Asp for anticodon GUC overlaps with ID=22209;repeat_name=LTR_Gm_11_3659;repeat_type=LTRs::9:4407892-4407964(-)
GTCGTTGTAGTATAGTGGTGAGTATACCCGCCTGTCACGCGGGTGACCCGGGTTCGATCCCCGGCAACGGCG
>ID=gene:ENSRNA049451198;Name=tRNA-Ala;biotype=tRNA;description=tRNA-Ala for anticodon CGC overlaps with ID=18355;repeat_name=LTR_Gm_18_6105;repeat_type=LTRs::Un:35239451-35239524(+)
GGGGGTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAGGCACGGGGTTCGATTCCCCGCACCTCCA
>ID=gene:ENSRNA049451189;Name=tRNA-Ala;biotype=tRNA;description=tRNA-Ala for anticodon CGC overlaps with ID=18354;repeat_name=LTR_Gm_18_6105;repeat_type=LTRs::Un:35652309-35652382(+)
GGGGGTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAGGCACGGGGTTCGATTCCCCGCACCTCCA
>ID=gene:ENSRNA049451055;Name=tRNA-Lys;biotype=tRNA;description=tRNA-Lys for anticodon UUU overlaps with ID=36180;repeat_name=LTR_Gm_08_2830;repeat_type=LTRs::Un:23779108-23779181(-)
GCCGTCTTAGCTCAGCCGGTAGAGCGCATGGCTTTTAACCATGTGGTCGTGGGTTCGATTCCCACAGACGGCG
>ID=gene:ENSRNA049451055;Name=tRNA-Lys;biotype=tRNA;description=tRNA-Lys for anticodon UUU overlaps with ID=184299;repeat_name=Copia-47_VV-I;repeat_type=LTRs::Un:23779108-23779181(-)
GCCGTCTTAGCTCAGCCGGTAGAGCGCATGGCTTTTAACCATGTGGTCGTGGGTTCGATTCCCACAGACGGCG
>ID=gene:ENSRNA049447045;Name=tRNA-Asn;biotype=tRNA;description=tRNA-Asn for anticodon GUU overlaps with ID=34365;repeat_name=LTR_Mt_chr_05_619;repeat_type=LTRs::18:10809702-10809776(+)
GCTGGAGTAGCTCAGTTGGTTAGAGCGTGTGGCTGTTAACCACAAGGTCGAAGGTTCAAGCCCTTCCTCTAGCG
>ID=gene:ENSRNA049446424;Name=tRNA-Asp;biotype=tRNA;description=tRNA-Asp for anticodon GUC overlaps with ID=13092;repeat_name=LTR_Gr_chr_11_2758;repeat_type=LTRs::18:653153-653225(-)
GTCGTTGTAGTATAGTGGTGAGTATTCCCGCCTGTCACGCGGGTGACCCGGGTTCGATCCCCGGCAACGGCG
>ID=gene:ENSRNA049455791;Name=tRNA-Tyr;biotype=tRNA;description=tRNA-Tyr for anticodon GUA overlaps with ID=27689;repeat_name=LTR_Al_scaffold_0001_223;repeat_type=LTRs::15:19102801-19102884(-)
CCGGCTTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGTATGGCTGTGATCCTTAGGTCGCTGGTTCGAATCCGGCAAGCCGGA
>ID=gene:ENSRNA049455859;Name=tRNA-Ala;biotype=tRNA;description=tRNA-Ala for anticodon CGC overlaps with ID=29676;repeat_name=LTR_Mt_chr_02_162;repeat_type=LTRs::15:17431229-17431302(-)
GGGGGTGTAGCTCATATGGTAGAGCGCTCGCTTCGCATGCGAGAGGCACGGGGTTCGATTCCCCGCACCTCCA
>ID=gene:ENSRNA049469773;Name=mir-166;biotype=pre_miRNA;description=mir-166 microRNA precursor overlaps with ID=18743;repeat_name=LTR_Gm_20_6852;repeat_type=LTRs::5:6741277-6741283(-)
GTTGAG
>ID=gene:ENSRNA049469773;Name=mir-166;biotype=pre_miRNA;description=mir-166 microRNA precursor overlaps with ID=18755;repeat_name=DTC_Jorge_3B_011_O13-1;repeat_type=Type II Transposons::5:6741258-6741283(-)
GTTGAGGGGAACGCTGTCTGGTTCG
>ID=gene:ENSRNA049463860;Name=MIR159;biotype=pre_miRNA;description=microRNA MIR159 overlaps with ID=2396;repeat_name=LTR_Os_chr_01_31;repeat_type=LTRs::15:18469184-18469357(-)
GGAGCTCCTTTACGCTCCAGTTCTGAAAGGAGATGATGGTATCCACAGCTGCTGGTTCATGAGTACCTATGGCTGCACAATATATATAGCAATGTTGTGTGCAAACTATGGGTGTGCATGACCTCGGAGAAGTGGTTGCCTTGATCTTTCTGGCCTTGGAGTGAAGGGAGCTC
>ID=gene:ENSRNA049463848;Name=MIR159;biotype=pre_miRNA;description=microRNA MIR159 overlaps with ID=2395;repeat_name=LTR_Os_chr_01_31;repeat_type=LTRs::15:18473296-18473469(-)
GGAGCTCTCTTTGCTCCTAGCTAGAAGGAGATGAGGGTATGCCACAGCTGCCAGTTCATGAATGCCCATGGATGCTCAAGTTCTAGCATATGGTGAGAGCAAGCTATGGGTGAGCATGACTTGGGAGATGAGGGTACTTTGATCTTTCTGGTATTGGAGTGAAGGGAGCTCTA
>ID=gene:ENSRNA049463820;Name=MIR159;biotype=pre_miRNA;description=microRNA MIR159 overlaps with ID=2397;repeat_name=LTR_Os_chr_01_31;repeat_type=LTRs::15:18466308-18466474(-)
AGCTGCCTTCATCCCAAAATCAAAAGAGTAGAAGGTGTTACATCTGCTGGTTCATGGATACCTTTGTAGTGTACAGATTAATATATCTAATGTCCACTTTAAGGGTTTGCATGAATGGGGAGATGAGGTTGCCTTCTTCACTTATAATTTGGTTTGAAGGGAGCTC
>ID=gene:ENSRNA049463803;Name=MIR159;biotype=pre_miRNA;description=microRNA MIR159 overlaps with ID=2398;repeat_name=LTR_Os_chr_01_31;repeat_type=LTRs::15:18463081-18463248(-)
GAGCTGCCTTCATTCCAAATTCAAAAGAGTAGAGGGTGTTACATCTGCTGGTTCATGGATACCTTTGTAGTGTACATATTAATATATCTAATGTCAACTTTAAGGGTTTGCATGAATGGGGAGATGAGGTTGCCTTCTTCACTTGTAATTTGGTTTGAAGGGTGCTC
>ID=gene:ENSRNA049463777;Name=MIR159;biotype=pre_miRNA;description=microRNA MIR159 overlaps with ID=2399;repeat_name=LTR_Os_chr_01_31;repeat_type=LTRs::15:18461460-18461626(-)
AGCTGCCCTCATTCCAAATTCAAAAGAGTAGAAGGTGTTACATCTGCTGGTTCATGGATACCTTTGTAGTGTACAGATTAATATATCCAATGTCCCCTTTAAGGGTTTGCATGAATGGGGAGATGAGGTTTCCTTCTTGACTTGTAATTTGGTTTGAAGGGAGCTC
>ID=gene:ENSRNA049470361;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=162992;repeat_name=Copia17-VV_I-int;repeat_type=LTRs::19:10186829-10186846(-)
AGAGATGTCGTTTTGGC
>ID=gene:ENSRNA049469758;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=7830;repeat_name=LTR_AC198290.2_10424;repeat_type=LTRs::3:18941940-18942025(+)
CCTAAATCTGGAGGGCACCGCGTGATGCTGGTTTCACAGAGCAGCGTTCACCTCCCGCTCTCTTCGGTGGAAGGATAACGGGCCG
>ID=gene:ENSRNA049469758;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=72985;repeat_name=ARSiTERT00100011;repeat_type=LTRs::3:18941925-18942021(+)
GGCCTGGCTGGGGTTCCTAAATCTGGAGGGCACCGCGTGATGCTGGTTTCACAGAGCAGCGTTCACCTCCCGCTCTCTTCGGTGGAAGGATAACGG
>ID=gene:ENSRNA049469758;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=128988;repeat_name=Copia-85_VV-I;repeat_type=LTRs::3:18941822-18942050(+)
GGCGGCGCCGGCAATGGCGCCTGGACTGCTCCTGAATCCGGCGAGATGGCACCTTCAGCGCGAGCTTGTAACTCAAGCGAGGGCATCAGTGCGGCTGGAGATTGGCCTGGCTGGGGTTCCTAAATCTGGAGGGCACCGCGTGATGCTGGTTTCACAGAGCAGCGTTCACCTCCCGCTCTCTTCGGTGGAAGGATAACGGGCCGGGACCCCTCAAGCCCAACAAACGCC
>ID=gene:ENSRNA049469019;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=7832;repeat_name=LTR_AC198290.2_10424;repeat_type=LTRs::12:3359301-3359432(-)
AGTAGCGAGAGTTTGTGACTCAAGCGAGGGCATCAGTGTGGTTGGAGATTGGTCTGGCTGGGTTGGTAAGGCCTGATGGGGTAATTGGCCTGGTTCGCCCATTCCAAGTGGGGAGTTGAGCCCCGCGATCC
>ID=gene:ENSRNA049469019;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=72991;repeat_name=ARSiTERT00100011;repeat_type=LTRs::12:3359195-3359301(-)
GGGCGAAAGTCTGGGTCTTAGGGTTCTTAGAGATGGAGGGCACCGCGTGAGGCTGGTTTCACAGAGCAGCGTTCACTTCCCGCTCTCTTCGGTGGAAGGATAACGG
>ID=gene:ENSRNA049469013;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=72992;repeat_name=ARSiTERT00100011;repeat_type=LTRs::12:3271030-3271193(+)
CGAAGGGTTGGGGAACGTGGTTCCTAGAGTGGAGGGCACCGCGTGAGGCTGGGCTCACAGAGCAGCGTTCACCTCCCGCTCCCCTCGGTGGAAGGACAACGAGCCGGTACTCCACGGGCCCAACGATACCTCCTCAGCCGCTCTCAACCCGACAACCACTTTT
>ID=gene:ENSRNA049469002;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=7831;repeat_name=LTR_AC198290.2_10424;repeat_type=LTRs::12:3362197-3362335(-)
GCCGAGCTCAGCAGCGCGAGCTTGTAACTCAAGCGAGGGCGTTAGTGTGGTTGGAGATTGGCCTGGCTGGGTTGGTAGGGCTTGGTGGGGTGATTTAACTGGCTTGCCCGTTCCAAGTAGGGAGTTGTGCCCCGATAT
>ID=gene:ENSRNA049469002;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=72990;repeat_name=ARSiTERT00100011;repeat_type=LTRs::12:3362028-3362197(-)
TCGGGCTAAGGCCTGGGTGTTTGGGTTCCTAAAGCTGGAGGGCACCGCGTGAGGCTGGTTTCACAGAGCAGCGTTCACCTCCCGCTCTCTTCGGTGGATGGACAACGGGCCGGGACCCTTCAAGCCCAACAACGCCTACCCAGCCTCTCTCAACCCGACAACCACATTT
>ID=gene:ENSRNA049468995;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=72996;repeat_name=ARSiTERT00100011;repeat_type=LTRs::12:1696085-1696253(-)
GATCGAAGGATTGGGTGGCATGGTTCCTAAAGCGAGGAGGGCACCGCGTGAGGCTGGCTTCACAGAGCAGCGTTCACCTCCCGCTCTCTTCGGTGGAAGGATAACGAGCCAGTACTCCACAGGCCCAACGACGCCTCCTCAGCCGCTCTCAACCCAACAACCACCTTT
>ID=gene:ENSRNA049468741;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=162980;repeat_name=Copia17-VV_I-int;repeat_type=LTRs::8:1435844-1435866(+)
TCACAATTTGACATCCACCTTT
>ID=gene:ENSRNA049467595;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=72982;repeat_name=ARSiTERT00100011;repeat_type=LTRs::10:7915137-7915217(+)
CGAAGGCTTGGGTGGCGTGGCTCCTAGAGTGGCGGAGTTCGCGTGAGGCTGGCTTCACAAAGCAGCGTCCACCTCCTGCT
>ID=gene:ENSRNA049462374;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=72993;repeat_name=ARSiTERT00100011;repeat_type=LTRs::12:3260437-3260603(+)
GACCGAAGGGTTGGGTGACGTGGTTCCTAGAGTGGAGGGCACCGCGTGAGGCTGGATTCACAGAGCAGCGTTCACCTCCCGCTCCCTTCGGTGGAAGGATAACGTGCTGGTACTCCACGGGCCCAACGACGCCTCCTCAGCCGCTCACAACCCGACAACCACTTTT
>ID=gene:ENSRNA049462688;Name=Plant_SRP;biotype=SRP_RNA;description=Plant signal recognition particle RNA overlaps with ID=128964;repeat_name=Copia-85_VV-I;repeat_type=LTRs::7_random:1279989-1280295(-)
TCGCGCCTGAACTGGCGCGTGAAACCTGGAGAAACGGCGCCTTCAATGGCACCGGCAATGACGCCTGGACTGGCGCCTGAATCTGGCGAGATGGCACATTCAGCGCGAGCTTGTAACTCAAGCGAGAGCATCAGTGCGGCTGGAGATTGGCCTGGCTGGGGTTCCTAAATCTGGAGGGCACCGCGTGAGGCTGGTTTCACAGAGCAGCGTTCACCTCCCGCTCTCTTCGGTGGAAGGATAACGGGCCGGGACCCCTCAAGCCCAACAAACGCCTACCCAGCCTCTCTCAACCCAACAACCACATTT
>ID=gene:ENSRNA049467050;Name=Plant_U3;biotype=snoRNA;description=Plant small nucleolar RNA U3 overlaps with ID=129036;repeat_name=Copia-85_VV-I;repeat_type=LTRs::2:9039248-9039411(+)
AAAATTATTCTATAGATTGTACCTCTGTATCCTTGAGTTCTAAGGAGACAGGAACTAGATCTGAGCGTGATTGACCGTTTGATGATCTTTGGGTCAGCACACAGTAGAGGATCATTCCAGGTTAGGTCCTCCCTGGCTTGGGTGATCATGCGGATTGTCTGAC
>ID=gene:ENSRNA049469952;Name=IsrR;biotype=antisense_RNA;description=Antisense RNA which regulates isiA expression overlaps with ID=47604;repeat_name=LTR_Gr_chr_04_953;repeat_type=LTRs::Un:27320084-27320265(-)
AATAACCAAATATAACACTTGGGCTAAGGGTCAAGTTGGTAATTTTTCTTAACCCTCCGGGAGCCCAGGTATCATATACGCCCCCAAAATAAAGAGCCTTGAATACTAGAAGAAAAACACCTATACCTAACAAGATTAAGTGAATACCAAAAATTGTGGTCATTATCTTTCTATCTTTCCA
>ID=gene:ENSRNA049469925;Name=IsrR;biotype=antisense_RNA;description=Antisense RNA which regulates isiA expression overlaps with ID=88373;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::5:11026137-11026177(-)
GACGGTGTCTGAGGCTTCTTGAAAAACGTGATATCTCACA
>ID=gene:ENSRNA049468342;Name=IsrR;biotype=antisense_RNA;description=Antisense RNA which regulates isiA expression overlaps with ID=47605;repeat_name=LTR_Gr_chr_04_953;repeat_type=LTRs::9:18478005-18478115(-)
AATAACCAAATATAATATTTAGGCTAAGGGTCAGGTTGGTAATTTTTCTTATATCTCCCCCTCAAGAAGCCCAAATGCAATATACACCCCAAAATAAAGAGCCTTGAATT
>ID=gene:ENSRNA049465757;Name=IsrR;biotype=antisense_RNA;description=Antisense RNA which regulates isiA expression overlaps with ID=47602;repeat_name=LTR_Gr_chr_04_953;repeat_type=LTRs::10:10947867-10948022(-)
AATAATAAAATTTACCCCTGGGGTTAAGGGTCAAGTGGGAAATTTTTTTTACTTTTTCCCCCAGGGGGGGCCCCCCCCCCCCCCCCCCCTCCAAAATACAGAACCTTGAATATTAAAAGAAGAACACCTCTACCTAATCAGATTAAGTGAATACC
>ID=gene:ENSRNA049462840;Name=IsrR;biotype=antisense_RNA;description=Antisense RNA which regulates isiA expression overlaps with ID=47606;repeat_name=LTR_Gr_chr_04_953;repeat_type=LTRs::5:20440089-20440217(-)
CCTCCGGGAGCCCAGGTATCAGATACACCCCCAAAATAAAGAGCCTTGAATACTTGAAGAAAAACACCTATACCTAACAAGATTAAGTGAATACCCAAAATTGTGGTCATTTTCTTTTTATCTTTCCA
>ID=gene:ENSRNA049465323;Name=Intron_gpII;biotype=sense_intronic;description=Group II catalytic intron overlaps with ID=88299;repeat_name=LTR_Al_scaffold_0002_336;repeat_type=LTRs::2:11720137-11720211(-)
GAAAGCTGTATTCGATGAAAGTCGTATGTACGGCTTGGAGGGAGATCTTTCATGTCTTTCGAGATCCACCCTAC
